Doublet info:
Details
Nucleotide types:
CC
Description:
HH_tran: HH_tran
Program used:
JS
Has errors:
False
Source
PDB id:
SPEC:A4:B4
Extra
PDB:
ATOM 1 O3' U A1047 183.920 132.843 -2.048 1.00 65.93 O
ATOM 2 P C A1048 182.335 132.740 -1.867 1.00 66.01 P
ATOM 3 OP1 C A1048 181.965 131.417 -1.317 1.00 54.40 O
ATOM 4 OP2 C A1048 181.661 132.964 -3.166 1.00 54.40 O
ATOM 5 O5' C A1048 182.034 133.934 -0.844 1.00 66.01 O
ATOM 6 C5' C A1048 182.183 133.790 0.588 1.00 66.01 C
ATOM 7 C4' C A1048 181.987 135.146 1.276 1.00 66.01 C
ATOM 8 O4' C A1048 182.973 136.093 0.816 1.00 66.01 O
ATOM 9 C3' C A1048 180.613 135.735 0.957 1.00 66.01 C
ATOM 10 O3' C A1048 179.634 135.262 1.918 1.00 66.01 O
ATOM 11 C2' C A1048 180.889 137.229 1.124 1.00 66.01 C
ATOM 12 O2' C A1048 180.769 137.648 2.480 1.00 66.01 O
ATOM 13 C1' C A1048 182.344 137.391 0.667 1.00 66.01 C
ATOM 14 N1 C A1048 182.509 137.937 -0.714 1.00 54.40 N
ATOM 15 C2 C A1048 182.166 139.288 -0.946 1.00 54.40 C
ATOM 16 O2 C A1048 181.662 139.986 -0.066 1.00 54.40 O
ATOM 17 N3 C A1048 182.423 139.811 -2.188 1.00 54.40 N
ATOM 18 C4 C A1048 182.934 139.098 -3.149 1.00 54.40 C
ATOM 19 N4 C A1048 183.172 139.718 -4.338 1.00 54.40 N
ATOM 20 C5 C A1048 183.249 137.696 -2.988 1.00 54.40 C
ATOM 21 C6 C A1048 183.006 137.176 -1.767 1.00 54.40 C
ATOM 22 H5'1 C A1048 183.180 133.436 0.782 1.00 0.00 H
ATOM 23 H5'2 C A1048 181.434 133.096 0.930 1.00 0.00 H
ATOM 24 H4' C A1048 182.113 135.049 2.341 1.00 0.00 H
ATOM 25 H3' C A1048 180.294 135.520 -0.048 1.00 0.00 H
ATOM 26 H1' C A1048 182.833 138.106 1.298 1.00 0.00 H
ATOM 27 H2' C A1048 180.200 137.825 0.556 1.00 0.00 H
ATOM 28 HO'2 C A1048 179.874 137.476 2.781 1.00 0.00 H
ATOM 29 H6 C A1048 183.204 136.139 -1.584 1.00 0.00 H
ATOM 30 H41 C A1048 183.564 139.205 -5.096 1.00 0.00 H
ATOM 31 H42 C A1048 182.954 140.683 -4.445 1.00 0.00 H
ATOM 32 H5 C A1048 183.653 137.068 -3.755 1.00 0.00 H
ATOM 33 P G A1049 178.054 135.274 1.643 1.00 75.32 P
ATOM 34 OP1 G A1049 177.341 134.576 2.736 1.00 57.66 O
ATOM 35 OP2 G A1049 177.734 134.652 0.339 1.00 57.66 O
ATOM 36 O5' G A1049 177.693 136.833 1.603 1.00 75.32 O
TER
ATOM 68 O3' U B1503 184.859 143.339 -9.972 1.00 54.42 O
ATOM 69 P C B1504 183.832 142.791 -11.066 1.00 57.44 P
ATOM 70 OP1 C B1504 183.736 143.738 -12.200 1.00 56.47 O
ATOM 71 OP2 C B1504 182.498 142.584 -10.460 1.00 56.36 O
ATOM 72 O5' C B1504 184.497 141.396 -11.487 1.00 56.64 O
ATOM 73 C5' C B1504 185.523 141.308 -12.502 1.00 56.85 C
ATOM 74 C4' C B1504 186.058 139.875 -12.587 1.00 57.01 C
ATOM 75 O4' C B1504 186.612 139.468 -11.320 1.00 57.03 O
ATOM 76 C3' C B1504 184.941 138.878 -12.883 1.00 57.12 C
ATOM 77 O3' C B1504 184.656 138.810 -14.303 1.00 57.23 O
ATOM 78 C2' C B1504 185.587 137.584 -12.390 1.00 58.05 C
ATOM 79 O2' C B1504 186.394 136.965 -13.388 1.00 57.67 O
ATOM 80 C1' C B1504 186.456 138.032 -11.210 1.00 57.52 C
ATOM 81 N1 C B1504 185.900 137.627 -9.886 1.00 57.92 N
ATOM 82 C2 C B1504 186.041 136.279 -9.488 1.00 58.39 C
ATOM 83 O2 C B1504 186.506 135.427 -10.246 1.00 58.79 O
ATOM 84 N3 C B1504 185.649 135.943 -8.219 1.00 57.41 N
ATOM 85 C4 C B1504 185.120 136.810 -7.407 1.00 56.59 C
ATOM 86 N4 C B1504 184.799 136.379 -6.157 1.00 55.38 N
ATOM 87 C5 C B1504 184.866 138.182 -7.791 1.00 57.36 C
ATOM 88 C6 C B1504 185.258 138.522 -9.038 1.00 57.93 C
ATOM 89 H5'1 C B1504 186.324 141.969 -12.220 1.00 0.00 H
ATOM 90 H5'2 C B1504 185.081 141.587 -13.443 1.00 0.00 H
ATOM 91 H4' C B1504 186.837 139.805 -13.326 1.00 0.00 H
ATOM 92 H3' C B1504 184.046 139.090 -12.325 1.00 0.00 H
ATOM 93 H1' C B1504 187.416 137.559 -11.275 1.00 0.00 H
ATOM 94 H2' C B1504 184.852 136.862 -12.103 1.00 0.00 H
ATOM 95 HO'2 C B1504 185.851 136.776 -14.157 1.00 0.00 H
ATOM 96 H6 C B1504 185.081 139.514 -9.409 1.00 0.00 H
ATOM 97 H41 C B1504 184.389 137.008 -5.505 1.00 0.00 H
ATOM 98 H42 C B1504 184.974 135.433 -5.900 1.00 0.00 H
ATOM 99 H5 C B1504 184.404 138.917 -7.162 1.00 0.00 H
ATOM 100 P G B1505 183.228 138.351 -14.872 1.00 60.17 P
ATOM 101 OP1 G B1505 183.243 138.362 -16.352 1.00 58.89 O
ATOM 102 OP2 G B1505 182.156 139.235 -14.364 1.00 57.93 O
ATOM 103 O5' G B1505 183.040 136.873 -14.283 1.00 57.67 O
TER
ATOM 2 P C A1048 182.335 132.740 -1.867 1.00 66.01 P
ATOM 3 OP1 C A1048 181.965 131.417 -1.317 1.00 54.40 O
ATOM 4 OP2 C A1048 181.661 132.964 -3.166 1.00 54.40 O
ATOM 5 O5' C A1048 182.034 133.934 -0.844 1.00 66.01 O
ATOM 6 C5' C A1048 182.183 133.790 0.588 1.00 66.01 C
ATOM 7 C4' C A1048 181.987 135.146 1.276 1.00 66.01 C
ATOM 8 O4' C A1048 182.973 136.093 0.816 1.00 66.01 O
ATOM 9 C3' C A1048 180.613 135.735 0.957 1.00 66.01 C
ATOM 10 O3' C A1048 179.634 135.262 1.918 1.00 66.01 O
ATOM 11 C2' C A1048 180.889 137.229 1.124 1.00 66.01 C
ATOM 12 O2' C A1048 180.769 137.648 2.480 1.00 66.01 O
ATOM 13 C1' C A1048 182.344 137.391 0.667 1.00 66.01 C
ATOM 14 N1 C A1048 182.509 137.937 -0.714 1.00 54.40 N
ATOM 15 C2 C A1048 182.166 139.288 -0.946 1.00 54.40 C
ATOM 16 O2 C A1048 181.662 139.986 -0.066 1.00 54.40 O
ATOM 17 N3 C A1048 182.423 139.811 -2.188 1.00 54.40 N
ATOM 18 C4 C A1048 182.934 139.098 -3.149 1.00 54.40 C
ATOM 19 N4 C A1048 183.172 139.718 -4.338 1.00 54.40 N
ATOM 20 C5 C A1048 183.249 137.696 -2.988 1.00 54.40 C
ATOM 21 C6 C A1048 183.006 137.176 -1.767 1.00 54.40 C
ATOM 22 H5'1 C A1048 183.180 133.436 0.782 1.00 0.00 H
ATOM 23 H5'2 C A1048 181.434 133.096 0.930 1.00 0.00 H
ATOM 24 H4' C A1048 182.113 135.049 2.341 1.00 0.00 H
ATOM 25 H3' C A1048 180.294 135.520 -0.048 1.00 0.00 H
ATOM 26 H1' C A1048 182.833 138.106 1.298 1.00 0.00 H
ATOM 27 H2' C A1048 180.200 137.825 0.556 1.00 0.00 H
ATOM 28 HO'2 C A1048 179.874 137.476 2.781 1.00 0.00 H
ATOM 29 H6 C A1048 183.204 136.139 -1.584 1.00 0.00 H
ATOM 30 H41 C A1048 183.564 139.205 -5.096 1.00 0.00 H
ATOM 31 H42 C A1048 182.954 140.683 -4.445 1.00 0.00 H
ATOM 32 H5 C A1048 183.653 137.068 -3.755 1.00 0.00 H
ATOM 33 P G A1049 178.054 135.274 1.643 1.00 75.32 P
ATOM 34 OP1 G A1049 177.341 134.576 2.736 1.00 57.66 O
ATOM 35 OP2 G A1049 177.734 134.652 0.339 1.00 57.66 O
ATOM 36 O5' G A1049 177.693 136.833 1.603 1.00 75.32 O
TER
ATOM 68 O3' U B1503 184.859 143.339 -9.972 1.00 54.42 O
ATOM 69 P C B1504 183.832 142.791 -11.066 1.00 57.44 P
ATOM 70 OP1 C B1504 183.736 143.738 -12.200 1.00 56.47 O
ATOM 71 OP2 C B1504 182.498 142.584 -10.460 1.00 56.36 O
ATOM 72 O5' C B1504 184.497 141.396 -11.487 1.00 56.64 O
ATOM 73 C5' C B1504 185.523 141.308 -12.502 1.00 56.85 C
ATOM 74 C4' C B1504 186.058 139.875 -12.587 1.00 57.01 C
ATOM 75 O4' C B1504 186.612 139.468 -11.320 1.00 57.03 O
ATOM 76 C3' C B1504 184.941 138.878 -12.883 1.00 57.12 C
ATOM 77 O3' C B1504 184.656 138.810 -14.303 1.00 57.23 O
ATOM 78 C2' C B1504 185.587 137.584 -12.390 1.00 58.05 C
ATOM 79 O2' C B1504 186.394 136.965 -13.388 1.00 57.67 O
ATOM 80 C1' C B1504 186.456 138.032 -11.210 1.00 57.52 C
ATOM 81 N1 C B1504 185.900 137.627 -9.886 1.00 57.92 N
ATOM 82 C2 C B1504 186.041 136.279 -9.488 1.00 58.39 C
ATOM 83 O2 C B1504 186.506 135.427 -10.246 1.00 58.79 O
ATOM 84 N3 C B1504 185.649 135.943 -8.219 1.00 57.41 N
ATOM 85 C4 C B1504 185.120 136.810 -7.407 1.00 56.59 C
ATOM 86 N4 C B1504 184.799 136.379 -6.157 1.00 55.38 N
ATOM 87 C5 C B1504 184.866 138.182 -7.791 1.00 57.36 C
ATOM 88 C6 C B1504 185.258 138.522 -9.038 1.00 57.93 C
ATOM 89 H5'1 C B1504 186.324 141.969 -12.220 1.00 0.00 H
ATOM 90 H5'2 C B1504 185.081 141.587 -13.443 1.00 0.00 H
ATOM 91 H4' C B1504 186.837 139.805 -13.326 1.00 0.00 H
ATOM 92 H3' C B1504 184.046 139.090 -12.325 1.00 0.00 H
ATOM 93 H1' C B1504 187.416 137.559 -11.275 1.00 0.00 H
ATOM 94 H2' C B1504 184.852 136.862 -12.103 1.00 0.00 H
ATOM 95 HO'2 C B1504 185.851 136.776 -14.157 1.00 0.00 H
ATOM 96 H6 C B1504 185.081 139.514 -9.409 1.00 0.00 H
ATOM 97 H41 C B1504 184.389 137.008 -5.505 1.00 0.00 H
ATOM 98 H42 C B1504 184.974 135.433 -5.900 1.00 0.00 H
ATOM 99 H5 C B1504 184.404 138.917 -7.162 1.00 0.00 H
ATOM 100 P G B1505 183.228 138.351 -14.872 1.00 60.17 P
ATOM 101 OP1 G B1505 183.243 138.362 -16.352 1.00 58.89 O
ATOM 102 OP2 G B1505 182.156 139.235 -14.364 1.00 57.93 O
ATOM 103 O5' G B1505 183.040 136.873 -14.283 1.00 57.67 O
TER
Atoms:
OP1: (181.965,131.417,-1.317)
OP2: (181.661,132.964,-3.166)
O5': (182.034,133.934,-0.844)
C3': (180.613,135.735,0.957)
C1': (182.344,137.391,0.667)
C5': (182.183,133.790,0.588)
H2': (180.200,137.825,0.556)
O2: (181.662,139.986,-0.066)
H3': (180.294,135.520,-0.048)
O4': (182.973,136.093,0.816)
C2: (182.166,139.288,-0.946)
C6: (183.006,137.176,-1.767)
C5: (183.249,137.696,-2.988)
C4: (182.934,139.098,-3.149)
HO'2: (179.874,137.476,2.781)
P: (182.335,132.740,-1.867)
C4': (181.987,135.146,1.276)
H5'1: (183.180,133.436,0.782)
H5'2: (181.434,133.096,0.930)
O2': (180.769,137.648,2.480)
N1: (182.509,137.937,-0.714)
N3: (182.423,139.811,-2.188)
N4: (183.172,139.718,-4.338)
H1': (182.833,138.106,1.298)
H4': (182.113,135.049,2.341)
H6: (183.204,136.139,-1.584)
H5: (183.653,137.068,-3.755)
H42: (182.954,140.683,-4.445)
H41: (183.564,139.205,-5.096)
O3': (179.634,135.262,1.918)
C2': (180.889,137.229,1.124)
OP2: (181.661,132.964,-3.166)
O5': (182.034,133.934,-0.844)
C3': (180.613,135.735,0.957)
C1': (182.344,137.391,0.667)
C5': (182.183,133.790,0.588)
H2': (180.200,137.825,0.556)
O2: (181.662,139.986,-0.066)
H3': (180.294,135.520,-0.048)
O4': (182.973,136.093,0.816)
C2: (182.166,139.288,-0.946)
C6: (183.006,137.176,-1.767)
C5: (183.249,137.696,-2.988)
C4: (182.934,139.098,-3.149)
HO'2: (179.874,137.476,2.781)
P: (182.335,132.740,-1.867)
C4': (181.987,135.146,1.276)
H5'1: (183.180,133.436,0.782)
H5'2: (181.434,133.096,0.930)
O2': (180.769,137.648,2.480)
N1: (182.509,137.937,-0.714)
N3: (182.423,139.811,-2.188)
N4: (183.172,139.718,-4.338)
H1': (182.833,138.106,1.298)
H4': (182.113,135.049,2.341)
H6: (183.204,136.139,-1.584)
H5: (183.653,137.068,-3.755)
H42: (182.954,140.683,-4.445)
H41: (183.564,139.205,-5.096)
O3': (179.634,135.262,1.918)
C2': (180.889,137.229,1.124)
OP1: (183.736,143.738,-12.200)
OP2: (182.498,142.584,-10.460)
O5': (184.497,141.396,-11.487)
C3': (184.941,138.878,-12.883)
C1': (186.456,138.032,-11.210)
C5': (185.523,141.308,-12.502)
H2': (184.852,136.862,-12.103)
O2: (186.506,135.427,-10.246)
H3': (184.046,139.090,-12.325)
O4': (186.612,139.468,-11.320)
C2: (186.041,136.279,-9.488)
C6: (185.258,138.522,-9.038)
C5: (184.866,138.182,-7.791)
C4: (185.120,136.810,-7.407)
HO'2: (185.851,136.776,-14.157)
P: (183.832,142.791,-11.066)
C4': (186.058,139.875,-12.587)
H5'1: (186.324,141.969,-12.220)
H5'2: (185.081,141.587,-13.443)
O2': (186.394,136.965,-13.388)
N1: (185.900,137.627,-9.886)
N3: (185.649,135.943,-8.219)
N4: (184.799,136.379,-6.157)
H1': (187.416,137.559,-11.275)
H4': (186.837,139.805,-13.326)
H6: (185.081,139.514,-9.409)
H5: (184.404,138.917,-7.162)
H42: (184.974,135.433,-5.900)
H41: (184.389,137.008,-5.505)
O3': (184.656,138.810,-14.303)
C2': (185.587,137.584,-12.390)
OP2: (182.498,142.584,-10.460)
O5': (184.497,141.396,-11.487)
C3': (184.941,138.878,-12.883)
C1': (186.456,138.032,-11.210)
C5': (185.523,141.308,-12.502)
H2': (184.852,136.862,-12.103)
O2: (186.506,135.427,-10.246)
H3': (184.046,139.090,-12.325)
O4': (186.612,139.468,-11.320)
C2: (186.041,136.279,-9.488)
C6: (185.258,138.522,-9.038)
C5: (184.866,138.182,-7.791)
C4: (185.120,136.810,-7.407)
HO'2: (185.851,136.776,-14.157)
P: (183.832,142.791,-11.066)
C4': (186.058,139.875,-12.587)
H5'1: (186.324,141.969,-12.220)
H5'2: (185.081,141.587,-13.443)
O2': (186.394,136.965,-13.388)
N1: (185.900,137.627,-9.886)
N3: (185.649,135.943,-8.219)
N4: (184.799,136.379,-6.157)
H1': (187.416,137.559,-11.275)
H4': (186.837,139.805,-13.326)
H6: (185.081,139.514,-9.409)
H5: (184.404,138.917,-7.162)
H42: (184.974,135.433,-5.900)
H41: (184.389,137.008,-5.505)
O3': (184.656,138.810,-14.303)
C2': (185.587,137.584,-12.390)
Image (generated by PyMOL):