ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1726:A1746

Extra

PDB:
ATOM 1 O3' G A1725 55.673 -11.705 -46.302 1.00 49.44 O
ATOM 2 P A A1726 55.805 -11.907 -44.704 1.00 49.25 P
ATOM 3 OP1 A A1726 56.931 -12.869 -44.481 1.00 38.71 O
ATOM 4 OP2 A A1726 54.443 -12.208 -44.169 1.00 50.26 O
ATOM 5 O5' A A1726 56.294 -10.500 -44.123 1.00 45.83 O
ATOM 6 C5' A A1726 57.474 -9.900 -44.620 1.00 49.07 C
ATOM 7 C4' A A1726 58.273 -9.301 -43.499 1.00 45.71 C
ATOM 8 O4' A A1726 57.382 -8.869 -42.440 1.00 47.94 O
ATOM 9 C3' A A1726 59.285 -10.180 -42.788 1.00 46.31 C
ATOM 10 O3' A A1726 60.486 -10.233 -43.557 1.00 54.92 O
ATOM 11 C2' A A1726 59.487 -9.388 -41.494 1.00 48.64 C
ATOM 12 O2' A A1726 60.275 -8.234 -41.722 1.00 48.16 O
ATOM 13 C1' A A1726 58.075 -8.884 -41.201 1.00 44.91 C
ATOM 14 N9 A A1726 57.333 -9.698 -40.223 1.00 45.06 N
ATOM 15 C8 A A1726 56.358 -10.634 -40.460 1.00 48.43 C
ATOM 16 N7 A A1726 55.883 -11.195 -39.374 1.00 47.22 N
ATOM 17 C5 A A1726 56.586 -10.587 -38.345 1.00 43.57 C
ATOM 18 C6 A A1726 56.527 -10.731 -36.935 1.00 44.69 C
ATOM 19 N6 A A1726 55.679 -11.539 -36.285 1.00 45.73 N
ATOM 20 N1 A A1726 57.379 -9.994 -36.201 1.00 44.72 N
ATOM 21 C2 A A1726 58.211 -9.157 -36.832 1.00 47.22 C
ATOM 22 N3 A A1726 58.341 -8.914 -38.139 1.00 50.44 N
ATOM 23 C4 A A1726 57.490 -9.669 -38.851 1.00 45.42 C
ATOM 24 P A A1727 61.287 -11.631 -43.741 1.00 52.51 P
ATOM 25 OP1 A A1727 62.391 -11.306 -44.689 1.00 45.81 O
ATOM 26 OP2 A A1727 60.356 -12.757 -44.039 1.00 45.73 O
ATOM 27 O5' A A1727 61.959 -11.930 -42.327 1.00 39.87 O
TER

ATOM 1 O3' A B1745 52.281 -8.808 -29.505 1.00 47.90 O
ATOM 2 P G B1746 52.993 -10.156 -29.023 1.00 35.97 P
ATOM 3 OP1 G B1746 51.879 -11.126 -28.948 1.00 50.88 O
ATOM 4 OP2 G B1746 53.787 -9.871 -27.796 1.00 34.64 O
ATOM 5 O5' G B1746 53.950 -10.557 -30.222 1.00 31.17 O
ATOM 6 C5' G B1746 53.453 -11.287 -31.328 1.00 37.87 C
ATOM 7 C4' G B1746 54.589 -11.739 -32.217 1.00 47.40 C
ATOM 8 O4' G B1746 55.229 -10.571 -32.809 1.00 51.66 O
ATOM 9 C3' G B1746 55.756 -12.485 -31.566 1.00 43.97 C
ATOM 10 O3' G B1746 55.582 -13.876 -31.357 1.00 44.05 O
ATOM 11 C2' G B1746 56.873 -12.280 -32.571 1.00 42.70 C
ATOM 12 O2' G B1746 56.723 -13.195 -33.642 1.00 41.38 O
ATOM 13 C1' G B1746 56.615 -10.843 -33.026 1.00 46.80 C
ATOM 14 N9 G B1746 57.439 -9.926 -32.230 1.00 43.55 N
ATOM 15 C8 G B1746 57.033 -9.039 -31.259 1.00 40.34 C
ATOM 16 N7 G B1746 58.026 -8.423 -30.679 1.00 41.27 N
ATOM 17 C5 G B1746 59.161 -8.922 -31.312 1.00 45.16 C
ATOM 18 C6 G B1746 60.545 -8.650 -31.094 1.00 42.11 C
ATOM 19 O6 G B1746 61.066 -7.923 -30.243 1.00 47.03 O
ATOM 20 N1 G B1746 61.351 -9.355 -31.977 1.00 38.38 N
ATOM 21 C2 G B1746 60.904 -10.235 -32.921 1.00 41.61 C
ATOM 22 N2 G B1746 61.851 -10.819 -33.663 1.00 47.65 N
ATOM 23 N3 G B1746 59.629 -10.524 -33.120 1.00 44.92 N
ATOM 24 C4 G B1746 58.816 -9.830 -32.288 1.00 45.92 C
ATOM 25 P G B1747 56.580 -14.627 -30.354 1.00 51.77 P
ATOM 26 OP1 G B1747 56.082 -15.991 -30.041 1.00 49.43 O
ATOM 27 OP2 G B1747 56.797 -13.658 -29.251 1.00 42.91 O
ATOM 28 O5' G B1747 57.950 -14.752 -31.166 1.00 45.05 O
TER

Atoms:
OP1: (56.931,-12.869,-44.481)
OP2: (54.443,-12.208,-44.169)
C3': (59.285,-10.180,-42.788)
C1': (58.075,-8.884,-41.201)
C5': (57.474,-9.900,-44.620)
O4': (57.382,-8.869,-42.440)
C8: (56.358,-10.634,-40.460)
O2': (60.275,-8.234,-41.722)
C6: (56.527,-10.731,-36.935)
C5: (56.586,-10.587,-38.345)
C4: (57.490,-9.669,-38.851)
P: (55.805,-11.907,-44.704)
C4': (58.273,-9.301,-43.499)
C2': (59.487,-9.388,-41.494)
C2: (58.211,-9.157,-36.832)
N1: (57.379,-9.994,-36.201)
N3: (58.341,-8.914,-38.139)
N6: (55.679,-11.539,-36.285)
N7: (55.883,-11.195,-39.374)
N9: (57.333,-9.698,-40.223)
O5': (56.294,-10.500,-44.123)
O3': (60.486,-10.233,-43.557)
OP1: (51.879,-11.126,-28.948)
OP2: (53.787,-9.871,-27.796)
C3': (55.756,-12.485,-31.566)
C1': (56.615,-10.843,-33.026)
C5': (53.453,-11.287,-31.328)
O6: (61.066,-7.923,-30.243)
O4': (55.229,-10.571,-32.809)
C8: (57.033,-9.039,-31.259)
C2: (60.904,-10.235,-32.921)
C6: (60.545,-8.650,-31.094)
C5: (59.161,-8.922,-31.312)
C4: (58.816,-9.830,-32.288)
P: (52.993,-10.156,-29.023)
C4': (54.589,-11.739,-32.217)
C2': (56.873,-12.280,-32.571)
O2': (56.723,-13.195,-33.642)
N1: (61.351,-9.355,-31.977)
N2: (61.851,-10.819,-33.663)
N3: (59.629,-10.524,-33.120)
N7: (58.026,-8.423,-30.679)
N9: (57.439,-9.926,-32.230)
O5': (53.950,-10.557,-30.222)
O3': (55.582,-13.876,-31.357)
Image (generated by PyMOL):
PyMOL image
show in jmol