Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A513:A516
Extra
PDB:
ATOM 1 O3' U A 512 35.746-113.110 -36.780 1.00 58.38 O
ATOM 2 P G A 513 36.774-114.194 -37.376 1.00 28.07 P
ATOM 3 OP1 G A 513 36.377-114.439 -38.780 1.00 65.62 O
ATOM 4 OP2 G A 513 36.794-115.328 -36.437 1.00 60.31 O
ATOM 5 O5' G A 513 38.155-113.426 -37.333 1.00 45.66 O
ATOM 6 C5' G A 513 38.448-112.387 -38.254 1.00 39.41 C
ATOM 7 C4' G A 513 39.761-111.711 -37.935 1.00 39.84 C
ATOM 8 O4' G A 513 39.705-111.097 -36.619 1.00 48.79 O
ATOM 9 C3' G A 513 40.983-112.612 -37.836 1.00 38.79 C
ATOM 10 O3' G A 513 41.492-113.014 -39.096 1.00 42.66 O
ATOM 11 C2' G A 513 41.949-111.741 -37.054 1.00 39.76 C
ATOM 12 O2' G A 513 42.500-110.747 -37.896 1.00 44.36 O
ATOM 13 C1' G A 513 41.012-111.064 -36.056 1.00 42.97 C
ATOM 14 N9 G A 513 41.027-111.772 -34.758 1.00 38.61 N
ATOM 15 C8 G A 513 40.185-112.727 -34.288 1.00 41.25 C
ATOM 16 N7 G A 513 40.536-113.192 -33.116 1.00 43.68 N
ATOM 17 C5 G A 513 41.686-112.528 -32.787 1.00 37.37 C
ATOM 18 C6 G A 513 42.512-112.625 -31.646 1.00 42.19 C
ATOM 19 O6 G A 513 42.426-113.328 -30.637 1.00 50.68 O
ATOM 20 N1 G A 513 43.569-111.751 -31.732 1.00 48.09 N
ATOM 21 C2 G A 513 43.827-110.905 -32.768 1.00 43.55 C
ATOM 22 N2 G A 513 44.927-110.143 -32.638 1.00 39.43 N
ATOM 23 N3 G A 513 43.060-110.822 -33.838 1.00 43.19 N
ATOM 24 C4 G A 513 42.005-111.652 -33.790 1.00 38.78 C
ATOM 25 P A A 514 41.814-114.564 -39.382 1.00 41.47 P
ATOM 26 OP1 A A 514 42.141-114.702 -40.801 1.00 47.56 O
ATOM 27 OP2 A A 514 40.689-115.333 -38.838 1.00 52.78 O
ATOM 28 O5' A A 514 43.107-114.847 -38.528 1.00 37.96 O
TER
ATOM 1 O3' A B 515 47.716-112.176 -31.288 1.00 33.03 O
ATOM 2 P A B 516 46.669-112.103 -30.066 1.00 39.77 P
ATOM 3 OP1 A B 516 47.442-112.331 -28.817 1.00 38.00 O
ATOM 4 OP2 A B 516 45.556-113.025 -30.376 1.00 49.04 O
ATOM 5 O5' A B 516 46.155-110.599 -30.118 1.00 35.63 O
ATOM 6 C5' A B 516 47.045-109.527 -29.894 1.00 42.96 C
ATOM 7 C4' A B 516 46.347-108.310 -29.348 1.00 37.83 C
ATOM 8 O4' A B 516 45.483-107.747 -30.372 1.00 47.78 O
ATOM 9 C3' A B 516 45.477-108.539 -28.116 1.00 41.97 C
ATOM 10 O3' A B 516 45.711-107.506 -27.149 1.00 50.01 O
ATOM 11 C2' A B 516 44.057-108.424 -28.670 1.00 58.51 C
ATOM 12 O2' A B 516 43.077-107.992 -27.742 1.00 60.41 O
ATOM 13 C1' A B 516 44.243-107.431 -29.808 1.00 45.72 C
ATOM 14 N9 A B 516 43.208-107.533 -30.836 1.00 38.63 N
ATOM 15 C8 A B 516 42.446-108.635 -31.093 1.00 41.19 C
ATOM 16 N7 A B 516 41.533-108.433 -32.002 1.00 44.45 N
ATOM 17 C5 A B 516 41.689-107.098 -32.350 1.00 38.67 C
ATOM 18 C6 A B 516 41.008-106.282 -33.273 1.00 38.44 C
ATOM 19 N6 A B 516 39.987-106.679 -34.059 1.00 36.17 N
ATOM 20 N1 A B 516 41.430-105.015 -33.358 1.00 36.74 N
ATOM 21 C2 A B 516 42.442-104.643 -32.573 1.00 40.66 C
ATOM 22 N3 A B 516 43.154-105.312 -31.679 1.00 38.15 N
ATOM 23 C4 A B 516 42.712-106.546 -31.620 1.00 33.91 C
ATOM 24 P U B 517 46.613-107.818 -25.843 1.00 46.15 P
ATOM 25 OP1 U B 517 46.735-109.297 -25.730 1.00 72.49 O
ATOM 26 OP2 U B 517 46.034-107.062 -24.722 1.00 78.97 O
ATOM 27 O5' U B 517 48.023-107.201 -26.240 1.00102.14 O
TER
ATOM 2 P G A 513 36.774-114.194 -37.376 1.00 28.07 P
ATOM 3 OP1 G A 513 36.377-114.439 -38.780 1.00 65.62 O
ATOM 4 OP2 G A 513 36.794-115.328 -36.437 1.00 60.31 O
ATOM 5 O5' G A 513 38.155-113.426 -37.333 1.00 45.66 O
ATOM 6 C5' G A 513 38.448-112.387 -38.254 1.00 39.41 C
ATOM 7 C4' G A 513 39.761-111.711 -37.935 1.00 39.84 C
ATOM 8 O4' G A 513 39.705-111.097 -36.619 1.00 48.79 O
ATOM 9 C3' G A 513 40.983-112.612 -37.836 1.00 38.79 C
ATOM 10 O3' G A 513 41.492-113.014 -39.096 1.00 42.66 O
ATOM 11 C2' G A 513 41.949-111.741 -37.054 1.00 39.76 C
ATOM 12 O2' G A 513 42.500-110.747 -37.896 1.00 44.36 O
ATOM 13 C1' G A 513 41.012-111.064 -36.056 1.00 42.97 C
ATOM 14 N9 G A 513 41.027-111.772 -34.758 1.00 38.61 N
ATOM 15 C8 G A 513 40.185-112.727 -34.288 1.00 41.25 C
ATOM 16 N7 G A 513 40.536-113.192 -33.116 1.00 43.68 N
ATOM 17 C5 G A 513 41.686-112.528 -32.787 1.00 37.37 C
ATOM 18 C6 G A 513 42.512-112.625 -31.646 1.00 42.19 C
ATOM 19 O6 G A 513 42.426-113.328 -30.637 1.00 50.68 O
ATOM 20 N1 G A 513 43.569-111.751 -31.732 1.00 48.09 N
ATOM 21 C2 G A 513 43.827-110.905 -32.768 1.00 43.55 C
ATOM 22 N2 G A 513 44.927-110.143 -32.638 1.00 39.43 N
ATOM 23 N3 G A 513 43.060-110.822 -33.838 1.00 43.19 N
ATOM 24 C4 G A 513 42.005-111.652 -33.790 1.00 38.78 C
ATOM 25 P A A 514 41.814-114.564 -39.382 1.00 41.47 P
ATOM 26 OP1 A A 514 42.141-114.702 -40.801 1.00 47.56 O
ATOM 27 OP2 A A 514 40.689-115.333 -38.838 1.00 52.78 O
ATOM 28 O5' A A 514 43.107-114.847 -38.528 1.00 37.96 O
TER
ATOM 1 O3' A B 515 47.716-112.176 -31.288 1.00 33.03 O
ATOM 2 P A B 516 46.669-112.103 -30.066 1.00 39.77 P
ATOM 3 OP1 A B 516 47.442-112.331 -28.817 1.00 38.00 O
ATOM 4 OP2 A B 516 45.556-113.025 -30.376 1.00 49.04 O
ATOM 5 O5' A B 516 46.155-110.599 -30.118 1.00 35.63 O
ATOM 6 C5' A B 516 47.045-109.527 -29.894 1.00 42.96 C
ATOM 7 C4' A B 516 46.347-108.310 -29.348 1.00 37.83 C
ATOM 8 O4' A B 516 45.483-107.747 -30.372 1.00 47.78 O
ATOM 9 C3' A B 516 45.477-108.539 -28.116 1.00 41.97 C
ATOM 10 O3' A B 516 45.711-107.506 -27.149 1.00 50.01 O
ATOM 11 C2' A B 516 44.057-108.424 -28.670 1.00 58.51 C
ATOM 12 O2' A B 516 43.077-107.992 -27.742 1.00 60.41 O
ATOM 13 C1' A B 516 44.243-107.431 -29.808 1.00 45.72 C
ATOM 14 N9 A B 516 43.208-107.533 -30.836 1.00 38.63 N
ATOM 15 C8 A B 516 42.446-108.635 -31.093 1.00 41.19 C
ATOM 16 N7 A B 516 41.533-108.433 -32.002 1.00 44.45 N
ATOM 17 C5 A B 516 41.689-107.098 -32.350 1.00 38.67 C
ATOM 18 C6 A B 516 41.008-106.282 -33.273 1.00 38.44 C
ATOM 19 N6 A B 516 39.987-106.679 -34.059 1.00 36.17 N
ATOM 20 N1 A B 516 41.430-105.015 -33.358 1.00 36.74 N
ATOM 21 C2 A B 516 42.442-104.643 -32.573 1.00 40.66 C
ATOM 22 N3 A B 516 43.154-105.312 -31.679 1.00 38.15 N
ATOM 23 C4 A B 516 42.712-106.546 -31.620 1.00 33.91 C
ATOM 24 P U B 517 46.613-107.818 -25.843 1.00 46.15 P
ATOM 25 OP1 U B 517 46.735-109.297 -25.730 1.00 72.49 O
ATOM 26 OP2 U B 517 46.034-107.062 -24.722 1.00 78.97 O
ATOM 27 O5' U B 517 48.023-107.201 -26.240 1.00102.14 O
TER
Atoms:
OP1: (36.377,-114.439,-38.780)
OP2: (36.794,-115.328,-36.437)
C3': (40.983,-112.612,-37.836)
C1': (41.012,-111.064,-36.056)
C5': (38.448,-112.387,-38.254)
O6: (42.426,-113.328,-30.637)
O4': (39.705,-111.097,-36.619)
C8: (40.185,-112.727,-34.288)
C2: (43.827,-110.905,-32.768)
C6: (42.512,-112.625,-31.646)
C5: (41.686,-112.528,-32.787)
C4: (42.005,-111.652,-33.790)
P: (36.774,-114.194,-37.376)
C4': (39.761,-111.711,-37.935)
C2': (41.949,-111.741,-37.054)
O2': (42.500,-110.747,-37.896)
N1: (43.569,-111.751,-31.732)
N2: (44.927,-110.143,-32.638)
N3: (43.060,-110.822,-33.838)
N7: (40.536,-113.192,-33.116)
N9: (41.027,-111.772,-34.758)
O5': (38.155,-113.426,-37.333)
O3': (41.492,-113.014,-39.096)
OP2: (36.794,-115.328,-36.437)
C3': (40.983,-112.612,-37.836)
C1': (41.012,-111.064,-36.056)
C5': (38.448,-112.387,-38.254)
O6: (42.426,-113.328,-30.637)
O4': (39.705,-111.097,-36.619)
C8: (40.185,-112.727,-34.288)
C2: (43.827,-110.905,-32.768)
C6: (42.512,-112.625,-31.646)
C5: (41.686,-112.528,-32.787)
C4: (42.005,-111.652,-33.790)
P: (36.774,-114.194,-37.376)
C4': (39.761,-111.711,-37.935)
C2': (41.949,-111.741,-37.054)
O2': (42.500,-110.747,-37.896)
N1: (43.569,-111.751,-31.732)
N2: (44.927,-110.143,-32.638)
N3: (43.060,-110.822,-33.838)
N7: (40.536,-113.192,-33.116)
N9: (41.027,-111.772,-34.758)
O5': (38.155,-113.426,-37.333)
O3': (41.492,-113.014,-39.096)
OP1: (47.442,-112.331,-28.817)
OP2: (45.556,-113.025,-30.376)
C3': (45.477,-108.539,-28.116)
C1': (44.243,-107.431,-29.808)
C5': (47.045,-109.527,-29.894)
O4': (45.483,-107.747,-30.372)
C8: (42.446,-108.635,-31.093)
O2': (43.077,-107.992,-27.742)
C6: (41.008,-106.282,-33.273)
C5: (41.689,-107.098,-32.350)
C4: (42.712,-106.546,-31.620)
P: (46.669,-112.103,-30.066)
C4': (46.347,-108.310,-29.348)
C2': (44.057,-108.424,-28.670)
C2: (42.442,-104.643,-32.573)
N1: (41.430,-105.015,-33.358)
N3: (43.154,-105.312,-31.679)
N6: (39.987,-106.679,-34.059)
N7: (41.533,-108.433,-32.002)
N9: (43.208,-107.533,-30.836)
O5': (46.155,-110.599,-30.118)
O3': (45.711,-107.506,-27.149)
OP2: (45.556,-113.025,-30.376)
C3': (45.477,-108.539,-28.116)
C1': (44.243,-107.431,-29.808)
C5': (47.045,-109.527,-29.894)
O4': (45.483,-107.747,-30.372)
C8: (42.446,-108.635,-31.093)
O2': (43.077,-107.992,-27.742)
C6: (41.008,-106.282,-33.273)
C5: (41.689,-107.098,-32.350)
C4: (42.712,-106.546,-31.620)
P: (46.669,-112.103,-30.066)
C4': (46.347,-108.310,-29.348)
C2': (44.057,-108.424,-28.670)
C2: (42.442,-104.643,-32.573)
N1: (41.430,-105.015,-33.358)
N3: (43.154,-105.312,-31.679)
N6: (39.987,-106.679,-34.059)
N7: (41.533,-108.433,-32.002)
N9: (43.208,-107.533,-30.836)
O5': (46.155,-110.599,-30.118)
O3': (45.711,-107.506,-27.149)
Image (generated by PyMOL):