Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52084:52123
Extra
PDB:
ATOM 1 O3' G A2083 197.964 -11.391 235.297 1.00 50.62 O
ATOM 2 P G A2084 198.971 -10.177 235.170 1.00 48.28 P
ATOM 3 OP1 G A2084 200.359 -10.732 235.258 1.00 48.63 O
ATOM 4 OP2 G A2084 198.530 -9.148 236.149 1.00 47.97 O
ATOM 5 O5' G A2084 198.686 -9.683 233.711 1.00 48.35 O
ATOM 6 C5' G A2084 197.395 -9.249 233.349 1.00 48.08 C
ATOM 7 C4' G A2084 197.445 -7.846 232.860 1.00 48.01 C
ATOM 8 O4' G A2084 196.201 -7.513 232.205 1.00 47.81 O
ATOM 9 C3' G A2084 197.665 -6.782 233.926 1.00 47.82 C
ATOM 10 O3' G A2084 198.403 -5.708 233.303 1.00 47.96 O
ATOM 11 C2' G A2084 196.221 -6.360 234.211 1.00 47.45 C
ATOM 12 O2' G A2084 196.080 -5.119 234.873 1.00 47.24 O
ATOM 13 C1' G A2084 195.669 -6.351 232.790 1.00 47.52 C
ATOM 14 N9 G A2084 194.225 -6.438 232.659 1.00 47.27 N
ATOM 15 C8 G A2084 193.279 -6.966 233.487 1.00 47.03 C
ATOM 16 N7 G A2084 192.088 -6.911 232.946 1.00 46.87 N
ATOM 17 C5 G A2084 192.271 -6.358 231.689 1.00 47.02 C
ATOM 18 C6 G A2084 191.334 -6.048 230.657 1.00 46.97 C
ATOM 19 O6 G A2084 190.101 -6.230 230.610 1.00 46.77 O
ATOM 20 N1 G A2084 191.943 -5.488 229.556 1.00 47.19 N
ATOM 21 C2 G A2084 193.278 -5.265 229.437 1.00 47.43 C
ATOM 22 N2 G A2084 193.618 -4.738 228.241 1.00 47.63 N
ATOM 23 N3 G A2084 194.172 -5.540 230.389 1.00 47.49 N
ATOM 24 C4 G A2084 193.594 -6.081 231.487 1.00 47.27 C
ATOM 25 P U A2085 198.900 -4.406 234.116 1.00 47.40 P
ATOM 26 OP1 U A2085 199.278 -4.827 235.477 1.00 47.36 O
ATOM 27 OP2 U A2085 197.839 -3.397 233.966 1.00 47.12 O
ATOM 28 O5' U A2085 200.205 -3.960 233.298 1.00 47.75 O
TER
ATOM 1 O3' G B2122 190.797 -2.064 226.480 1.00 46.72 O
ATOM 2 P A B2123 190.782 -3.595 226.128 1.00 43.55 P
ATOM 3 OP1 A B2123 190.006 -3.710 224.892 1.00 43.63 O
ATOM 4 OP2 A B2123 190.333 -4.331 227.333 1.00 43.34 O
ATOM 5 O5' A B2123 192.305 -3.916 225.851 1.00 43.90 O
ATOM 6 C5' A B2123 192.766 -4.100 224.528 1.00 44.22 C
ATOM 7 C4' A B2123 193.053 -2.786 223.874 1.00 44.29 C
ATOM 8 O4' A B2123 193.917 -2.034 224.721 1.00 44.25 O
ATOM 9 C3' A B2123 193.773 -2.857 222.551 1.00 44.67 C
ATOM 10 O3' A B2123 192.874 -2.979 221.475 1.00 44.72 O
ATOM 11 C2' A B2123 194.544 -1.560 222.508 1.00 44.74 C
ATOM 12 O2' A B2123 193.723 -0.537 222.021 1.00 44.60 O
ATOM 13 C1' A B2123 194.811 -1.283 223.968 1.00 44.51 C
ATOM 14 N9 A B2123 196.186 -1.624 224.382 1.00 44.73 N
ATOM 15 C8 A B2123 196.566 -2.483 225.357 1.00 44.70 C
ATOM 16 N7 A B2123 197.851 -2.552 225.526 1.00 44.94 N
ATOM 17 C5 A B2123 198.343 -1.637 224.639 1.00 45.13 C
ATOM 18 C6 A B2123 199.642 -1.227 224.339 1.00 45.44 C
ATOM 19 N6 A B2123 200.742 -1.707 224.949 1.00 45.60 N
ATOM 20 N1 A B2123 199.799 -0.287 223.392 1.00 45.58 N
ATOM 21 C2 A B2123 198.707 0.192 222.814 1.00 45.42 C
ATOM 22 N3 A B2123 197.448 -0.132 223.010 1.00 45.14 N
ATOM 23 C4 A B2123 197.336 -1.061 223.939 1.00 45.01 C
ATOM 24 P A B2124 193.222 -3.864 220.191 1.00 46.93 P
ATOM 25 OP1 A B2124 192.657 -5.194 220.419 1.00 46.89 O
ATOM 26 OP2 A B2124 194.649 -3.735 219.917 1.00 47.25 O
ATOM 27 O5' A B2124 192.411 -3.124 219.059 1.00 46.95 O
TER
ATOM 2 P G A2084 198.971 -10.177 235.170 1.00 48.28 P
ATOM 3 OP1 G A2084 200.359 -10.732 235.258 1.00 48.63 O
ATOM 4 OP2 G A2084 198.530 -9.148 236.149 1.00 47.97 O
ATOM 5 O5' G A2084 198.686 -9.683 233.711 1.00 48.35 O
ATOM 6 C5' G A2084 197.395 -9.249 233.349 1.00 48.08 C
ATOM 7 C4' G A2084 197.445 -7.846 232.860 1.00 48.01 C
ATOM 8 O4' G A2084 196.201 -7.513 232.205 1.00 47.81 O
ATOM 9 C3' G A2084 197.665 -6.782 233.926 1.00 47.82 C
ATOM 10 O3' G A2084 198.403 -5.708 233.303 1.00 47.96 O
ATOM 11 C2' G A2084 196.221 -6.360 234.211 1.00 47.45 C
ATOM 12 O2' G A2084 196.080 -5.119 234.873 1.00 47.24 O
ATOM 13 C1' G A2084 195.669 -6.351 232.790 1.00 47.52 C
ATOM 14 N9 G A2084 194.225 -6.438 232.659 1.00 47.27 N
ATOM 15 C8 G A2084 193.279 -6.966 233.487 1.00 47.03 C
ATOM 16 N7 G A2084 192.088 -6.911 232.946 1.00 46.87 N
ATOM 17 C5 G A2084 192.271 -6.358 231.689 1.00 47.02 C
ATOM 18 C6 G A2084 191.334 -6.048 230.657 1.00 46.97 C
ATOM 19 O6 G A2084 190.101 -6.230 230.610 1.00 46.77 O
ATOM 20 N1 G A2084 191.943 -5.488 229.556 1.00 47.19 N
ATOM 21 C2 G A2084 193.278 -5.265 229.437 1.00 47.43 C
ATOM 22 N2 G A2084 193.618 -4.738 228.241 1.00 47.63 N
ATOM 23 N3 G A2084 194.172 -5.540 230.389 1.00 47.49 N
ATOM 24 C4 G A2084 193.594 -6.081 231.487 1.00 47.27 C
ATOM 25 P U A2085 198.900 -4.406 234.116 1.00 47.40 P
ATOM 26 OP1 U A2085 199.278 -4.827 235.477 1.00 47.36 O
ATOM 27 OP2 U A2085 197.839 -3.397 233.966 1.00 47.12 O
ATOM 28 O5' U A2085 200.205 -3.960 233.298 1.00 47.75 O
TER
ATOM 1 O3' G B2122 190.797 -2.064 226.480 1.00 46.72 O
ATOM 2 P A B2123 190.782 -3.595 226.128 1.00 43.55 P
ATOM 3 OP1 A B2123 190.006 -3.710 224.892 1.00 43.63 O
ATOM 4 OP2 A B2123 190.333 -4.331 227.333 1.00 43.34 O
ATOM 5 O5' A B2123 192.305 -3.916 225.851 1.00 43.90 O
ATOM 6 C5' A B2123 192.766 -4.100 224.528 1.00 44.22 C
ATOM 7 C4' A B2123 193.053 -2.786 223.874 1.00 44.29 C
ATOM 8 O4' A B2123 193.917 -2.034 224.721 1.00 44.25 O
ATOM 9 C3' A B2123 193.773 -2.857 222.551 1.00 44.67 C
ATOM 10 O3' A B2123 192.874 -2.979 221.475 1.00 44.72 O
ATOM 11 C2' A B2123 194.544 -1.560 222.508 1.00 44.74 C
ATOM 12 O2' A B2123 193.723 -0.537 222.021 1.00 44.60 O
ATOM 13 C1' A B2123 194.811 -1.283 223.968 1.00 44.51 C
ATOM 14 N9 A B2123 196.186 -1.624 224.382 1.00 44.73 N
ATOM 15 C8 A B2123 196.566 -2.483 225.357 1.00 44.70 C
ATOM 16 N7 A B2123 197.851 -2.552 225.526 1.00 44.94 N
ATOM 17 C5 A B2123 198.343 -1.637 224.639 1.00 45.13 C
ATOM 18 C6 A B2123 199.642 -1.227 224.339 1.00 45.44 C
ATOM 19 N6 A B2123 200.742 -1.707 224.949 1.00 45.60 N
ATOM 20 N1 A B2123 199.799 -0.287 223.392 1.00 45.58 N
ATOM 21 C2 A B2123 198.707 0.192 222.814 1.00 45.42 C
ATOM 22 N3 A B2123 197.448 -0.132 223.010 1.00 45.14 N
ATOM 23 C4 A B2123 197.336 -1.061 223.939 1.00 45.01 C
ATOM 24 P A B2124 193.222 -3.864 220.191 1.00 46.93 P
ATOM 25 OP1 A B2124 192.657 -5.194 220.419 1.00 46.89 O
ATOM 26 OP2 A B2124 194.649 -3.735 219.917 1.00 47.25 O
ATOM 27 O5' A B2124 192.411 -3.124 219.059 1.00 46.95 O
TER
Atoms:
OP1: (200.359,-10.732,235.258)
OP2: (198.530,-9.148,236.149)
C3': (197.665,-6.782,233.926)
C1': (195.669,-6.351,232.790)
C5': (197.395,-9.249,233.349)
O6: (190.101,-6.230,230.610)
O4': (196.201,-7.513,232.205)
C8: (193.279,-6.966,233.487)
C2: (193.278,-5.265,229.437)
C6: (191.334,-6.048,230.657)
C5: (192.271,-6.358,231.689)
C4: (193.594,-6.081,231.487)
P: (198.971,-10.177,235.170)
C4': (197.445,-7.846,232.860)
C2': (196.221,-6.360,234.211)
O2': (196.080,-5.119,234.873)
N1: (191.943,-5.488,229.556)
N2: (193.618,-4.738,228.241)
N3: (194.172,-5.540,230.389)
N7: (192.088,-6.911,232.946)
N9: (194.225,-6.438,232.659)
O5': (198.686,-9.683,233.711)
O3': (198.403,-5.708,233.303)
OP2: (198.530,-9.148,236.149)
C3': (197.665,-6.782,233.926)
C1': (195.669,-6.351,232.790)
C5': (197.395,-9.249,233.349)
O6: (190.101,-6.230,230.610)
O4': (196.201,-7.513,232.205)
C8: (193.279,-6.966,233.487)
C2: (193.278,-5.265,229.437)
C6: (191.334,-6.048,230.657)
C5: (192.271,-6.358,231.689)
C4: (193.594,-6.081,231.487)
P: (198.971,-10.177,235.170)
C4': (197.445,-7.846,232.860)
C2': (196.221,-6.360,234.211)
O2': (196.080,-5.119,234.873)
N1: (191.943,-5.488,229.556)
N2: (193.618,-4.738,228.241)
N3: (194.172,-5.540,230.389)
N7: (192.088,-6.911,232.946)
N9: (194.225,-6.438,232.659)
O5': (198.686,-9.683,233.711)
O3': (198.403,-5.708,233.303)
OP1: (190.006,-3.710,224.892)
OP2: (190.333,-4.331,227.333)
C3': (193.773,-2.857,222.551)
C1': (194.811,-1.283,223.968)
C5': (192.766,-4.100,224.528)
O4': (193.917,-2.034,224.721)
C8: (196.566,-2.483,225.357)
O2': (193.723,-0.537,222.021)
C6: (199.642,-1.227,224.339)
C5: (198.343,-1.637,224.639)
C4: (197.336,-1.061,223.939)
P: (190.782,-3.595,226.128)
C4': (193.053,-2.786,223.874)
C2': (194.544,-1.560,222.508)
C2: (198.707,0.192,222.814)
N1: (199.799,-0.287,223.392)
N3: (197.448,-0.132,223.010)
N6: (200.742,-1.707,224.949)
N7: (197.851,-2.552,225.526)
N9: (196.186,-1.624,224.382)
O5': (192.305,-3.916,225.851)
O3': (192.874,-2.979,221.475)
OP2: (190.333,-4.331,227.333)
C3': (193.773,-2.857,222.551)
C1': (194.811,-1.283,223.968)
C5': (192.766,-4.100,224.528)
O4': (193.917,-2.034,224.721)
C8: (196.566,-2.483,225.357)
O2': (193.723,-0.537,222.021)
C6: (199.642,-1.227,224.339)
C5: (198.343,-1.637,224.639)
C4: (197.336,-1.061,223.939)
P: (190.782,-3.595,226.128)
C4': (193.053,-2.786,223.874)
C2': (194.544,-1.560,222.508)
C2: (198.707,0.192,222.814)
N1: (199.799,-0.287,223.392)
N3: (197.448,-0.132,223.010)
N6: (200.742,-1.707,224.949)
N7: (197.851,-2.552,225.526)
N9: (196.186,-1.624,224.382)
O5': (192.305,-3.916,225.851)
O3': (192.874,-2.979,221.475)
Image (generated by PyMOL):