Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J02:A418:A404
Extra
PDB:
ATOM 1 O3' U A 417 -113.234 36.024 -66.824 1.00 7.98 O
ATOM 2 P G A 418 -112.663 36.040 -68.323 1.00 42.48 P
ATOM 3 OP1 G A 418 -113.193 34.820 -69.008 1.00 35.39 O
ATOM 4 OP2 G A 418 -111.195 36.290 -68.297 1.00 35.85 O
ATOM 5 O5' G A 418 -113.358 37.318 -68.959 1.00 48.89 O
ATOM 6 C5' G A 418 -112.679 38.095 -69.946 1.00 49.68 C
ATOM 7 C4' G A 418 -113.504 39.298 -70.310 1.00 50.34 C
ATOM 8 O4' G A 418 -114.689 38.878 -71.043 1.00 50.44 O
ATOM 9 C3' G A 418 -113.983 40.137 -69.136 1.00 50.25 C
ATOM 10 O3' G A 418 -113.460 41.484 -69.144 1.00 49.95 O
ATOM 11 C2' G A 418 -115.473 39.811 -69.004 1.00 50.00 C
ATOM 12 O2' G A 418 -116.280 40.849 -68.478 1.00 49.60 O
ATOM 13 C1' G A 418 -115.861 39.376 -70.422 1.00 50.46 C
ATOM 14 N9 G A 418 -116.827 38.279 -70.396 1.00 39.51 N
ATOM 15 C8 G A 418 -116.541 36.959 -70.145 1.00 39.68 C
ATOM 16 N7 G A 418 -117.598 36.195 -70.143 1.00 40.01 N
ATOM 17 C5 G A 418 -118.651 37.057 -70.415 1.00 40.50 C
ATOM 18 C6 G A 418 -120.047 36.800 -70.524 1.00 40.44 C
ATOM 19 O6 G A 418 -120.647 35.731 -70.374 1.00 40.25 O
ATOM 20 N1 G A 418 -120.761 37.952 -70.827 1.00 40.95 N
ATOM 21 C2 G A 418 -120.216 39.192 -70.990 1.00 41.66 C
ATOM 22 N2 G A 418 -121.086 40.173 -71.280 1.00 42.45 N
ATOM 23 N3 G A 418 -118.915 39.455 -70.878 1.00 41.33 N
ATOM 24 C4 G A 418 -118.196 38.346 -70.592 1.00 40.46 C
ATOM 25 P U A 419 -113.975 42.593 -70.201 1.00 33.69 P
ATOM 26 OP1 U A 419 -112.939 43.644 -70.120 1.00 36.67 O
ATOM 27 OP2 U A 419 -115.386 42.949 -69.937 1.00 37.09 O
ATOM 28 O5' U A 419 -113.848 41.901 -71.630 1.00 26.44 O
TER
ATOM 1 O3' G B 403 -124.082 40.932 -72.555 1.00 78.87 O
ATOM 2 P A B 404 -124.723 39.830 -71.582 1.00 56.01 P
ATOM 3 OP1 A B 404 -125.482 40.514 -70.499 1.00 77.11 O
ATOM 4 OP2 A B 404 -123.636 38.879 -71.231 1.00 77.75 O
ATOM 5 O5' A B 404 -125.767 39.075 -72.514 1.00 40.80 O
ATOM 6 C5' A B 404 -125.352 38.587 -73.788 1.00 40.63 C
ATOM 7 C4' A B 404 -126.375 37.646 -74.367 1.00 40.30 C
ATOM 8 O4' A B 404 -125.773 37.102 -75.570 1.00 41.03 O
ATOM 9 C3' A B 404 -126.727 36.450 -73.487 1.00 40.51 C
ATOM 10 O3' A B 404 -127.962 36.675 -72.796 1.00 40.29 O
ATOM 11 C2' A B 404 -126.844 35.308 -74.490 1.00 41.09 C
ATOM 12 O2' A B 404 -128.104 35.288 -75.125 1.00 41.08 O
ATOM 13 C1' A B 404 -125.780 35.693 -75.516 1.00 41.94 C
ATOM 14 N9 A B 404 -124.430 35.269 -75.142 1.00 59.46 N
ATOM 15 C8 A B 404 -123.429 36.033 -74.585 1.00 59.79 C
ATOM 16 N7 A B 404 -122.321 35.374 -74.367 1.00 60.36 N
ATOM 17 C5 A B 404 -122.609 34.091 -74.806 1.00 60.13 C
ATOM 18 C6 A B 404 -121.843 32.920 -74.853 1.00 59.94 C
ATOM 19 N6 A B 404 -120.581 32.843 -74.432 1.00 59.95 N
ATOM 20 N1 A B 404 -122.425 31.811 -75.357 1.00 59.72 N
ATOM 21 C2 A B 404 -123.695 31.888 -75.782 1.00 59.83 C
ATOM 22 N3 A B 404 -124.519 32.933 -75.790 1.00 59.40 N
ATOM 23 C4 A B 404 -123.906 34.014 -75.284 1.00 59.69 C
ATOM 24 P A B 405 -128.231 35.971 -71.369 1.00109.49 P
ATOM 25 OP1 A B 405 -129.671 36.142 -71.045 1.00107.92 O
ATOM 26 OP2 A B 405 -127.201 36.454 -70.412 1.00108.73 O
ATOM 27 O5' A B 405 -127.977 34.418 -71.622 1.00 33.45 O
TER
ATOM 2 P G A 418 -112.663 36.040 -68.323 1.00 42.48 P
ATOM 3 OP1 G A 418 -113.193 34.820 -69.008 1.00 35.39 O
ATOM 4 OP2 G A 418 -111.195 36.290 -68.297 1.00 35.85 O
ATOM 5 O5' G A 418 -113.358 37.318 -68.959 1.00 48.89 O
ATOM 6 C5' G A 418 -112.679 38.095 -69.946 1.00 49.68 C
ATOM 7 C4' G A 418 -113.504 39.298 -70.310 1.00 50.34 C
ATOM 8 O4' G A 418 -114.689 38.878 -71.043 1.00 50.44 O
ATOM 9 C3' G A 418 -113.983 40.137 -69.136 1.00 50.25 C
ATOM 10 O3' G A 418 -113.460 41.484 -69.144 1.00 49.95 O
ATOM 11 C2' G A 418 -115.473 39.811 -69.004 1.00 50.00 C
ATOM 12 O2' G A 418 -116.280 40.849 -68.478 1.00 49.60 O
ATOM 13 C1' G A 418 -115.861 39.376 -70.422 1.00 50.46 C
ATOM 14 N9 G A 418 -116.827 38.279 -70.396 1.00 39.51 N
ATOM 15 C8 G A 418 -116.541 36.959 -70.145 1.00 39.68 C
ATOM 16 N7 G A 418 -117.598 36.195 -70.143 1.00 40.01 N
ATOM 17 C5 G A 418 -118.651 37.057 -70.415 1.00 40.50 C
ATOM 18 C6 G A 418 -120.047 36.800 -70.524 1.00 40.44 C
ATOM 19 O6 G A 418 -120.647 35.731 -70.374 1.00 40.25 O
ATOM 20 N1 G A 418 -120.761 37.952 -70.827 1.00 40.95 N
ATOM 21 C2 G A 418 -120.216 39.192 -70.990 1.00 41.66 C
ATOM 22 N2 G A 418 -121.086 40.173 -71.280 1.00 42.45 N
ATOM 23 N3 G A 418 -118.915 39.455 -70.878 1.00 41.33 N
ATOM 24 C4 G A 418 -118.196 38.346 -70.592 1.00 40.46 C
ATOM 25 P U A 419 -113.975 42.593 -70.201 1.00 33.69 P
ATOM 26 OP1 U A 419 -112.939 43.644 -70.120 1.00 36.67 O
ATOM 27 OP2 U A 419 -115.386 42.949 -69.937 1.00 37.09 O
ATOM 28 O5' U A 419 -113.848 41.901 -71.630 1.00 26.44 O
TER
ATOM 1 O3' G B 403 -124.082 40.932 -72.555 1.00 78.87 O
ATOM 2 P A B 404 -124.723 39.830 -71.582 1.00 56.01 P
ATOM 3 OP1 A B 404 -125.482 40.514 -70.499 1.00 77.11 O
ATOM 4 OP2 A B 404 -123.636 38.879 -71.231 1.00 77.75 O
ATOM 5 O5' A B 404 -125.767 39.075 -72.514 1.00 40.80 O
ATOM 6 C5' A B 404 -125.352 38.587 -73.788 1.00 40.63 C
ATOM 7 C4' A B 404 -126.375 37.646 -74.367 1.00 40.30 C
ATOM 8 O4' A B 404 -125.773 37.102 -75.570 1.00 41.03 O
ATOM 9 C3' A B 404 -126.727 36.450 -73.487 1.00 40.51 C
ATOM 10 O3' A B 404 -127.962 36.675 -72.796 1.00 40.29 O
ATOM 11 C2' A B 404 -126.844 35.308 -74.490 1.00 41.09 C
ATOM 12 O2' A B 404 -128.104 35.288 -75.125 1.00 41.08 O
ATOM 13 C1' A B 404 -125.780 35.693 -75.516 1.00 41.94 C
ATOM 14 N9 A B 404 -124.430 35.269 -75.142 1.00 59.46 N
ATOM 15 C8 A B 404 -123.429 36.033 -74.585 1.00 59.79 C
ATOM 16 N7 A B 404 -122.321 35.374 -74.367 1.00 60.36 N
ATOM 17 C5 A B 404 -122.609 34.091 -74.806 1.00 60.13 C
ATOM 18 C6 A B 404 -121.843 32.920 -74.853 1.00 59.94 C
ATOM 19 N6 A B 404 -120.581 32.843 -74.432 1.00 59.95 N
ATOM 20 N1 A B 404 -122.425 31.811 -75.357 1.00 59.72 N
ATOM 21 C2 A B 404 -123.695 31.888 -75.782 1.00 59.83 C
ATOM 22 N3 A B 404 -124.519 32.933 -75.790 1.00 59.40 N
ATOM 23 C4 A B 404 -123.906 34.014 -75.284 1.00 59.69 C
ATOM 24 P A B 405 -128.231 35.971 -71.369 1.00109.49 P
ATOM 25 OP1 A B 405 -129.671 36.142 -71.045 1.00107.92 O
ATOM 26 OP2 A B 405 -127.201 36.454 -70.412 1.00108.73 O
ATOM 27 O5' A B 405 -127.977 34.418 -71.622 1.00 33.45 O
TER
Atoms:
OP1: (-113.193,34.820,-69.008)
OP2: (-111.195,36.290,-68.297)
C3': (-113.983,40.137,-69.136)
C1': (-115.861,39.376,-70.422)
C5': (-112.679,38.095,-69.946)
O6: (-120.647,35.731,-70.374)
O4': (-114.689,38.878,-71.043)
C8: (-116.541,36.959,-70.145)
C2: (-120.216,39.192,-70.990)
C6: (-120.047,36.800,-70.524)
C5: (-118.651,37.057,-70.415)
C4: (-118.196,38.346,-70.592)
P: (-112.663,36.040,-68.323)
C4': (-113.504,39.298,-70.310)
C2': (-115.473,39.811,-69.004)
O2': (-116.280,40.849,-68.478)
N1: (-120.761,37.952,-70.827)
N2: (-121.086,40.173,-71.280)
N3: (-118.915,39.455,-70.878)
N7: (-117.598,36.195,-70.143)
N9: (-116.827,38.279,-70.396)
O5': (-113.358,37.318,-68.959)
O3': (-113.460,41.484,-69.144)
OP2: (-111.195,36.290,-68.297)
C3': (-113.983,40.137,-69.136)
C1': (-115.861,39.376,-70.422)
C5': (-112.679,38.095,-69.946)
O6: (-120.647,35.731,-70.374)
O4': (-114.689,38.878,-71.043)
C8: (-116.541,36.959,-70.145)
C2: (-120.216,39.192,-70.990)
C6: (-120.047,36.800,-70.524)
C5: (-118.651,37.057,-70.415)
C4: (-118.196,38.346,-70.592)
P: (-112.663,36.040,-68.323)
C4': (-113.504,39.298,-70.310)
C2': (-115.473,39.811,-69.004)
O2': (-116.280,40.849,-68.478)
N1: (-120.761,37.952,-70.827)
N2: (-121.086,40.173,-71.280)
N3: (-118.915,39.455,-70.878)
N7: (-117.598,36.195,-70.143)
N9: (-116.827,38.279,-70.396)
O5': (-113.358,37.318,-68.959)
O3': (-113.460,41.484,-69.144)
OP1: (-125.482,40.514,-70.499)
OP2: (-123.636,38.879,-71.231)
C3': (-126.727,36.450,-73.487)
C1': (-125.780,35.693,-75.516)
C5': (-125.352,38.587,-73.788)
O4': (-125.773,37.102,-75.570)
C8: (-123.429,36.033,-74.585)
O2': (-128.104,35.288,-75.125)
C6: (-121.843,32.920,-74.853)
C5: (-122.609,34.091,-74.806)
C4: (-123.906,34.014,-75.284)
P: (-124.723,39.830,-71.582)
C4': (-126.375,37.646,-74.367)
C2': (-126.844,35.308,-74.490)
C2: (-123.695,31.888,-75.782)
N1: (-122.425,31.811,-75.357)
N3: (-124.519,32.933,-75.790)
N6: (-120.581,32.843,-74.432)
N7: (-122.321,35.374,-74.367)
N9: (-124.430,35.269,-75.142)
O5': (-125.767,39.075,-72.514)
O3': (-127.962,36.675,-72.796)
OP2: (-123.636,38.879,-71.231)
C3': (-126.727,36.450,-73.487)
C1': (-125.780,35.693,-75.516)
C5': (-125.352,38.587,-73.788)
O4': (-125.773,37.102,-75.570)
C8: (-123.429,36.033,-74.585)
O2': (-128.104,35.288,-75.125)
C6: (-121.843,32.920,-74.853)
C5: (-122.609,34.091,-74.806)
C4: (-123.906,34.014,-75.284)
P: (-124.723,39.830,-71.582)
C4': (-126.375,37.646,-74.367)
C2': (-126.844,35.308,-74.490)
C2: (-123.695,31.888,-75.782)
N1: (-122.425,31.811,-75.357)
N3: (-124.519,32.933,-75.790)
N6: (-120.581,32.843,-74.432)
N7: (-122.321,35.374,-74.367)
N9: (-124.430,35.269,-75.142)
O5': (-125.767,39.075,-72.514)
O3': (-127.962,36.675,-72.796)
Image (generated by PyMOL):