Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0940:0972
Extra
PDB:
ATOM 1 O3' G A 939 54.464 63.711 100.035 1.00 50.31 O
ATOM 2 P G A 940 56.043 63.664 100.261 1.00 50.19 P
ATOM 3 OP1 G A 940 56.678 64.023 98.963 1.00 50.18 O
ATOM 4 OP2 G A 940 56.373 62.371 100.915 1.00 48.36 O
ATOM 5 O5' G A 940 56.292 64.859 101.275 1.00 50.84 O
ATOM 6 C5' G A 940 57.167 64.708 102.386 1.00 53.29 C
ATOM 7 C4' G A 940 56.474 65.152 103.644 1.00 53.52 C
ATOM 8 O4' G A 940 55.218 64.437 103.771 1.00 54.16 O
ATOM 9 C3' G A 940 57.250 64.880 104.922 1.00 53.61 C
ATOM 10 O3' G A 940 56.911 65.875 105.871 1.00 52.70 O
ATOM 11 C2' G A 940 56.688 63.536 105.359 1.00 54.47 C
ATOM 12 O2' G A 940 56.822 63.327 106.745 1.00 57.48 O
ATOM 13 C1' G A 940 55.220 63.689 104.969 1.00 55.71 C
ATOM 14 N9 G A 940 54.546 62.421 104.715 1.00 57.33 N
ATOM 15 C8 G A 940 54.921 61.461 103.809 1.00 58.74 C
ATOM 16 N7 G A 940 54.138 60.419 103.815 1.00 60.37 N
ATOM 17 C5 G A 940 53.185 60.707 104.784 1.00 60.32 C
ATOM 18 C6 G A 940 52.076 59.939 105.246 1.00 60.83 C
ATOM 19 O6 G A 940 51.718 58.803 104.895 1.00 61.96 O
ATOM 20 N1 G A 940 51.361 60.617 106.225 1.00 60.30 N
ATOM 21 C2 G A 940 51.673 61.857 106.710 1.00 58.84 C
ATOM 22 N2 G A 940 50.859 62.331 107.654 1.00 58.58 N
ATOM 23 N3 G A 940 52.706 62.577 106.301 1.00 58.61 N
ATOM 24 C4 G A 940 53.414 61.944 105.341 1.00 58.66 C
ATOM 25 P U A 941 57.718 67.261 105.893 1.00 53.09 P
ATOM 26 OP1 U A 941 57.946 67.682 104.486 1.00 50.92 O
ATOM 27 OP2 U A 941 58.871 67.142 106.820 1.00 52.61 O
ATOM 28 O5' U A 941 56.686 68.273 106.547 1.00 49.34 O
TER
ATOM 1 O3' A B 971 48.065 59.946 110.154 1.00 47.70 O
ATOM 2 P A B 972 47.856 60.035 108.571 1.00 46.51 P
ATOM 3 OP1 A B 972 46.514 59.503 108.267 1.00 46.90 O
ATOM 4 OP2 A B 972 49.051 59.439 107.909 1.00 45.69 O
ATOM 5 O5' A B 972 47.852 61.602 108.311 1.00 46.23 O
ATOM 6 C5' A B 972 46.623 62.319 108.134 1.00 44.75 C
ATOM 7 C4' A B 972 46.065 62.740 109.467 1.00 42.76 C
ATOM 8 O4' A B 972 47.094 63.386 110.254 1.00 44.50 O
ATOM 9 C3' A B 972 44.971 63.780 109.362 1.00 43.25 C
ATOM 10 O3' A B 972 43.725 63.181 109.079 1.00 44.94 O
ATOM 11 C2' A B 972 45.039 64.459 110.718 1.00 43.16 C
ATOM 12 O2' A B 972 44.452 63.689 111.746 1.00 42.84 O
ATOM 13 C1' A B 972 46.552 64.511 110.930 1.00 43.84 C
ATOM 14 N9 A B 972 47.170 65.709 110.356 1.00 45.49 N
ATOM 15 C8 A B 972 48.119 65.747 109.369 1.00 44.46 C
ATOM 16 N7 A B 972 48.500 66.954 109.048 1.00 45.40 N
ATOM 17 C5 A B 972 47.753 67.774 109.878 1.00 45.40 C
ATOM 18 C6 A B 972 47.700 69.169 110.027 1.00 46.38 C
ATOM 19 N6 A B 972 48.435 70.020 109.307 1.00 45.31 N
ATOM 20 N1 A B 972 46.850 69.671 110.949 1.00 48.05 N
ATOM 21 C2 A B 972 46.105 68.821 111.661 1.00 47.66 C
ATOM 22 N3 A B 972 46.064 67.492 111.610 1.00 48.79 N
ATOM 23 C4 A B 972 46.925 67.023 110.688 1.00 46.70 C
ATOM 24 P A B 973 42.937 63.597 107.747 1.00 46.41 P
ATOM 25 OP1 A B 973 41.716 62.745 107.691 1.00 44.72 O
ATOM 26 OP2 A B 973 43.901 63.575 106.613 1.00 45.95 O
ATOM 27 O5' A B 973 42.518 65.113 108.019 1.00 44.67 O
TER
ATOM 2 P G A 940 56.043 63.664 100.261 1.00 50.19 P
ATOM 3 OP1 G A 940 56.678 64.023 98.963 1.00 50.18 O
ATOM 4 OP2 G A 940 56.373 62.371 100.915 1.00 48.36 O
ATOM 5 O5' G A 940 56.292 64.859 101.275 1.00 50.84 O
ATOM 6 C5' G A 940 57.167 64.708 102.386 1.00 53.29 C
ATOM 7 C4' G A 940 56.474 65.152 103.644 1.00 53.52 C
ATOM 8 O4' G A 940 55.218 64.437 103.771 1.00 54.16 O
ATOM 9 C3' G A 940 57.250 64.880 104.922 1.00 53.61 C
ATOM 10 O3' G A 940 56.911 65.875 105.871 1.00 52.70 O
ATOM 11 C2' G A 940 56.688 63.536 105.359 1.00 54.47 C
ATOM 12 O2' G A 940 56.822 63.327 106.745 1.00 57.48 O
ATOM 13 C1' G A 940 55.220 63.689 104.969 1.00 55.71 C
ATOM 14 N9 G A 940 54.546 62.421 104.715 1.00 57.33 N
ATOM 15 C8 G A 940 54.921 61.461 103.809 1.00 58.74 C
ATOM 16 N7 G A 940 54.138 60.419 103.815 1.00 60.37 N
ATOM 17 C5 G A 940 53.185 60.707 104.784 1.00 60.32 C
ATOM 18 C6 G A 940 52.076 59.939 105.246 1.00 60.83 C
ATOM 19 O6 G A 940 51.718 58.803 104.895 1.00 61.96 O
ATOM 20 N1 G A 940 51.361 60.617 106.225 1.00 60.30 N
ATOM 21 C2 G A 940 51.673 61.857 106.710 1.00 58.84 C
ATOM 22 N2 G A 940 50.859 62.331 107.654 1.00 58.58 N
ATOM 23 N3 G A 940 52.706 62.577 106.301 1.00 58.61 N
ATOM 24 C4 G A 940 53.414 61.944 105.341 1.00 58.66 C
ATOM 25 P U A 941 57.718 67.261 105.893 1.00 53.09 P
ATOM 26 OP1 U A 941 57.946 67.682 104.486 1.00 50.92 O
ATOM 27 OP2 U A 941 58.871 67.142 106.820 1.00 52.61 O
ATOM 28 O5' U A 941 56.686 68.273 106.547 1.00 49.34 O
TER
ATOM 1 O3' A B 971 48.065 59.946 110.154 1.00 47.70 O
ATOM 2 P A B 972 47.856 60.035 108.571 1.00 46.51 P
ATOM 3 OP1 A B 972 46.514 59.503 108.267 1.00 46.90 O
ATOM 4 OP2 A B 972 49.051 59.439 107.909 1.00 45.69 O
ATOM 5 O5' A B 972 47.852 61.602 108.311 1.00 46.23 O
ATOM 6 C5' A B 972 46.623 62.319 108.134 1.00 44.75 C
ATOM 7 C4' A B 972 46.065 62.740 109.467 1.00 42.76 C
ATOM 8 O4' A B 972 47.094 63.386 110.254 1.00 44.50 O
ATOM 9 C3' A B 972 44.971 63.780 109.362 1.00 43.25 C
ATOM 10 O3' A B 972 43.725 63.181 109.079 1.00 44.94 O
ATOM 11 C2' A B 972 45.039 64.459 110.718 1.00 43.16 C
ATOM 12 O2' A B 972 44.452 63.689 111.746 1.00 42.84 O
ATOM 13 C1' A B 972 46.552 64.511 110.930 1.00 43.84 C
ATOM 14 N9 A B 972 47.170 65.709 110.356 1.00 45.49 N
ATOM 15 C8 A B 972 48.119 65.747 109.369 1.00 44.46 C
ATOM 16 N7 A B 972 48.500 66.954 109.048 1.00 45.40 N
ATOM 17 C5 A B 972 47.753 67.774 109.878 1.00 45.40 C
ATOM 18 C6 A B 972 47.700 69.169 110.027 1.00 46.38 C
ATOM 19 N6 A B 972 48.435 70.020 109.307 1.00 45.31 N
ATOM 20 N1 A B 972 46.850 69.671 110.949 1.00 48.05 N
ATOM 21 C2 A B 972 46.105 68.821 111.661 1.00 47.66 C
ATOM 22 N3 A B 972 46.064 67.492 111.610 1.00 48.79 N
ATOM 23 C4 A B 972 46.925 67.023 110.688 1.00 46.70 C
ATOM 24 P A B 973 42.937 63.597 107.747 1.00 46.41 P
ATOM 25 OP1 A B 973 41.716 62.745 107.691 1.00 44.72 O
ATOM 26 OP2 A B 973 43.901 63.575 106.613 1.00 45.95 O
ATOM 27 O5' A B 973 42.518 65.113 108.019 1.00 44.67 O
TER
Atoms:
OP1: (56.678,64.023,98.963)
OP2: (56.373,62.371,100.915)
C3': (57.250,64.880,104.922)
C1': (55.220,63.689,104.969)
C5': (57.167,64.708,102.386)
O6: (51.718,58.803,104.895)
O4': (55.218,64.437,103.771)
C8: (54.921,61.461,103.809)
C2: (51.673,61.857,106.710)
C6: (52.076,59.939,105.246)
C5: (53.185,60.707,104.784)
C4: (53.414,61.944,105.341)
P: (56.043,63.664,100.261)
C4': (56.474,65.152,103.644)
C2': (56.688,63.536,105.359)
O2': (56.822,63.327,106.745)
N1: (51.361,60.617,106.225)
N2: (50.859,62.331,107.654)
N3: (52.706,62.577,106.301)
N7: (54.138,60.419,103.815)
N9: (54.546,62.421,104.715)
O5': (56.292,64.859,101.275)
O3': (56.911,65.875,105.871)
OP2: (56.373,62.371,100.915)
C3': (57.250,64.880,104.922)
C1': (55.220,63.689,104.969)
C5': (57.167,64.708,102.386)
O6: (51.718,58.803,104.895)
O4': (55.218,64.437,103.771)
C8: (54.921,61.461,103.809)
C2: (51.673,61.857,106.710)
C6: (52.076,59.939,105.246)
C5: (53.185,60.707,104.784)
C4: (53.414,61.944,105.341)
P: (56.043,63.664,100.261)
C4': (56.474,65.152,103.644)
C2': (56.688,63.536,105.359)
O2': (56.822,63.327,106.745)
N1: (51.361,60.617,106.225)
N2: (50.859,62.331,107.654)
N3: (52.706,62.577,106.301)
N7: (54.138,60.419,103.815)
N9: (54.546,62.421,104.715)
O5': (56.292,64.859,101.275)
O3': (56.911,65.875,105.871)
OP1: (46.514,59.503,108.267)
OP2: (49.051,59.439,107.909)
C3': (44.971,63.780,109.362)
C1': (46.552,64.511,110.930)
C5': (46.623,62.319,108.134)
O4': (47.094,63.386,110.254)
C8: (48.119,65.747,109.369)
O2': (44.452,63.689,111.746)
C6: (47.700,69.169,110.027)
C5: (47.753,67.774,109.878)
C4: (46.925,67.023,110.688)
P: (47.856,60.035,108.571)
C4': (46.065,62.740,109.467)
C2': (45.039,64.459,110.718)
C2: (46.105,68.821,111.661)
N1: (46.850,69.671,110.949)
N3: (46.064,67.492,111.610)
N6: (48.435,70.020,109.307)
N7: (48.500,66.954,109.048)
N9: (47.170,65.709,110.356)
O5': (47.852,61.602,108.311)
O3': (43.725,63.181,109.079)
OP2: (49.051,59.439,107.909)
C3': (44.971,63.780,109.362)
C1': (46.552,64.511,110.930)
C5': (46.623,62.319,108.134)
O4': (47.094,63.386,110.254)
C8: (48.119,65.747,109.369)
O2': (44.452,63.689,111.746)
C6: (47.700,69.169,110.027)
C5: (47.753,67.774,109.878)
C4: (46.925,67.023,110.688)
P: (47.856,60.035,108.571)
C4': (46.065,62.740,109.467)
C2': (45.039,64.459,110.718)
C2: (46.105,68.821,111.661)
N1: (46.850,69.671,110.949)
N3: (46.064,67.492,111.610)
N6: (48.435,70.020,109.307)
N7: (48.500,66.954,109.048)
N9: (47.170,65.709,110.356)
O5': (47.852,61.602,108.311)
O3': (43.725,63.181,109.079)
Image (generated by PyMOL):