Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX5:A17:A35
Extra
PDB:
ATOM 1 O3' U A 16 1.481 13.613 29.710 1.00 88.65 O
ATOM 2 P G A 17 1.142 13.217 31.225 1.00114.23 P
ATOM 3 OP1 G A 17 0.060 14.107 31.708 1.00117.00 O
ATOM 4 OP2 G A 17 2.415 13.133 31.982 1.00109.88 O
ATOM 5 O5' G A 17 0.517 11.756 31.017 1.00 99.35 O
ATOM 6 C5' G A 17 -0.568 11.616 30.102 1.00 99.14 C
ATOM 7 C4' G A 17 -0.602 10.251 29.436 1.00 97.19 C
ATOM 8 O4' G A 17 0.688 9.936 28.854 1.00 94.99 O
ATOM 9 C3' G A 17 -0.896 9.081 30.360 1.00 96.22 C
ATOM 10 O3' G A 17 -2.292 8.961 30.508 1.00 98.58 O
ATOM 11 C2' G A 17 -0.333 7.918 29.563 1.00 92.78 C
ATOM 12 O2' G A 17 -1.205 7.554 28.510 1.00 93.06 O
ATOM 13 C1' G A 17 0.939 8.549 29.002 1.00 90.69 C
ATOM 14 N9 G A 17 2.134 8.386 29.828 1.00 84.78 N
ATOM 15 C8 G A 17 2.723 9.334 30.633 1.00 83.93 C
ATOM 16 N7 G A 17 3.791 8.900 31.244 1.00 81.99 N
ATOM 17 C5 G A 17 3.926 7.585 30.812 1.00 78.44 C
ATOM 18 C6 G A 17 4.901 6.609 31.134 1.00 76.72 C
ATOM 19 O6 G A 17 5.877 6.703 31.890 1.00 77.31 O
ATOM 20 N1 G A 17 4.663 5.407 30.478 1.00 75.07 N
ATOM 21 C2 G A 17 3.617 5.175 29.618 1.00 74.29 C
ATOM 22 N2 G A 17 3.558 3.945 29.085 1.00 69.16 N
ATOM 23 N3 G A 17 2.696 6.081 29.307 1.00 76.57 N
ATOM 24 C4 G A 17 2.913 7.257 29.939 1.00 79.03 C
ATOM 25 P G A 18 -3.014 9.711 31.719 1.00109.52 P
ATOM 26 OP1 G A 18 -3.657 10.936 31.194 1.00112.00 O
ATOM 27 OP2 G A 18 -2.053 9.800 32.847 1.00105.54 O
ATOM 28 O5' G A 18 -4.169 8.674 32.092 1.00 99.99 O
TER
ATOM 1 O3' G B 34 6.940 1.712 32.895 1.00 60.65 O
ATOM 2 P A B 35 6.989 1.822 31.292 1.00 68.80 P
ATOM 3 OP1 A B 35 8.392 1.550 30.904 1.00 66.91 O
ATOM 4 OP2 A B 35 6.348 3.084 30.864 1.00 72.46 O
ATOM 5 O5' A B 35 6.075 0.613 30.790 1.00 55.74 O
ATOM 6 C5' A B 35 6.609 -0.705 30.772 1.00 52.60 C
ATOM 7 C4' A B 35 5.534 -1.698 30.399 1.00 55.90 C
ATOM 8 O4' A B 35 4.499 -1.656 31.408 1.00 61.95 O
ATOM 9 C3' A B 35 4.805 -1.394 29.102 1.00 59.88 C
ATOM 10 O3' A B 35 5.513 -1.950 27.994 1.00 61.80 O
ATOM 11 C2' A B 35 3.472 -2.089 29.343 1.00 61.77 C
ATOM 12 O2' A B 35 3.559 -3.485 29.173 1.00 62.39 O
ATOM 13 C1' A B 35 3.222 -1.764 30.810 1.00 65.89 C
ATOM 14 N9 A B 35 2.545 -0.487 30.976 1.00 71.34 N
ATOM 15 C8 A B 35 2.963 0.573 31.728 1.00 73.79 C
ATOM 16 N7 A B 35 2.150 1.600 31.674 1.00 77.67 N
ATOM 17 C5 A B 35 1.138 1.188 30.824 1.00 76.14 C
ATOM 18 C6 A B 35 -0.024 1.827 30.355 1.00 78.46 C
ATOM 19 N6 A B 35 -0.371 3.071 30.701 1.00 79.99 N
ATOM 20 N1 A B 35 -0.818 1.131 29.518 1.00 80.24 N
ATOM 21 C2 A B 35 -0.463 -0.114 29.177 1.00 78.34 C
ATOM 22 N3 A B 35 0.605 -0.815 29.550 1.00 73.96 N
ATOM 23 C4 A B 35 1.370 -0.097 30.382 1.00 72.95 C
ATOM 24 P A B 36 5.790 -1.030 26.716 1.00 67.73 P
ATOM 25 OP1 A B 36 6.559 -1.809 25.726 1.00 71.40 O
ATOM 26 OP2 A B 36 6.329 0.263 27.194 1.00 67.27 O
ATOM 27 O5' A B 36 4.315 -0.855 26.117 1.00 68.76 O
TER
ATOM 2 P G A 17 1.142 13.217 31.225 1.00114.23 P
ATOM 3 OP1 G A 17 0.060 14.107 31.708 1.00117.00 O
ATOM 4 OP2 G A 17 2.415 13.133 31.982 1.00109.88 O
ATOM 5 O5' G A 17 0.517 11.756 31.017 1.00 99.35 O
ATOM 6 C5' G A 17 -0.568 11.616 30.102 1.00 99.14 C
ATOM 7 C4' G A 17 -0.602 10.251 29.436 1.00 97.19 C
ATOM 8 O4' G A 17 0.688 9.936 28.854 1.00 94.99 O
ATOM 9 C3' G A 17 -0.896 9.081 30.360 1.00 96.22 C
ATOM 10 O3' G A 17 -2.292 8.961 30.508 1.00 98.58 O
ATOM 11 C2' G A 17 -0.333 7.918 29.563 1.00 92.78 C
ATOM 12 O2' G A 17 -1.205 7.554 28.510 1.00 93.06 O
ATOM 13 C1' G A 17 0.939 8.549 29.002 1.00 90.69 C
ATOM 14 N9 G A 17 2.134 8.386 29.828 1.00 84.78 N
ATOM 15 C8 G A 17 2.723 9.334 30.633 1.00 83.93 C
ATOM 16 N7 G A 17 3.791 8.900 31.244 1.00 81.99 N
ATOM 17 C5 G A 17 3.926 7.585 30.812 1.00 78.44 C
ATOM 18 C6 G A 17 4.901 6.609 31.134 1.00 76.72 C
ATOM 19 O6 G A 17 5.877 6.703 31.890 1.00 77.31 O
ATOM 20 N1 G A 17 4.663 5.407 30.478 1.00 75.07 N
ATOM 21 C2 G A 17 3.617 5.175 29.618 1.00 74.29 C
ATOM 22 N2 G A 17 3.558 3.945 29.085 1.00 69.16 N
ATOM 23 N3 G A 17 2.696 6.081 29.307 1.00 76.57 N
ATOM 24 C4 G A 17 2.913 7.257 29.939 1.00 79.03 C
ATOM 25 P G A 18 -3.014 9.711 31.719 1.00109.52 P
ATOM 26 OP1 G A 18 -3.657 10.936 31.194 1.00112.00 O
ATOM 27 OP2 G A 18 -2.053 9.800 32.847 1.00105.54 O
ATOM 28 O5' G A 18 -4.169 8.674 32.092 1.00 99.99 O
TER
ATOM 1 O3' G B 34 6.940 1.712 32.895 1.00 60.65 O
ATOM 2 P A B 35 6.989 1.822 31.292 1.00 68.80 P
ATOM 3 OP1 A B 35 8.392 1.550 30.904 1.00 66.91 O
ATOM 4 OP2 A B 35 6.348 3.084 30.864 1.00 72.46 O
ATOM 5 O5' A B 35 6.075 0.613 30.790 1.00 55.74 O
ATOM 6 C5' A B 35 6.609 -0.705 30.772 1.00 52.60 C
ATOM 7 C4' A B 35 5.534 -1.698 30.399 1.00 55.90 C
ATOM 8 O4' A B 35 4.499 -1.656 31.408 1.00 61.95 O
ATOM 9 C3' A B 35 4.805 -1.394 29.102 1.00 59.88 C
ATOM 10 O3' A B 35 5.513 -1.950 27.994 1.00 61.80 O
ATOM 11 C2' A B 35 3.472 -2.089 29.343 1.00 61.77 C
ATOM 12 O2' A B 35 3.559 -3.485 29.173 1.00 62.39 O
ATOM 13 C1' A B 35 3.222 -1.764 30.810 1.00 65.89 C
ATOM 14 N9 A B 35 2.545 -0.487 30.976 1.00 71.34 N
ATOM 15 C8 A B 35 2.963 0.573 31.728 1.00 73.79 C
ATOM 16 N7 A B 35 2.150 1.600 31.674 1.00 77.67 N
ATOM 17 C5 A B 35 1.138 1.188 30.824 1.00 76.14 C
ATOM 18 C6 A B 35 -0.024 1.827 30.355 1.00 78.46 C
ATOM 19 N6 A B 35 -0.371 3.071 30.701 1.00 79.99 N
ATOM 20 N1 A B 35 -0.818 1.131 29.518 1.00 80.24 N
ATOM 21 C2 A B 35 -0.463 -0.114 29.177 1.00 78.34 C
ATOM 22 N3 A B 35 0.605 -0.815 29.550 1.00 73.96 N
ATOM 23 C4 A B 35 1.370 -0.097 30.382 1.00 72.95 C
ATOM 24 P A B 36 5.790 -1.030 26.716 1.00 67.73 P
ATOM 25 OP1 A B 36 6.559 -1.809 25.726 1.00 71.40 O
ATOM 26 OP2 A B 36 6.329 0.263 27.194 1.00 67.27 O
ATOM 27 O5' A B 36 4.315 -0.855 26.117 1.00 68.76 O
TER
Atoms:
OP1: (0.060,14.107,31.708)
OP2: (2.415,13.133,31.982)
C3': (-0.896,9.081,30.360)
C1': (0.939,8.549,29.002)
C5': (-0.568,11.616,30.102)
O6: (5.877,6.703,31.890)
O4': (0.688,9.936,28.854)
C8: (2.723,9.334,30.633)
C2: (3.617,5.175,29.618)
C6: (4.901,6.609,31.134)
C5: (3.926,7.585,30.812)
C4: (2.913,7.257,29.939)
P: (1.142,13.217,31.225)
C4': (-0.602,10.251,29.436)
C2': (-0.333,7.918,29.563)
O2': (-1.205,7.554,28.510)
N1: (4.663,5.407,30.478)
N2: (3.558,3.945,29.085)
N3: (2.696,6.081,29.307)
N7: (3.791,8.900,31.244)
N9: (2.134,8.386,29.828)
O5': (0.517,11.756,31.017)
O3': (-2.292,8.961,30.508)
OP2: (2.415,13.133,31.982)
C3': (-0.896,9.081,30.360)
C1': (0.939,8.549,29.002)
C5': (-0.568,11.616,30.102)
O6: (5.877,6.703,31.890)
O4': (0.688,9.936,28.854)
C8: (2.723,9.334,30.633)
C2: (3.617,5.175,29.618)
C6: (4.901,6.609,31.134)
C5: (3.926,7.585,30.812)
C4: (2.913,7.257,29.939)
P: (1.142,13.217,31.225)
C4': (-0.602,10.251,29.436)
C2': (-0.333,7.918,29.563)
O2': (-1.205,7.554,28.510)
N1: (4.663,5.407,30.478)
N2: (3.558,3.945,29.085)
N3: (2.696,6.081,29.307)
N7: (3.791,8.900,31.244)
N9: (2.134,8.386,29.828)
O5': (0.517,11.756,31.017)
O3': (-2.292,8.961,30.508)
OP1: (8.392,1.550,30.904)
OP2: (6.348,3.084,30.864)
C3': (4.805,-1.394,29.102)
C1': (3.222,-1.764,30.810)
C5': (6.609,-0.705,30.772)
O4': (4.499,-1.656,31.408)
C8: (2.963,0.573,31.728)
O2': (3.559,-3.485,29.173)
C6: (-0.024,1.827,30.355)
C5: (1.138,1.188,30.824)
C4: (1.370,-0.097,30.382)
P: (6.989,1.822,31.292)
C4': (5.534,-1.698,30.399)
C2': (3.472,-2.089,29.343)
C2: (-0.463,-0.114,29.177)
N1: (-0.818,1.131,29.518)
N3: (0.605,-0.815,29.550)
N6: (-0.371,3.071,30.701)
N7: (2.150,1.600,31.674)
N9: (2.545,-0.487,30.976)
O5': (6.075,0.613,30.790)
O3': (5.513,-1.950,27.994)
OP2: (6.348,3.084,30.864)
C3': (4.805,-1.394,29.102)
C1': (3.222,-1.764,30.810)
C5': (6.609,-0.705,30.772)
O4': (4.499,-1.656,31.408)
C8: (2.963,0.573,31.728)
O2': (3.559,-3.485,29.173)
C6: (-0.024,1.827,30.355)
C5: (1.138,1.188,30.824)
C4: (1.370,-0.097,30.382)
P: (6.989,1.822,31.292)
C4': (5.534,-1.698,30.399)
C2': (3.472,-2.089,29.343)
C2: (-0.463,-0.114,29.177)
N1: (-0.818,1.131,29.518)
N3: (0.605,-0.815,29.550)
N6: (-0.371,3.071,30.701)
N7: (2.150,1.600,31.674)
N9: (2.545,-0.487,30.976)
O5': (6.075,0.613,30.790)
O3': (5.513,-1.950,27.994)
Image (generated by PyMOL):