Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0346:0281
Extra
PDB:
ATOM 1 O3' A A 345 56.965 125.186 12.546 1.00 75.09 O
ATOM 2 P G A 346 58.354 125.497 13.290 1.00 75.86 P
ATOM 3 OP1 G A 346 58.751 124.296 14.062 1.00 76.20 O
ATOM 4 OP2 G A 346 58.212 126.803 13.980 1.00 75.96 O
ATOM 5 O5' G A 346 59.399 125.643 12.097 1.00 77.76 O
ATOM 6 C5' G A 346 59.053 126.377 10.909 1.00 78.77 C
ATOM 7 C4' G A 346 58.607 125.429 9.817 1.00 79.33 C
ATOM 8 O4' G A 346 57.815 126.161 8.845 1.00 78.89 O
ATOM 9 C3' G A 346 59.697 124.719 9.017 1.00 79.29 C
ATOM 10 O3' G A 346 59.127 123.464 8.595 1.00 80.55 O
ATOM 11 C2' G A 346 59.887 125.693 7.855 1.00 79.11 C
ATOM 12 O2' G A 346 60.507 125.156 6.705 1.00 80.31 O
ATOM 13 C1' G A 346 58.434 126.081 7.579 1.00 79.22 C
ATOM 14 N9 G A 346 58.200 127.342 6.886 1.00 78.83 N
ATOM 15 C8 G A 346 59.063 128.403 6.736 1.00 79.84 C
ATOM 16 N7 G A 346 58.538 129.401 6.078 1.00 80.06 N
ATOM 17 C5 G A 346 57.255 128.970 5.771 1.00 79.66 C
ATOM 18 C6 G A 346 56.212 129.623 5.070 1.00 80.10 C
ATOM 19 O6 G A 346 56.214 130.754 4.564 1.00 81.51 O
ATOM 20 N1 G A 346 55.075 128.823 4.986 1.00 79.60 N
ATOM 21 C2 G A 346 54.955 127.559 5.511 1.00 78.26 C
ATOM 22 N2 G A 346 53.775 126.949 5.328 1.00 76.65 N
ATOM 23 N3 G A 346 55.920 126.940 6.166 1.00 77.99 N
ATOM 24 C4 G A 346 57.034 127.700 6.258 1.00 78.76 C
ATOM 25 P U A 347 60.020 122.365 7.820 1.00 80.97 P
ATOM 26 OP1 U A 347 61.353 122.216 8.472 1.00 80.71 O
ATOM 27 OP2 U A 347 59.943 122.689 6.370 1.00 81.94 O
ATOM 28 O5' U A 347 59.196 121.012 8.013 1.00 80.48 O
TER
ATOM 1 O3' G B 280 51.150 127.638 2.320 1.00 82.51 O
ATOM 2 P A B 281 50.958 128.467 3.687 1.00 84.79 P
ATOM 3 OP1 A B 281 49.658 129.190 3.587 1.00 84.21 O
ATOM 4 OP2 A B 281 52.205 129.234 3.959 1.00 83.37 O
ATOM 5 O5' A B 281 50.828 127.329 4.797 1.00 83.83 O
ATOM 6 C5' A B 281 49.589 127.102 5.501 1.00 81.18 C
ATOM 7 C4' A B 281 48.670 126.232 4.674 1.00 80.59 C
ATOM 8 O4' A B 281 49.413 125.113 4.123 1.00 79.83 O
ATOM 9 C3' A B 281 47.534 125.582 5.444 1.00 80.88 C
ATOM 10 O3' A B 281 46.436 126.463 5.650 1.00 81.94 O
ATOM 11 C2' A B 281 47.202 124.377 4.575 1.00 80.17 C
ATOM 12 O2' A B 281 46.431 124.698 3.434 1.00 79.58 O
ATOM 13 C1' A B 281 48.603 123.946 4.138 1.00 79.63 C
ATOM 14 N9 A B 281 49.211 122.990 5.064 1.00 79.32 N
ATOM 15 C8 A B 281 50.398 123.117 5.751 1.00 79.27 C
ATOM 16 N7 A B 281 50.683 122.087 6.510 1.00 78.97 N
ATOM 17 C5 A B 281 49.615 121.221 6.312 1.00 78.43 C
ATOM 18 C6 A B 281 49.324 119.945 6.827 1.00 77.69 C
ATOM 19 N6 A B 281 50.116 119.290 7.680 1.00 76.07 N
ATOM 20 N1 A B 281 48.175 119.355 6.426 1.00 77.65 N
ATOM 21 C2 A B 281 47.383 120.009 5.564 1.00 77.26 C
ATOM 22 N3 A B 281 47.549 121.207 5.009 1.00 77.63 N
ATOM 23 C4 A B 281 48.699 121.766 5.427 1.00 78.62 C
ATOM 24 P C B 282 45.565 126.342 6.997 1.00 82.96 P
ATOM 25 OP1 C B 282 44.805 127.609 7.161 1.00 82.43 O
ATOM 26 OP2 C B 282 46.463 125.875 8.091 1.00 82.81 O
ATOM 27 O5' C B 282 44.528 125.176 6.675 1.00 83.63 O
TER
ATOM 2 P G A 346 58.354 125.497 13.290 1.00 75.86 P
ATOM 3 OP1 G A 346 58.751 124.296 14.062 1.00 76.20 O
ATOM 4 OP2 G A 346 58.212 126.803 13.980 1.00 75.96 O
ATOM 5 O5' G A 346 59.399 125.643 12.097 1.00 77.76 O
ATOM 6 C5' G A 346 59.053 126.377 10.909 1.00 78.77 C
ATOM 7 C4' G A 346 58.607 125.429 9.817 1.00 79.33 C
ATOM 8 O4' G A 346 57.815 126.161 8.845 1.00 78.89 O
ATOM 9 C3' G A 346 59.697 124.719 9.017 1.00 79.29 C
ATOM 10 O3' G A 346 59.127 123.464 8.595 1.00 80.55 O
ATOM 11 C2' G A 346 59.887 125.693 7.855 1.00 79.11 C
ATOM 12 O2' G A 346 60.507 125.156 6.705 1.00 80.31 O
ATOM 13 C1' G A 346 58.434 126.081 7.579 1.00 79.22 C
ATOM 14 N9 G A 346 58.200 127.342 6.886 1.00 78.83 N
ATOM 15 C8 G A 346 59.063 128.403 6.736 1.00 79.84 C
ATOM 16 N7 G A 346 58.538 129.401 6.078 1.00 80.06 N
ATOM 17 C5 G A 346 57.255 128.970 5.771 1.00 79.66 C
ATOM 18 C6 G A 346 56.212 129.623 5.070 1.00 80.10 C
ATOM 19 O6 G A 346 56.214 130.754 4.564 1.00 81.51 O
ATOM 20 N1 G A 346 55.075 128.823 4.986 1.00 79.60 N
ATOM 21 C2 G A 346 54.955 127.559 5.511 1.00 78.26 C
ATOM 22 N2 G A 346 53.775 126.949 5.328 1.00 76.65 N
ATOM 23 N3 G A 346 55.920 126.940 6.166 1.00 77.99 N
ATOM 24 C4 G A 346 57.034 127.700 6.258 1.00 78.76 C
ATOM 25 P U A 347 60.020 122.365 7.820 1.00 80.97 P
ATOM 26 OP1 U A 347 61.353 122.216 8.472 1.00 80.71 O
ATOM 27 OP2 U A 347 59.943 122.689 6.370 1.00 81.94 O
ATOM 28 O5' U A 347 59.196 121.012 8.013 1.00 80.48 O
TER
ATOM 1 O3' G B 280 51.150 127.638 2.320 1.00 82.51 O
ATOM 2 P A B 281 50.958 128.467 3.687 1.00 84.79 P
ATOM 3 OP1 A B 281 49.658 129.190 3.587 1.00 84.21 O
ATOM 4 OP2 A B 281 52.205 129.234 3.959 1.00 83.37 O
ATOM 5 O5' A B 281 50.828 127.329 4.797 1.00 83.83 O
ATOM 6 C5' A B 281 49.589 127.102 5.501 1.00 81.18 C
ATOM 7 C4' A B 281 48.670 126.232 4.674 1.00 80.59 C
ATOM 8 O4' A B 281 49.413 125.113 4.123 1.00 79.83 O
ATOM 9 C3' A B 281 47.534 125.582 5.444 1.00 80.88 C
ATOM 10 O3' A B 281 46.436 126.463 5.650 1.00 81.94 O
ATOM 11 C2' A B 281 47.202 124.377 4.575 1.00 80.17 C
ATOM 12 O2' A B 281 46.431 124.698 3.434 1.00 79.58 O
ATOM 13 C1' A B 281 48.603 123.946 4.138 1.00 79.63 C
ATOM 14 N9 A B 281 49.211 122.990 5.064 1.00 79.32 N
ATOM 15 C8 A B 281 50.398 123.117 5.751 1.00 79.27 C
ATOM 16 N7 A B 281 50.683 122.087 6.510 1.00 78.97 N
ATOM 17 C5 A B 281 49.615 121.221 6.312 1.00 78.43 C
ATOM 18 C6 A B 281 49.324 119.945 6.827 1.00 77.69 C
ATOM 19 N6 A B 281 50.116 119.290 7.680 1.00 76.07 N
ATOM 20 N1 A B 281 48.175 119.355 6.426 1.00 77.65 N
ATOM 21 C2 A B 281 47.383 120.009 5.564 1.00 77.26 C
ATOM 22 N3 A B 281 47.549 121.207 5.009 1.00 77.63 N
ATOM 23 C4 A B 281 48.699 121.766 5.427 1.00 78.62 C
ATOM 24 P C B 282 45.565 126.342 6.997 1.00 82.96 P
ATOM 25 OP1 C B 282 44.805 127.609 7.161 1.00 82.43 O
ATOM 26 OP2 C B 282 46.463 125.875 8.091 1.00 82.81 O
ATOM 27 O5' C B 282 44.528 125.176 6.675 1.00 83.63 O
TER
Atoms:
OP1: (58.751,124.296,14.062)
OP2: (58.212,126.803,13.980)
C3': (59.697,124.719,9.017)
C1': (58.434,126.081,7.579)
C5': (59.053,126.377,10.909)
O6: (56.214,130.754,4.564)
O4': (57.815,126.161,8.845)
C8: (59.063,128.403,6.736)
C2: (54.955,127.559,5.511)
C6: (56.212,129.623,5.070)
C5: (57.255,128.970,5.771)
C4: (57.034,127.700,6.258)
P: (58.354,125.497,13.290)
C4': (58.607,125.429,9.817)
C2': (59.887,125.693,7.855)
O2': (60.507,125.156,6.705)
N1: (55.075,128.823,4.986)
N2: (53.775,126.949,5.328)
N3: (55.920,126.940,6.166)
N7: (58.538,129.401,6.078)
N9: (58.200,127.342,6.886)
O5': (59.399,125.643,12.097)
O3': (59.127,123.464,8.595)
OP2: (58.212,126.803,13.980)
C3': (59.697,124.719,9.017)
C1': (58.434,126.081,7.579)
C5': (59.053,126.377,10.909)
O6: (56.214,130.754,4.564)
O4': (57.815,126.161,8.845)
C8: (59.063,128.403,6.736)
C2: (54.955,127.559,5.511)
C6: (56.212,129.623,5.070)
C5: (57.255,128.970,5.771)
C4: (57.034,127.700,6.258)
P: (58.354,125.497,13.290)
C4': (58.607,125.429,9.817)
C2': (59.887,125.693,7.855)
O2': (60.507,125.156,6.705)
N1: (55.075,128.823,4.986)
N2: (53.775,126.949,5.328)
N3: (55.920,126.940,6.166)
N7: (58.538,129.401,6.078)
N9: (58.200,127.342,6.886)
O5': (59.399,125.643,12.097)
O3': (59.127,123.464,8.595)
OP1: (49.658,129.190,3.587)
OP2: (52.205,129.234,3.959)
C3': (47.534,125.582,5.444)
C1': (48.603,123.946,4.138)
C5': (49.589,127.102,5.501)
O4': (49.413,125.113,4.123)
C8: (50.398,123.117,5.751)
O2': (46.431,124.698,3.434)
C6: (49.324,119.945,6.827)
C5: (49.615,121.221,6.312)
C4: (48.699,121.766,5.427)
P: (50.958,128.467,3.687)
C4': (48.670,126.232,4.674)
C2': (47.202,124.377,4.575)
C2: (47.383,120.009,5.564)
N1: (48.175,119.355,6.426)
N3: (47.549,121.207,5.009)
N6: (50.116,119.290,7.680)
N7: (50.683,122.087,6.510)
N9: (49.211,122.990,5.064)
O5': (50.828,127.329,4.797)
O3': (46.436,126.463,5.650)
OP2: (52.205,129.234,3.959)
C3': (47.534,125.582,5.444)
C1': (48.603,123.946,4.138)
C5': (49.589,127.102,5.501)
O4': (49.413,125.113,4.123)
C8: (50.398,123.117,5.751)
O2': (46.431,124.698,3.434)
C6: (49.324,119.945,6.827)
C5: (49.615,121.221,6.312)
C4: (48.699,121.766,5.427)
P: (50.958,128.467,3.687)
C4': (48.670,126.232,4.674)
C2': (47.202,124.377,4.575)
C2: (47.383,120.009,5.564)
N1: (48.175,119.355,6.426)
N3: (47.549,121.207,5.009)
N6: (50.116,119.290,7.680)
N7: (50.683,122.087,6.510)
N9: (49.211,122.990,5.064)
O5': (50.828,127.329,4.797)
O3': (46.436,126.463,5.650)
Image (generated by PyMOL):