Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:013:0507
Extra
PDB:
ATOM 1 O3' U A 12 34.311 148.324 73.877 1.00 39.61 O
ATOM 2 P G A 13 34.793 147.929 72.397 1.00 39.91 P
ATOM 3 OP1 G A 13 36.177 148.441 72.238 1.00 38.77 O
ATOM 4 OP2 G A 13 33.736 148.361 71.451 1.00 42.48 O
ATOM 5 O5' G A 13 34.833 146.336 72.389 1.00 39.77 O
ATOM 6 C5' G A 13 35.782 145.591 73.181 1.00 37.14 C
ATOM 7 C4' G A 13 35.461 144.117 73.105 1.00 38.30 C
ATOM 8 O4' G A 13 34.176 143.865 73.739 1.00 40.17 O
ATOM 9 C3' G A 13 35.307 143.586 71.688 1.00 37.36 C
ATOM 10 O3' G A 13 36.575 143.201 71.177 1.00 36.47 O
ATOM 11 C2' G A 13 34.362 142.409 71.871 1.00 37.48 C
ATOM 12 O2' G A 13 35.044 141.287 72.374 1.00 39.41 O
ATOM 13 C1' G A 13 33.432 142.931 72.970 1.00 38.89 C
ATOM 14 N9 G A 13 32.230 143.613 72.493 1.00 40.24 N
ATOM 15 C8 G A 13 32.151 144.899 72.018 1.00 38.16 C
ATOM 16 N7 G A 13 30.938 145.256 71.706 1.00 39.14 N
ATOM 17 C5 G A 13 30.167 144.135 71.978 1.00 39.23 C
ATOM 18 C6 G A 13 28.773 143.927 71.837 1.00 39.59 C
ATOM 19 O6 G A 13 27.916 144.720 71.441 1.00 41.54 O
ATOM 20 N1 G A 13 28.404 142.644 72.220 1.00 39.11 N
ATOM 21 C2 G A 13 29.261 141.687 72.688 1.00 39.99 C
ATOM 22 N2 G A 13 28.710 140.512 73.012 1.00 38.68 N
ATOM 23 N3 G A 13 30.567 141.868 72.829 1.00 41.98 N
ATOM 24 C4 G A 13 30.948 143.108 72.456 1.00 40.33 C
ATOM 25 P G A 14 36.910 143.410 69.621 1.00 35.97 P
ATOM 26 OP1 G A 14 38.370 143.260 69.424 1.00 36.65 O
ATOM 27 OP2 G A 14 36.243 144.665 69.200 1.00 37.21 O
ATOM 28 O5' G A 14 36.196 142.184 68.899 1.00 34.91 O
TER
ATOM 1 O3' G B 506 25.104 140.500 69.833 1.00 39.25 O
ATOM 2 P A B 507 24.858 140.538 71.419 1.00 39.55 P
ATOM 3 OP1 A B 507 23.428 140.839 71.678 1.00 39.15 O
ATOM 4 OP2 A B 507 25.902 141.409 72.018 1.00 38.90 O
ATOM 5 O5' A B 507 25.142 139.037 71.864 1.00 39.30 O
ATOM 6 C5' A B 507 24.203 137.984 71.584 1.00 39.14 C
ATOM 7 C4' A B 507 24.814 136.643 71.924 1.00 39.99 C
ATOM 8 O4' A B 507 25.727 136.212 70.884 1.00 38.64 O
ATOM 9 C3' A B 507 25.628 136.651 73.200 1.00 39.81 C
ATOM 10 O3' A B 507 24.810 136.414 74.322 1.00 40.46 O
ATOM 11 C2' A B 507 26.659 135.564 72.957 1.00 40.98 C
ATOM 12 O2' A B 507 26.142 134.272 73.188 1.00 42.78 O
ATOM 13 C1' A B 507 26.934 135.753 71.465 1.00 39.84 C
ATOM 14 N9 A B 507 27.969 136.746 71.171 1.00 39.85 N
ATOM 15 C8 A B 507 27.788 137.969 70.575 1.00 40.44 C
ATOM 16 N7 A B 507 28.895 138.640 70.397 1.00 41.96 N
ATOM 17 C5 A B 507 29.875 137.807 70.914 1.00 40.78 C
ATOM 18 C6 A B 507 31.268 137.938 71.004 1.00 40.60 C
ATOM 19 N6 A B 507 31.942 138.996 70.540 1.00 38.93 N
ATOM 20 N1 A B 507 31.956 136.931 71.582 1.00 40.27 N
ATOM 21 C2 A B 507 31.280 135.868 72.024 1.00 40.28 C
ATOM 22 N3 A B 507 29.972 135.625 71.987 1.00 40.10 N
ATOM 23 C4 A B 507 29.318 136.644 71.409 1.00 39.88 C
ATOM 24 P A B 508 25.128 137.166 75.697 1.00 42.41 P
ATOM 25 OP1 A B 508 23.988 136.885 76.604 1.00 41.14 O
ATOM 26 OP2 A B 508 25.504 138.573 75.405 1.00 39.43 O
ATOM 27 O5' A B 508 26.426 136.414 76.235 1.00 41.36 O
TER
ATOM 2 P G A 13 34.793 147.929 72.397 1.00 39.91 P
ATOM 3 OP1 G A 13 36.177 148.441 72.238 1.00 38.77 O
ATOM 4 OP2 G A 13 33.736 148.361 71.451 1.00 42.48 O
ATOM 5 O5' G A 13 34.833 146.336 72.389 1.00 39.77 O
ATOM 6 C5' G A 13 35.782 145.591 73.181 1.00 37.14 C
ATOM 7 C4' G A 13 35.461 144.117 73.105 1.00 38.30 C
ATOM 8 O4' G A 13 34.176 143.865 73.739 1.00 40.17 O
ATOM 9 C3' G A 13 35.307 143.586 71.688 1.00 37.36 C
ATOM 10 O3' G A 13 36.575 143.201 71.177 1.00 36.47 O
ATOM 11 C2' G A 13 34.362 142.409 71.871 1.00 37.48 C
ATOM 12 O2' G A 13 35.044 141.287 72.374 1.00 39.41 O
ATOM 13 C1' G A 13 33.432 142.931 72.970 1.00 38.89 C
ATOM 14 N9 G A 13 32.230 143.613 72.493 1.00 40.24 N
ATOM 15 C8 G A 13 32.151 144.899 72.018 1.00 38.16 C
ATOM 16 N7 G A 13 30.938 145.256 71.706 1.00 39.14 N
ATOM 17 C5 G A 13 30.167 144.135 71.978 1.00 39.23 C
ATOM 18 C6 G A 13 28.773 143.927 71.837 1.00 39.59 C
ATOM 19 O6 G A 13 27.916 144.720 71.441 1.00 41.54 O
ATOM 20 N1 G A 13 28.404 142.644 72.220 1.00 39.11 N
ATOM 21 C2 G A 13 29.261 141.687 72.688 1.00 39.99 C
ATOM 22 N2 G A 13 28.710 140.512 73.012 1.00 38.68 N
ATOM 23 N3 G A 13 30.567 141.868 72.829 1.00 41.98 N
ATOM 24 C4 G A 13 30.948 143.108 72.456 1.00 40.33 C
ATOM 25 P G A 14 36.910 143.410 69.621 1.00 35.97 P
ATOM 26 OP1 G A 14 38.370 143.260 69.424 1.00 36.65 O
ATOM 27 OP2 G A 14 36.243 144.665 69.200 1.00 37.21 O
ATOM 28 O5' G A 14 36.196 142.184 68.899 1.00 34.91 O
TER
ATOM 1 O3' G B 506 25.104 140.500 69.833 1.00 39.25 O
ATOM 2 P A B 507 24.858 140.538 71.419 1.00 39.55 P
ATOM 3 OP1 A B 507 23.428 140.839 71.678 1.00 39.15 O
ATOM 4 OP2 A B 507 25.902 141.409 72.018 1.00 38.90 O
ATOM 5 O5' A B 507 25.142 139.037 71.864 1.00 39.30 O
ATOM 6 C5' A B 507 24.203 137.984 71.584 1.00 39.14 C
ATOM 7 C4' A B 507 24.814 136.643 71.924 1.00 39.99 C
ATOM 8 O4' A B 507 25.727 136.212 70.884 1.00 38.64 O
ATOM 9 C3' A B 507 25.628 136.651 73.200 1.00 39.81 C
ATOM 10 O3' A B 507 24.810 136.414 74.322 1.00 40.46 O
ATOM 11 C2' A B 507 26.659 135.564 72.957 1.00 40.98 C
ATOM 12 O2' A B 507 26.142 134.272 73.188 1.00 42.78 O
ATOM 13 C1' A B 507 26.934 135.753 71.465 1.00 39.84 C
ATOM 14 N9 A B 507 27.969 136.746 71.171 1.00 39.85 N
ATOM 15 C8 A B 507 27.788 137.969 70.575 1.00 40.44 C
ATOM 16 N7 A B 507 28.895 138.640 70.397 1.00 41.96 N
ATOM 17 C5 A B 507 29.875 137.807 70.914 1.00 40.78 C
ATOM 18 C6 A B 507 31.268 137.938 71.004 1.00 40.60 C
ATOM 19 N6 A B 507 31.942 138.996 70.540 1.00 38.93 N
ATOM 20 N1 A B 507 31.956 136.931 71.582 1.00 40.27 N
ATOM 21 C2 A B 507 31.280 135.868 72.024 1.00 40.28 C
ATOM 22 N3 A B 507 29.972 135.625 71.987 1.00 40.10 N
ATOM 23 C4 A B 507 29.318 136.644 71.409 1.00 39.88 C
ATOM 24 P A B 508 25.128 137.166 75.697 1.00 42.41 P
ATOM 25 OP1 A B 508 23.988 136.885 76.604 1.00 41.14 O
ATOM 26 OP2 A B 508 25.504 138.573 75.405 1.00 39.43 O
ATOM 27 O5' A B 508 26.426 136.414 76.235 1.00 41.36 O
TER
Atoms:
OP1: (36.177,148.441,72.238)
OP2: (33.736,148.361,71.451)
C3': (35.307,143.586,71.688)
C1': (33.432,142.931,72.970)
C5': (35.782,145.591,73.181)
O6: (27.916,144.720,71.441)
O4': (34.176,143.865,73.739)
C8: (32.151,144.899,72.018)
C2: (29.261,141.687,72.688)
C6: (28.773,143.927,71.837)
C5: (30.167,144.135,71.978)
C4: (30.948,143.108,72.456)
P: (34.793,147.929,72.397)
C4': (35.461,144.117,73.105)
C2': (34.362,142.409,71.871)
O2': (35.044,141.287,72.374)
N1: (28.404,142.644,72.220)
N2: (28.710,140.512,73.012)
N3: (30.567,141.868,72.829)
N7: (30.938,145.256,71.706)
N9: (32.230,143.613,72.493)
O5': (34.833,146.336,72.389)
O3': (36.575,143.201,71.177)
OP2: (33.736,148.361,71.451)
C3': (35.307,143.586,71.688)
C1': (33.432,142.931,72.970)
C5': (35.782,145.591,73.181)
O6: (27.916,144.720,71.441)
O4': (34.176,143.865,73.739)
C8: (32.151,144.899,72.018)
C2: (29.261,141.687,72.688)
C6: (28.773,143.927,71.837)
C5: (30.167,144.135,71.978)
C4: (30.948,143.108,72.456)
P: (34.793,147.929,72.397)
C4': (35.461,144.117,73.105)
C2': (34.362,142.409,71.871)
O2': (35.044,141.287,72.374)
N1: (28.404,142.644,72.220)
N2: (28.710,140.512,73.012)
N3: (30.567,141.868,72.829)
N7: (30.938,145.256,71.706)
N9: (32.230,143.613,72.493)
O5': (34.833,146.336,72.389)
O3': (36.575,143.201,71.177)
OP1: (23.428,140.839,71.678)
OP2: (25.902,141.409,72.018)
C3': (25.628,136.651,73.200)
C1': (26.934,135.753,71.465)
C5': (24.203,137.984,71.584)
O4': (25.727,136.212,70.884)
C8: (27.788,137.969,70.575)
O2': (26.142,134.272,73.188)
C6: (31.268,137.938,71.004)
C5: (29.875,137.807,70.914)
C4: (29.318,136.644,71.409)
P: (24.858,140.538,71.419)
C4': (24.814,136.643,71.924)
C2': (26.659,135.564,72.957)
C2: (31.280,135.868,72.024)
N1: (31.956,136.931,71.582)
N3: (29.972,135.625,71.987)
N6: (31.942,138.996,70.540)
N7: (28.895,138.640,70.397)
N9: (27.969,136.746,71.171)
O5': (25.142,139.037,71.864)
O3': (24.810,136.414,74.322)
OP2: (25.902,141.409,72.018)
C3': (25.628,136.651,73.200)
C1': (26.934,135.753,71.465)
C5': (24.203,137.984,71.584)
O4': (25.727,136.212,70.884)
C8: (27.788,137.969,70.575)
O2': (26.142,134.272,73.188)
C6: (31.268,137.938,71.004)
C5: (29.875,137.807,70.914)
C4: (29.318,136.644,71.409)
P: (24.858,140.538,71.419)
C4': (24.814,136.643,71.924)
C2': (26.659,135.564,72.957)
C2: (31.280,135.868,72.024)
N1: (31.956,136.931,71.582)
N3: (29.972,135.625,71.987)
N6: (31.942,138.996,70.540)
N7: (28.895,138.640,70.397)
N9: (27.969,136.746,71.171)
O5': (25.142,139.037,71.864)
O3': (24.810,136.414,74.322)
Image (generated by PyMOL):