Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A257:A229
Extra
PDB:
ATOM 1 O3' U A 256 80.582 107.980 -3.837 1.00 57.16 O
ATOM 2 P G A 257 79.274 107.613 -2.976 1.00 58.31 P
ATOM 3 OP1 G A 257 78.412 106.640 -3.702 1.00 59.32 O
ATOM 4 OP2 G A 257 78.694 108.904 -2.511 1.00 58.87 O
ATOM 5 O5' G A 257 79.890 106.811 -1.760 1.00 56.75 O
ATOM 6 C5' G A 257 80.693 105.650 -1.998 1.00 55.85 C
ATOM 7 C4' G A 257 81.399 105.280 -0.727 1.00 56.61 C
ATOM 8 O4' G A 257 82.395 106.285 -0.401 1.00 56.31 O
ATOM 9 C3' G A 257 80.448 105.312 0.451 1.00 56.41 C
ATOM 10 O3' G A 257 79.726 104.107 0.511 1.00 59.47 O
ATOM 11 C2' G A 257 81.367 105.573 1.630 1.00 54.52 C
ATOM 12 O2' G A 257 82.038 104.406 2.066 1.00 54.01 O
ATOM 13 C1' G A 257 82.353 106.557 0.995 1.00 53.76 C
ATOM 14 N9 G A 257 81.982 107.961 1.170 1.00 50.07 N
ATOM 15 C8 G A 257 80.930 108.640 0.596 1.00 48.02 C
ATOM 16 N7 G A 257 80.883 109.898 0.942 1.00 46.83 N
ATOM 17 C5 G A 257 81.964 110.058 1.794 1.00 45.58 C
ATOM 18 C6 G A 257 82.428 111.204 2.479 1.00 45.01 C
ATOM 19 O6 G A 257 81.962 112.356 2.468 1.00 43.05 O
ATOM 20 N1 G A 257 83.559 110.915 3.241 1.00 45.08 N
ATOM 21 C2 G A 257 84.165 109.687 3.330 1.00 46.22 C
ATOM 22 N2 G A 257 85.240 109.615 4.130 1.00 45.43 N
ATOM 23 N3 G A 257 83.745 108.614 2.691 1.00 46.59 N
ATOM 24 C4 G A 257 82.647 108.869 1.948 1.00 47.16 C
ATOM 25 P U A 258 78.244 104.120 1.096 1.00 60.57 P
ATOM 26 OP1 U A 258 77.593 102.909 0.522 1.00 60.43 O
ATOM 27 OP2 U A 258 77.629 105.464 0.873 1.00 60.02 O
ATOM 28 O5' U A 258 78.500 103.900 2.653 1.00 61.40 O
TER
ATOM 1 O3' C B 228 84.274 113.548 6.666 1.00 53.27 O
ATOM 2 P A B 229 85.624 113.264 5.851 1.00 51.91 P
ATOM 3 OP1 A B 229 86.329 114.577 5.763 1.00 50.75 O
ATOM 4 OP2 A B 229 85.242 112.565 4.609 1.00 53.08 O
ATOM 5 O5' A B 229 86.454 112.252 6.775 1.00 49.71 O
ATOM 6 C5' A B 229 86.994 112.676 8.047 1.00 48.46 C
ATOM 7 C4' A B 229 87.760 111.552 8.726 1.00 48.84 C
ATOM 8 O4' A B 229 86.864 110.557 9.282 1.00 48.36 O
ATOM 9 C3' A B 229 88.659 110.716 7.845 1.00 49.85 C
ATOM 10 O3' A B 229 89.844 111.400 7.508 1.00 51.85 O
ATOM 11 C2' A B 229 88.911 109.476 8.700 1.00 49.47 C
ATOM 12 O2' A B 229 89.913 109.617 9.685 1.00 50.50 O
ATOM 13 C1' A B 229 87.559 109.317 9.399 1.00 47.91 C
ATOM 14 N9 A B 229 86.729 108.237 8.862 1.00 46.24 N
ATOM 15 C8 A B 229 85.680 108.303 7.976 1.00 45.25 C
ATOM 16 N7 A B 229 85.159 107.138 7.689 1.00 44.49 N
ATOM 17 C5 A B 229 85.910 106.244 8.439 1.00 44.95 C
ATOM 18 C6 A B 229 85.862 104.843 8.569 1.00 44.51 C
ATOM 19 N6 A B 229 85.004 104.062 7.908 1.00 44.17 N
ATOM 20 N1 A B 229 86.743 104.266 9.405 1.00 44.54 N
ATOM 21 C2 A B 229 87.624 105.043 10.044 1.00 45.16 C
ATOM 22 N3 A B 229 87.780 106.363 9.994 1.00 44.84 N
ATOM 23 C4 A B 229 86.876 106.910 9.169 1.00 45.33 C
ATOM 24 P A B 230 90.276 111.461 5.973 1.00 54.28 P
ATOM 25 OP1 A B 230 91.538 112.252 5.890 1.00 53.72 O
ATOM 26 OP2 A B 230 89.072 111.918 5.210 1.00 52.87 O
ATOM 27 O5' A B 230 90.593 109.924 5.627 1.00 52.19 O
TER
ATOM 2 P G A 257 79.274 107.613 -2.976 1.00 58.31 P
ATOM 3 OP1 G A 257 78.412 106.640 -3.702 1.00 59.32 O
ATOM 4 OP2 G A 257 78.694 108.904 -2.511 1.00 58.87 O
ATOM 5 O5' G A 257 79.890 106.811 -1.760 1.00 56.75 O
ATOM 6 C5' G A 257 80.693 105.650 -1.998 1.00 55.85 C
ATOM 7 C4' G A 257 81.399 105.280 -0.727 1.00 56.61 C
ATOM 8 O4' G A 257 82.395 106.285 -0.401 1.00 56.31 O
ATOM 9 C3' G A 257 80.448 105.312 0.451 1.00 56.41 C
ATOM 10 O3' G A 257 79.726 104.107 0.511 1.00 59.47 O
ATOM 11 C2' G A 257 81.367 105.573 1.630 1.00 54.52 C
ATOM 12 O2' G A 257 82.038 104.406 2.066 1.00 54.01 O
ATOM 13 C1' G A 257 82.353 106.557 0.995 1.00 53.76 C
ATOM 14 N9 G A 257 81.982 107.961 1.170 1.00 50.07 N
ATOM 15 C8 G A 257 80.930 108.640 0.596 1.00 48.02 C
ATOM 16 N7 G A 257 80.883 109.898 0.942 1.00 46.83 N
ATOM 17 C5 G A 257 81.964 110.058 1.794 1.00 45.58 C
ATOM 18 C6 G A 257 82.428 111.204 2.479 1.00 45.01 C
ATOM 19 O6 G A 257 81.962 112.356 2.468 1.00 43.05 O
ATOM 20 N1 G A 257 83.559 110.915 3.241 1.00 45.08 N
ATOM 21 C2 G A 257 84.165 109.687 3.330 1.00 46.22 C
ATOM 22 N2 G A 257 85.240 109.615 4.130 1.00 45.43 N
ATOM 23 N3 G A 257 83.745 108.614 2.691 1.00 46.59 N
ATOM 24 C4 G A 257 82.647 108.869 1.948 1.00 47.16 C
ATOM 25 P U A 258 78.244 104.120 1.096 1.00 60.57 P
ATOM 26 OP1 U A 258 77.593 102.909 0.522 1.00 60.43 O
ATOM 27 OP2 U A 258 77.629 105.464 0.873 1.00 60.02 O
ATOM 28 O5' U A 258 78.500 103.900 2.653 1.00 61.40 O
TER
ATOM 1 O3' C B 228 84.274 113.548 6.666 1.00 53.27 O
ATOM 2 P A B 229 85.624 113.264 5.851 1.00 51.91 P
ATOM 3 OP1 A B 229 86.329 114.577 5.763 1.00 50.75 O
ATOM 4 OP2 A B 229 85.242 112.565 4.609 1.00 53.08 O
ATOM 5 O5' A B 229 86.454 112.252 6.775 1.00 49.71 O
ATOM 6 C5' A B 229 86.994 112.676 8.047 1.00 48.46 C
ATOM 7 C4' A B 229 87.760 111.552 8.726 1.00 48.84 C
ATOM 8 O4' A B 229 86.864 110.557 9.282 1.00 48.36 O
ATOM 9 C3' A B 229 88.659 110.716 7.845 1.00 49.85 C
ATOM 10 O3' A B 229 89.844 111.400 7.508 1.00 51.85 O
ATOM 11 C2' A B 229 88.911 109.476 8.700 1.00 49.47 C
ATOM 12 O2' A B 229 89.913 109.617 9.685 1.00 50.50 O
ATOM 13 C1' A B 229 87.559 109.317 9.399 1.00 47.91 C
ATOM 14 N9 A B 229 86.729 108.237 8.862 1.00 46.24 N
ATOM 15 C8 A B 229 85.680 108.303 7.976 1.00 45.25 C
ATOM 16 N7 A B 229 85.159 107.138 7.689 1.00 44.49 N
ATOM 17 C5 A B 229 85.910 106.244 8.439 1.00 44.95 C
ATOM 18 C6 A B 229 85.862 104.843 8.569 1.00 44.51 C
ATOM 19 N6 A B 229 85.004 104.062 7.908 1.00 44.17 N
ATOM 20 N1 A B 229 86.743 104.266 9.405 1.00 44.54 N
ATOM 21 C2 A B 229 87.624 105.043 10.044 1.00 45.16 C
ATOM 22 N3 A B 229 87.780 106.363 9.994 1.00 44.84 N
ATOM 23 C4 A B 229 86.876 106.910 9.169 1.00 45.33 C
ATOM 24 P A B 230 90.276 111.461 5.973 1.00 54.28 P
ATOM 25 OP1 A B 230 91.538 112.252 5.890 1.00 53.72 O
ATOM 26 OP2 A B 230 89.072 111.918 5.210 1.00 52.87 O
ATOM 27 O5' A B 230 90.593 109.924 5.627 1.00 52.19 O
TER
Atoms:
OP1: (78.412,106.640,-3.702)
OP2: (78.694,108.904,-2.511)
C3': (80.448,105.312,0.451)
C1': (82.353,106.557,0.995)
C5': (80.693,105.650,-1.998)
O6: (81.962,112.356,2.468)
O4': (82.395,106.285,-0.401)
C8: (80.930,108.640,0.596)
C2: (84.165,109.687,3.330)
C6: (82.428,111.204,2.479)
C5: (81.964,110.058,1.794)
C4: (82.647,108.869,1.948)
P: (79.274,107.613,-2.976)
C4': (81.399,105.280,-0.727)
C2': (81.367,105.573,1.630)
O2': (82.038,104.406,2.066)
N1: (83.559,110.915,3.241)
N2: (85.240,109.615,4.130)
N3: (83.745,108.614,2.691)
N7: (80.883,109.898,0.942)
N9: (81.982,107.961,1.170)
O5': (79.890,106.811,-1.760)
O3': (79.726,104.107,0.511)
OP2: (78.694,108.904,-2.511)
C3': (80.448,105.312,0.451)
C1': (82.353,106.557,0.995)
C5': (80.693,105.650,-1.998)
O6: (81.962,112.356,2.468)
O4': (82.395,106.285,-0.401)
C8: (80.930,108.640,0.596)
C2: (84.165,109.687,3.330)
C6: (82.428,111.204,2.479)
C5: (81.964,110.058,1.794)
C4: (82.647,108.869,1.948)
P: (79.274,107.613,-2.976)
C4': (81.399,105.280,-0.727)
C2': (81.367,105.573,1.630)
O2': (82.038,104.406,2.066)
N1: (83.559,110.915,3.241)
N2: (85.240,109.615,4.130)
N3: (83.745,108.614,2.691)
N7: (80.883,109.898,0.942)
N9: (81.982,107.961,1.170)
O5': (79.890,106.811,-1.760)
O3': (79.726,104.107,0.511)
OP1: (86.329,114.577,5.763)
OP2: (85.242,112.565,4.609)
C3': (88.659,110.716,7.845)
C1': (87.559,109.317,9.399)
C5': (86.994,112.676,8.047)
O4': (86.864,110.557,9.282)
C8: (85.680,108.303,7.976)
O2': (89.913,109.617,9.685)
C6: (85.862,104.843,8.569)
C5: (85.910,106.244,8.439)
C4: (86.876,106.910,9.169)
P: (85.624,113.264,5.851)
C4': (87.760,111.552,8.726)
C2': (88.911,109.476,8.700)
C2: (87.624,105.043,10.044)
N1: (86.743,104.266,9.405)
N3: (87.780,106.363,9.994)
N6: (85.004,104.062,7.908)
N7: (85.159,107.138,7.689)
N9: (86.729,108.237,8.862)
O5': (86.454,112.252,6.775)
O3': (89.844,111.400,7.508)
OP2: (85.242,112.565,4.609)
C3': (88.659,110.716,7.845)
C1': (87.559,109.317,9.399)
C5': (86.994,112.676,8.047)
O4': (86.864,110.557,9.282)
C8: (85.680,108.303,7.976)
O2': (89.913,109.617,9.685)
C6: (85.862,104.843,8.569)
C5: (85.910,106.244,8.439)
C4: (86.876,106.910,9.169)
P: (85.624,113.264,5.851)
C4': (87.760,111.552,8.726)
C2': (88.911,109.476,8.700)
C2: (87.624,105.043,10.044)
N1: (86.743,104.266,9.405)
N3: (87.780,106.363,9.994)
N6: (85.004,104.062,7.908)
N7: (85.159,107.138,7.689)
N9: (86.729,108.237,8.862)
O5': (86.454,112.252,6.775)
O3': (89.844,111.400,7.508)
Image (generated by PyMOL):