ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8S:A1624:A1627

Extra

PDB:
ATOM 1 O3' A A1623 -16.387 -31.309 -16.225 1.00 0.01 O
ATOM 2 P G A1624 -16.825 -29.870 -15.713 1.00 0.01 P
ATOM 3 OP1 G A1624 -17.328 -29.127 -16.894 1.00 0.01 O
ATOM 4 OP2 G A1624 -15.690 -29.319 -14.952 1.00 0.01 O
ATOM 5 O5' G A1624 -18.023 -30.195 -14.726 1.00 0.01 O
ATOM 6 C5' G A1624 -19.350 -30.250 -15.207 1.00 0.01 C
ATOM 7 C4' G A1624 -20.337 -30.362 -14.093 1.00 0.01 C
ATOM 8 O4' G A1624 -19.992 -31.470 -13.240 1.00 0.01 O
ATOM 9 C3' G A1624 -20.395 -29.196 -13.154 1.00 0.01 C
ATOM 10 O3' G A1624 -21.100 -28.112 -13.698 1.00 0.01 O
ATOM 11 C2' G A1624 -21.052 -29.814 -11.922 1.00 0.01 C
ATOM 12 O2' G A1624 -22.462 -29.922 -12.086 1.00 0.01 O
ATOM 13 C1' G A1624 -20.455 -31.222 -11.934 1.00 0.01 C
ATOM 14 N9 G A1624 -19.329 -31.353 -10.993 1.00 0.01 N
ATOM 15 C8 G A1624 -18.017 -31.111 -11.294 1.00 0.01 C
ATOM 16 N7 G A1624 -17.208 -31.282 -10.283 1.00 0.01 N
ATOM 17 C5 G A1624 -18.054 -31.660 -9.264 1.00 0.01 C
ATOM 18 C6 G A1624 -17.730 -31.963 -7.942 1.00 0.01 C
ATOM 19 O6 G A1624 -16.600 -31.939 -7.459 1.00 0.01 O
ATOM 20 N1 G A1624 -18.839 -32.313 -7.185 1.00 0.01 N
ATOM 21 C2 G A1624 -20.118 -32.351 -7.656 1.00 0.01 C
ATOM 22 N2 G A1624 -21.075 -32.702 -6.778 1.00 0.01 N
ATOM 23 N3 G A1624 -20.424 -32.066 -8.904 1.00 0.01 N
ATOM 24 C4 G A1624 -19.358 -31.727 -9.660 1.00 0.01 C
ATOM 25 P A A1625 -20.680 -26.621 -13.336 1.00 0.01 P
ATOM 26 OP1 A A1625 -21.565 -25.728 -14.088 1.00 0.01 O
ATOM 27 OP2 A A1625 -19.230 -26.521 -13.532 1.00 0.01 O
ATOM 28 O5' A A1625 -21.007 -26.529 -11.807 1.00 0.01 O
TER

ATOM 1 O3' G B1626 -20.952 -30.643 -3.418 1.00 0.27 O
ATOM 2 P A B1627 -19.762 -31.674 -3.186 1.00 0.01 P
ATOM 3 OP1 A B1627 -18.652 -30.919 -2.554 1.00 0.01 O
ATOM 4 OP2 A B1627 -19.520 -32.388 -4.460 1.00 0.01 O
ATOM 5 O5' A B1627 -20.403 -32.648 -2.117 1.00 0.01 O
ATOM 6 C5' A B1627 -20.779 -33.960 -2.457 1.00 0.01 C
ATOM 7 C4' A B1627 -21.864 -34.468 -1.562 1.00 0.01 C
ATOM 8 O4' A B1627 -21.690 -33.933 -0.220 1.00 0.01 O
ATOM 9 C3' A B1627 -23.275 -34.094 -1.981 1.00 0.01 C
ATOM 10 O3' A B1627 -24.123 -35.186 -1.711 1.00 0.01 O
ATOM 11 C2' A B1627 -23.609 -32.947 -1.037 1.00 0.01 C
ATOM 12 O2' A B1627 -24.987 -32.723 -0.820 1.00 0.01 O
ATOM 13 C1' A B1627 -22.926 -33.430 0.215 1.00 0.01 C
ATOM 14 N9 A B1627 -22.715 -32.395 1.203 1.00 0.01 N
ATOM 15 C8 A B1627 -21.896 -31.324 1.178 1.00 0.01 C
ATOM 16 N7 A B1627 -22.010 -30.589 2.244 1.00 0.01 N
ATOM 17 C5 A B1627 -22.977 -31.210 2.991 1.00 0.01 C
ATOM 18 C6 A B1627 -23.534 -30.917 4.219 1.00 0.01 C
ATOM 19 N6 A B1627 -23.147 -29.849 4.909 1.00 0.01 N
ATOM 20 N1 A B1627 -24.491 -31.732 4.705 1.00 0.01 N
ATOM 21 C2 A B1627 -24.854 -32.784 3.992 1.00 0.01 C
ATOM 22 N3 A B1627 -24.393 -33.175 2.818 1.00 0.01 N
ATOM 23 C4 A B1627 -23.440 -32.325 2.363 1.00 0.01 C
ATOM 24 P A B1628 -24.234 -36.371 -2.751 1.00 0.01 P
ATOM 25 OP1 A B1628 -24.885 -37.494 -2.068 1.00 0.01 O
ATOM 26 OP2 A B1628 -22.911 -36.574 -3.322 1.00 0.01 O
ATOM 27 O5' A B1628 -25.199 -35.761 -3.837 1.00 0.01 O
TER

Atoms:
OP1: (-17.328,-29.127,-16.894)
OP2: (-15.690,-29.319,-14.952)
C3': (-20.395,-29.196,-13.154)
C1': (-20.455,-31.222,-11.934)
C5': (-19.350,-30.250,-15.207)
O6: (-16.600,-31.939,-7.459)
O4': (-19.992,-31.470,-13.240)
C8: (-18.017,-31.111,-11.294)
C2: (-20.118,-32.351,-7.656)
C6: (-17.730,-31.963,-7.942)
C5: (-18.054,-31.660,-9.264)
C4: (-19.358,-31.727,-9.660)
P: (-16.825,-29.870,-15.713)
C4': (-20.337,-30.362,-14.093)
C2': (-21.052,-29.814,-11.922)
O2': (-22.462,-29.922,-12.086)
N1: (-18.839,-32.313,-7.185)
N2: (-21.075,-32.702,-6.778)
N3: (-20.424,-32.066,-8.904)
N7: (-17.208,-31.282,-10.283)
N9: (-19.329,-31.353,-10.993)
O5': (-18.023,-30.195,-14.726)
O3': (-21.100,-28.112,-13.698)
OP1: (-18.652,-30.919,-2.554)
OP2: (-19.520,-32.388,-4.460)
C3': (-23.275,-34.094,-1.981)
C1': (-22.926,-33.430,0.215)
C5': (-20.779,-33.960,-2.457)
O4': (-21.690,-33.933,-0.220)
C8: (-21.896,-31.324,1.178)
O2': (-24.987,-32.723,-0.820)
C6: (-23.534,-30.917,4.219)
C5: (-22.977,-31.210,2.991)
C4: (-23.440,-32.325,2.363)
P: (-19.762,-31.674,-3.186)
C4': (-21.864,-34.468,-1.562)
C2': (-23.609,-32.947,-1.037)
C2: (-24.854,-32.784,3.992)
N1: (-24.491,-31.732,4.705)
N3: (-24.393,-33.175,2.818)
N6: (-23.147,-29.849,4.909)
N7: (-22.010,-30.589,2.244)
N9: (-22.715,-32.395,1.203)
O5': (-20.403,-32.648,-2.117)
O3': (-24.123,-35.186,-1.711)
Image (generated by PyMOL):
PyMOL image
show in jmol