ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1313:A1316

Extra

PDB:
ATOM 1 O3' C A1312 56.574 -26.007 -57.135 1.00 31.15 O
ATOM 2 P G A1313 57.237 -26.845 -58.326 1.00 49.99 P
ATOM 3 OP1 G A1313 58.505 -26.136 -58.678 1.00 44.65 O
ATOM 4 OP2 G A1313 56.207 -27.028 -59.368 1.00 49.11 O
ATOM 5 O5' G A1313 57.557 -28.251 -57.656 1.00 35.27 O
ATOM 6 C5' G A1313 58.536 -28.360 -56.647 1.00 37.00 C
ATOM 7 C4' G A1313 58.415 -29.654 -55.909 1.00 33.07 C
ATOM 8 O4' G A1313 57.045 -29.834 -55.489 1.00 34.52 O
ATOM 9 C3' G A1313 58.724 -30.910 -56.710 1.00 39.29 C
ATOM 10 O3' G A1313 60.108 -31.175 -56.834 1.00 40.37 O
ATOM 11 C2' G A1313 57.977 -31.969 -55.932 1.00 46.44 C
ATOM 12 O2' G A1313 58.673 -32.286 -54.738 1.00 36.52 O
ATOM 13 C1' G A1313 56.701 -31.200 -55.575 1.00 47.30 C
ATOM 14 N9 G A1313 55.684 -31.351 -56.629 1.00 48.67 N
ATOM 15 C8 G A1313 55.216 -30.407 -57.515 1.00 49.71 C
ATOM 16 N7 G A1313 54.339 -30.889 -58.353 1.00 50.06 N
ATOM 17 C5 G A1313 54.249 -32.231 -58.015 1.00 48.69 C
ATOM 18 C6 G A1313 53.467 -33.272 -58.572 1.00 52.91 C
ATOM 19 O6 G A1313 52.654 -33.241 -59.506 1.00 60.07 O
ATOM 20 N1 G A1313 53.708 -34.467 -57.915 1.00 49.91 N
ATOM 21 C2 G A1313 54.565 -34.645 -56.866 1.00 45.23 C
ATOM 22 N2 G A1313 54.619 -35.883 -56.389 1.00 45.15 N
ATOM 23 N3 G A1313 55.302 -33.699 -56.327 1.00 46.40 N
ATOM 24 C4 G A1313 55.081 -32.530 -56.957 1.00 48.37 C
ATOM 25 P A A1314 60.916 -30.685 -58.139 1.00 43.80 P
ATOM 26 OP1 A A1314 62.152 -30.019 -57.652 1.00 48.12 O
ATOM 27 OP2 A A1314 59.972 -29.914 -58.979 1.00 41.38 O
ATOM 28 O5' A A1314 61.282 -32.045 -58.864 1.00 28.42 O
TER

ATOM 1 O3' A B1315 54.460 -39.072 -59.811 1.00 30.83 O
ATOM 2 P A B1316 53.296 -39.033 -58.729 1.00 37.01 P
ATOM 3 OP1 A B1316 52.013 -39.247 -59.455 1.00 38.99 O
ATOM 4 OP2 A B1316 53.479 -37.786 -57.934 1.00 38.39 O
ATOM 5 O5' A B1316 53.633 -40.293 -57.836 1.00 36.54 O
ATOM 6 C5' A B1316 52.661 -40.861 -56.987 1.00 41.25 C
ATOM 7 C4' A B1316 53.291 -41.816 -56.023 1.00 38.13 C
ATOM 8 O4' A B1316 54.730 -41.622 -56.042 1.00 40.85 O
ATOM 9 C3' A B1316 52.910 -41.619 -54.565 1.00 34.91 C
ATOM 10 O3' A B1316 51.702 -42.258 -54.223 1.00 34.86 O
ATOM 11 C2' A B1316 54.106 -42.193 -53.853 1.00 45.62 C
ATOM 12 O2' A B1316 54.097 -43.601 -53.980 1.00 58.84 O
ATOM 13 C1' A B1316 55.227 -41.657 -54.725 1.00 44.50 C
ATOM 14 N9 A B1316 55.617 -40.285 -54.333 1.00 41.56 N
ATOM 15 C8 A B1316 55.512 -39.148 -55.074 1.00 41.11 C
ATOM 16 N7 A B1316 55.943 -38.081 -54.455 1.00 42.86 N
ATOM 17 C5 A B1316 56.360 -38.538 -53.231 1.00 40.52 C
ATOM 18 C6 A B1316 56.921 -37.885 -52.138 1.00 43.04 C
ATOM 19 N6 A B1316 57.163 -36.574 -52.071 1.00 57.53 N
ATOM 20 N1 A B1316 57.235 -38.621 -51.083 1.00 33.52 N
ATOM 21 C2 A B1316 56.985 -39.915 -51.154 1.00 42.83 C
ATOM 22 N3 A B1316 56.452 -40.644 -52.111 1.00 36.64 N
ATOM 23 C4 A B1316 56.162 -39.882 -53.143 1.00 38.79 C
ATOM 24 P G B1317 50.319 -41.453 -54.265 1.00 42.13 P
ATOM 25 OP1 G B1317 49.391 -42.140 -53.347 1.00 47.48 O
ATOM 26 OP2 G B1317 49.932 -41.302 -55.692 1.00 50.36 O
ATOM 27 O5' G B1317 50.710 -40.050 -53.671 1.00 35.68 O
TER

Atoms:
OP1: (58.505,-26.136,-58.678)
OP2: (56.207,-27.028,-59.368)
C3': (58.724,-30.910,-56.710)
C1': (56.701,-31.200,-55.575)
C5': (58.536,-28.360,-56.647)
O6: (52.654,-33.241,-59.506)
O4': (57.045,-29.834,-55.489)
C8: (55.216,-30.407,-57.515)
C2: (54.565,-34.645,-56.866)
C6: (53.467,-33.272,-58.572)
C5: (54.249,-32.231,-58.015)
C4: (55.081,-32.530,-56.957)
P: (57.237,-26.845,-58.326)
C4': (58.415,-29.654,-55.909)
C2': (57.977,-31.969,-55.932)
O2': (58.673,-32.286,-54.738)
N1: (53.708,-34.467,-57.915)
N2: (54.619,-35.883,-56.389)
N3: (55.302,-33.699,-56.327)
N7: (54.339,-30.889,-58.353)
N9: (55.684,-31.351,-56.629)
O5': (57.557,-28.251,-57.656)
O3': (60.108,-31.175,-56.834)
OP1: (52.013,-39.247,-59.455)
OP2: (53.479,-37.786,-57.934)
C3': (52.910,-41.619,-54.565)
C1': (55.227,-41.657,-54.725)
C5': (52.661,-40.861,-56.987)
O4': (54.730,-41.622,-56.042)
C8: (55.512,-39.148,-55.074)
O2': (54.097,-43.601,-53.980)
C6: (56.921,-37.885,-52.138)
C5: (56.360,-38.538,-53.231)
C4: (56.162,-39.882,-53.143)
P: (53.296,-39.033,-58.729)
C4': (53.291,-41.816,-56.023)
C2': (54.106,-42.193,-53.853)
C2: (56.985,-39.915,-51.154)
N1: (57.235,-38.621,-51.083)
N3: (56.452,-40.644,-52.111)
N6: (57.163,-36.574,-52.071)
N7: (55.943,-38.081,-54.455)
N9: (55.617,-40.285,-54.333)
O5': (53.633,-40.293,-57.836)
O3': (51.702,-42.258,-54.223)
Image (generated by PyMOL):
PyMOL image
show in jmol