Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0346:0281
Extra
PDB:
ATOM 1 O3' A A 345 56.742 124.537 12.502 1.00 55.75 O
ATOM 2 P G A 346 58.089 124.976 13.261 1.00 56.43 P
ATOM 3 OP1 G A 346 58.520 123.877 14.159 1.00 57.57 O
ATOM 4 OP2 G A 346 57.863 126.331 13.814 1.00 56.04 O
ATOM 5 O5' G A 346 59.156 125.070 12.084 1.00 58.39 O
ATOM 6 C5' G A 346 58.837 125.775 10.874 1.00 61.44 C
ATOM 7 C4' G A 346 58.352 124.810 9.815 1.00 63.41 C
ATOM 8 O4' G A 346 57.560 125.535 8.838 1.00 63.74 O
ATOM 9 C3' G A 346 59.418 124.068 9.015 1.00 64.04 C
ATOM 10 O3' G A 346 58.835 122.812 8.624 1.00 65.35 O
ATOM 11 C2' G A 346 59.611 125.015 7.832 1.00 63.83 C
ATOM 12 O2' G A 346 60.212 124.438 6.693 1.00 65.19 O
ATOM 13 C1' G A 346 58.162 125.425 7.567 1.00 62.81 C
ATOM 14 N9 G A 346 57.931 126.681 6.863 1.00 61.05 N
ATOM 15 C8 G A 346 58.789 127.741 6.708 1.00 61.54 C
ATOM 16 N7 G A 346 58.256 128.737 6.053 1.00 62.12 N
ATOM 17 C5 G A 346 56.973 128.302 5.754 1.00 60.74 C
ATOM 18 C6 G A 346 55.921 128.950 5.065 1.00 62.16 C
ATOM 19 O6 G A 346 55.906 130.084 4.570 1.00 63.94 O
ATOM 20 N1 G A 346 54.792 128.141 4.982 1.00 62.35 N
ATOM 21 C2 G A 346 54.688 126.875 5.500 1.00 61.10 C
ATOM 22 N2 G A 346 53.518 126.253 5.315 1.00 61.84 N
ATOM 23 N3 G A 346 55.658 126.264 6.150 1.00 60.19 N
ATOM 24 C4 G A 346 56.764 127.031 6.239 1.00 60.27 C
ATOM 25 P U A 347 59.692 121.731 7.792 1.00 65.55 P
ATOM 26 OP1 U A 347 61.051 121.607 8.380 1.00 65.48 O
ATOM 27 OP2 U A 347 59.542 122.062 6.354 1.00 66.41 O
ATOM 28 O5' U A 347 58.900 120.365 8.012 1.00 65.07 O
TER
ATOM 1 O3' G B 280 50.998 127.015 2.239 1.00 60.84 O
ATOM 2 P A B 281 50.787 127.829 3.609 1.00 62.60 P
ATOM 3 OP1 A B 281 49.484 128.542 3.488 1.00 61.96 O
ATOM 4 OP2 A B 281 52.021 128.606 3.901 1.00 60.97 O
ATOM 5 O5' A B 281 50.664 126.673 4.703 1.00 61.26 O
ATOM 6 C5' A B 281 49.431 126.433 5.417 1.00 59.91 C
ATOM 7 C4' A B 281 48.516 125.547 4.603 1.00 59.50 C
ATOM 8 O4' A B 281 49.275 124.442 4.042 1.00 60.69 O
ATOM 9 C3' A B 281 47.395 124.868 5.374 1.00 58.81 C
ATOM 10 O3' A B 281 46.278 125.716 5.598 1.00 58.99 O
ATOM 11 C2' A B 281 47.072 123.679 4.481 1.00 58.91 C
ATOM 12 O2' A B 281 46.298 124.024 3.350 1.00 57.09 O
ATOM 13 C1' A B 281 48.474 123.268 4.029 1.00 59.47 C
ATOM 14 N9 A B 281 49.080 122.300 4.941 1.00 60.05 N
ATOM 15 C8 A B 281 50.252 122.430 5.648 1.00 60.24 C
ATOM 16 N7 A B 281 50.535 121.394 6.397 1.00 60.65 N
ATOM 17 C5 A B 281 49.482 120.519 6.168 1.00 60.33 C
ATOM 18 C6 A B 281 49.195 119.233 6.664 1.00 60.06 C
ATOM 19 N6 A B 281 49.978 118.581 7.530 1.00 58.32 N
ATOM 20 N1 A B 281 48.064 118.633 6.231 1.00 59.81 N
ATOM 21 C2 A B 281 47.283 119.287 5.361 1.00 59.67 C
ATOM 22 N3 A B 281 47.445 120.494 4.825 1.00 59.83 N
ATOM 23 C4 A B 281 48.578 121.064 5.274 1.00 60.16 C
ATOM 24 P C B 282 45.356 125.487 6.897 1.00 60.78 P
ATOM 25 OP1 C B 282 44.504 126.696 7.054 1.00 59.42 O
ATOM 26 OP2 C B 282 46.231 125.055 8.022 1.00 60.51 O
ATOM 27 O5' C B 282 44.419 124.259 6.501 1.00 58.95 O
TER
ATOM 2 P G A 346 58.089 124.976 13.261 1.00 56.43 P
ATOM 3 OP1 G A 346 58.520 123.877 14.159 1.00 57.57 O
ATOM 4 OP2 G A 346 57.863 126.331 13.814 1.00 56.04 O
ATOM 5 O5' G A 346 59.156 125.070 12.084 1.00 58.39 O
ATOM 6 C5' G A 346 58.837 125.775 10.874 1.00 61.44 C
ATOM 7 C4' G A 346 58.352 124.810 9.815 1.00 63.41 C
ATOM 8 O4' G A 346 57.560 125.535 8.838 1.00 63.74 O
ATOM 9 C3' G A 346 59.418 124.068 9.015 1.00 64.04 C
ATOM 10 O3' G A 346 58.835 122.812 8.624 1.00 65.35 O
ATOM 11 C2' G A 346 59.611 125.015 7.832 1.00 63.83 C
ATOM 12 O2' G A 346 60.212 124.438 6.693 1.00 65.19 O
ATOM 13 C1' G A 346 58.162 125.425 7.567 1.00 62.81 C
ATOM 14 N9 G A 346 57.931 126.681 6.863 1.00 61.05 N
ATOM 15 C8 G A 346 58.789 127.741 6.708 1.00 61.54 C
ATOM 16 N7 G A 346 58.256 128.737 6.053 1.00 62.12 N
ATOM 17 C5 G A 346 56.973 128.302 5.754 1.00 60.74 C
ATOM 18 C6 G A 346 55.921 128.950 5.065 1.00 62.16 C
ATOM 19 O6 G A 346 55.906 130.084 4.570 1.00 63.94 O
ATOM 20 N1 G A 346 54.792 128.141 4.982 1.00 62.35 N
ATOM 21 C2 G A 346 54.688 126.875 5.500 1.00 61.10 C
ATOM 22 N2 G A 346 53.518 126.253 5.315 1.00 61.84 N
ATOM 23 N3 G A 346 55.658 126.264 6.150 1.00 60.19 N
ATOM 24 C4 G A 346 56.764 127.031 6.239 1.00 60.27 C
ATOM 25 P U A 347 59.692 121.731 7.792 1.00 65.55 P
ATOM 26 OP1 U A 347 61.051 121.607 8.380 1.00 65.48 O
ATOM 27 OP2 U A 347 59.542 122.062 6.354 1.00 66.41 O
ATOM 28 O5' U A 347 58.900 120.365 8.012 1.00 65.07 O
TER
ATOM 1 O3' G B 280 50.998 127.015 2.239 1.00 60.84 O
ATOM 2 P A B 281 50.787 127.829 3.609 1.00 62.60 P
ATOM 3 OP1 A B 281 49.484 128.542 3.488 1.00 61.96 O
ATOM 4 OP2 A B 281 52.021 128.606 3.901 1.00 60.97 O
ATOM 5 O5' A B 281 50.664 126.673 4.703 1.00 61.26 O
ATOM 6 C5' A B 281 49.431 126.433 5.417 1.00 59.91 C
ATOM 7 C4' A B 281 48.516 125.547 4.603 1.00 59.50 C
ATOM 8 O4' A B 281 49.275 124.442 4.042 1.00 60.69 O
ATOM 9 C3' A B 281 47.395 124.868 5.374 1.00 58.81 C
ATOM 10 O3' A B 281 46.278 125.716 5.598 1.00 58.99 O
ATOM 11 C2' A B 281 47.072 123.679 4.481 1.00 58.91 C
ATOM 12 O2' A B 281 46.298 124.024 3.350 1.00 57.09 O
ATOM 13 C1' A B 281 48.474 123.268 4.029 1.00 59.47 C
ATOM 14 N9 A B 281 49.080 122.300 4.941 1.00 60.05 N
ATOM 15 C8 A B 281 50.252 122.430 5.648 1.00 60.24 C
ATOM 16 N7 A B 281 50.535 121.394 6.397 1.00 60.65 N
ATOM 17 C5 A B 281 49.482 120.519 6.168 1.00 60.33 C
ATOM 18 C6 A B 281 49.195 119.233 6.664 1.00 60.06 C
ATOM 19 N6 A B 281 49.978 118.581 7.530 1.00 58.32 N
ATOM 20 N1 A B 281 48.064 118.633 6.231 1.00 59.81 N
ATOM 21 C2 A B 281 47.283 119.287 5.361 1.00 59.67 C
ATOM 22 N3 A B 281 47.445 120.494 4.825 1.00 59.83 N
ATOM 23 C4 A B 281 48.578 121.064 5.274 1.00 60.16 C
ATOM 24 P C B 282 45.356 125.487 6.897 1.00 60.78 P
ATOM 25 OP1 C B 282 44.504 126.696 7.054 1.00 59.42 O
ATOM 26 OP2 C B 282 46.231 125.055 8.022 1.00 60.51 O
ATOM 27 O5' C B 282 44.419 124.259 6.501 1.00 58.95 O
TER
Atoms:
OP1: (58.520,123.877,14.159)
OP2: (57.863,126.331,13.814)
C3': (59.418,124.068,9.015)
C1': (58.162,125.425,7.567)
C5': (58.837,125.775,10.874)
O6: (55.906,130.084,4.570)
O4': (57.560,125.535,8.838)
C8: (58.789,127.741,6.708)
C2: (54.688,126.875,5.500)
C6: (55.921,128.950,5.065)
C5: (56.973,128.302,5.754)
C4: (56.764,127.031,6.239)
P: (58.089,124.976,13.261)
C4': (58.352,124.810,9.815)
C2': (59.611,125.015,7.832)
O2': (60.212,124.438,6.693)
N1: (54.792,128.141,4.982)
N2: (53.518,126.253,5.315)
N3: (55.658,126.264,6.150)
N7: (58.256,128.737,6.053)
N9: (57.931,126.681,6.863)
O5': (59.156,125.070,12.084)
O3': (58.835,122.812,8.624)
OP2: (57.863,126.331,13.814)
C3': (59.418,124.068,9.015)
C1': (58.162,125.425,7.567)
C5': (58.837,125.775,10.874)
O6: (55.906,130.084,4.570)
O4': (57.560,125.535,8.838)
C8: (58.789,127.741,6.708)
C2: (54.688,126.875,5.500)
C6: (55.921,128.950,5.065)
C5: (56.973,128.302,5.754)
C4: (56.764,127.031,6.239)
P: (58.089,124.976,13.261)
C4': (58.352,124.810,9.815)
C2': (59.611,125.015,7.832)
O2': (60.212,124.438,6.693)
N1: (54.792,128.141,4.982)
N2: (53.518,126.253,5.315)
N3: (55.658,126.264,6.150)
N7: (58.256,128.737,6.053)
N9: (57.931,126.681,6.863)
O5': (59.156,125.070,12.084)
O3': (58.835,122.812,8.624)
OP1: (49.484,128.542,3.488)
OP2: (52.021,128.606,3.901)
C3': (47.395,124.868,5.374)
C1': (48.474,123.268,4.029)
C5': (49.431,126.433,5.417)
O4': (49.275,124.442,4.042)
C8: (50.252,122.430,5.648)
O2': (46.298,124.024,3.350)
C6: (49.195,119.233,6.664)
C5: (49.482,120.519,6.168)
C4: (48.578,121.064,5.274)
P: (50.787,127.829,3.609)
C4': (48.516,125.547,4.603)
C2': (47.072,123.679,4.481)
C2: (47.283,119.287,5.361)
N1: (48.064,118.633,6.231)
N3: (47.445,120.494,4.825)
N6: (49.978,118.581,7.530)
N7: (50.535,121.394,6.397)
N9: (49.080,122.300,4.941)
O5': (50.664,126.673,4.703)
O3': (46.278,125.716,5.598)
OP2: (52.021,128.606,3.901)
C3': (47.395,124.868,5.374)
C1': (48.474,123.268,4.029)
C5': (49.431,126.433,5.417)
O4': (49.275,124.442,4.042)
C8: (50.252,122.430,5.648)
O2': (46.298,124.024,3.350)
C6: (49.195,119.233,6.664)
C5: (49.482,120.519,6.168)
C4: (48.578,121.064,5.274)
P: (50.787,127.829,3.609)
C4': (48.516,125.547,4.603)
C2': (47.072,123.679,4.481)
C2: (47.283,119.287,5.361)
N1: (48.064,118.633,6.231)
N3: (47.445,120.494,4.825)
N6: (49.978,118.581,7.530)
N7: (50.535,121.394,6.397)
N9: (49.080,122.300,4.941)
O5': (50.664,126.673,4.703)
O3': (46.278,125.716,5.598)
Image (generated by PyMOL):