Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1062:A1189
Extra
PDB:
ATOM 1 O3' C A1061 -116.884 41.306 -5.015 1.00 17.34 O
ATOM 2 P G A1062 -116.721 42.831 -4.551 1.00 14.51 P
ATOM 3 OP1 G A1062 -116.095 43.575 -5.697 1.00 14.51 O
ATOM 4 OP2 G A1062 -116.023 42.827 -3.208 1.00 14.51 O
ATOM 5 O5' G A1062 -118.221 43.297 -4.364 1.00 14.51 O
ATOM 6 C5' G A1062 -118.506 44.589 -3.861 1.00 14.51 C
ATOM 7 C4' G A1062 -119.629 45.200 -4.612 1.00 14.51 C
ATOM 8 O4' G A1062 -119.135 45.660 -5.897 1.00 14.51 O
ATOM 9 C3' G A1062 -120.762 44.241 -4.917 1.00 14.51 C
ATOM 10 O3' G A1062 -121.998 44.951 -4.873 1.00 14.51 O
ATOM 11 C2' G A1062 -120.447 43.810 -6.348 1.00 14.51 C
ATOM 12 O2' G A1062 -121.550 43.330 -7.083 1.00 14.51 O
ATOM 13 C1' G A1062 -119.916 45.103 -6.920 1.00 14.51 C
ATOM 14 N9 G A1062 -119.085 44.957 -8.116 1.00 14.40 N
ATOM 15 C8 G A1062 -117.801 44.504 -8.246 1.00 14.40 C
ATOM 16 N7 G A1062 -117.387 44.547 -9.487 1.00 14.40 N
ATOM 17 C5 G A1062 -118.443 45.066 -10.215 1.00 14.40 C
ATOM 18 C6 G A1062 -118.599 45.364 -11.600 1.00 14.40 C
ATOM 19 O6 G A1062 -117.822 45.229 -12.539 1.00 14.40 O
ATOM 20 N1 G A1062 -119.835 45.885 -11.908 1.00 14.40 N
ATOM 21 C2 G A1062 -120.816 46.093 -10.981 1.00 14.40 C
ATOM 22 N2 G A1062 -121.946 46.618 -11.477 1.00 14.40 N
ATOM 23 N3 G A1062 -120.703 45.827 -9.679 1.00 14.40 N
ATOM 24 C4 G A1062 -119.493 45.325 -9.377 1.00 14.40 C
ATOM 25 P U A1063 -122.983 44.801 -3.611 1.00 46.41 P
ATOM 26 OP1 U A1063 -122.145 44.488 -2.423 1.00 46.41 O
ATOM 27 OP2 U A1063 -124.048 43.856 -4.009 1.00 46.41 O
ATOM 28 O5' U A1063 -123.594 46.255 -3.464 1.00 46.41 O
TER
ATOM 1 O3' G B1188 -123.108 48.982 -13.740 1.00 32.58 O
ATOM 2 P A B1189 -122.209 48.522 -14.980 1.00 19.41 P
ATOM 3 OP1 A B1189 -123.134 48.175 -16.095 1.00 19.41 O
ATOM 4 OP2 A B1189 -121.272 47.476 -14.477 1.00 19.41 O
ATOM 5 O5' A B1189 -121.397 49.857 -15.328 1.00 19.41 O
ATOM 6 C5' A B1189 -121.674 50.607 -16.510 1.00 19.41 C
ATOM 7 C4' A B1189 -120.506 51.478 -16.882 1.00 19.41 C
ATOM 8 O4' A B1189 -119.932 52.020 -15.675 1.00 19.41 O
ATOM 9 C3' A B1189 -119.367 50.768 -17.593 1.00 19.41 C
ATOM 10 O3' A B1189 -119.483 50.870 -18.991 1.00 19.41 O
ATOM 11 C2' A B1189 -118.112 51.433 -17.052 1.00 19.41 C
ATOM 12 O2' A B1189 -117.778 52.580 -17.815 1.00 19.41 O
ATOM 13 C1' A B1189 -118.548 51.890 -15.679 1.00 19.41 C
ATOM 14 N9 A B1189 -118.186 50.954 -14.615 1.00 19.52 N
ATOM 15 C8 A B1189 -119.086 50.522 -13.684 1.00 19.52 C
ATOM 16 N7 A B1189 -118.572 49.747 -12.771 1.00 19.52 N
ATOM 17 C5 A B1189 -117.240 49.692 -13.118 1.00 19.52 C
ATOM 18 C6 A B1189 -116.173 49.023 -12.517 1.00 19.52 C
ATOM 19 N6 A B1189 -116.322 48.283 -11.407 1.00 19.52 N
ATOM 20 N1 A B1189 -114.957 49.155 -13.098 1.00 19.52 N
ATOM 21 C2 A B1189 -114.843 49.908 -14.198 1.00 19.52 C
ATOM 22 N3 A B1189 -115.784 50.589 -14.844 1.00 19.52 N
ATOM 23 C4 A B1189 -116.974 50.443 -14.245 1.00 19.52 C
ATOM 24 P C B1190 -119.529 49.556 -19.898 1.00 22.54 P
ATOM 25 OP1 C B1190 -120.404 49.848 -21.059 1.00 22.54 O
ATOM 26 OP2 C B1190 -119.890 48.428 -18.996 1.00 22.54 O
ATOM 27 O5' C B1190 -118.023 49.396 -20.397 1.00 22.54 O
TER
ATOM 2 P G A1062 -116.721 42.831 -4.551 1.00 14.51 P
ATOM 3 OP1 G A1062 -116.095 43.575 -5.697 1.00 14.51 O
ATOM 4 OP2 G A1062 -116.023 42.827 -3.208 1.00 14.51 O
ATOM 5 O5' G A1062 -118.221 43.297 -4.364 1.00 14.51 O
ATOM 6 C5' G A1062 -118.506 44.589 -3.861 1.00 14.51 C
ATOM 7 C4' G A1062 -119.629 45.200 -4.612 1.00 14.51 C
ATOM 8 O4' G A1062 -119.135 45.660 -5.897 1.00 14.51 O
ATOM 9 C3' G A1062 -120.762 44.241 -4.917 1.00 14.51 C
ATOM 10 O3' G A1062 -121.998 44.951 -4.873 1.00 14.51 O
ATOM 11 C2' G A1062 -120.447 43.810 -6.348 1.00 14.51 C
ATOM 12 O2' G A1062 -121.550 43.330 -7.083 1.00 14.51 O
ATOM 13 C1' G A1062 -119.916 45.103 -6.920 1.00 14.51 C
ATOM 14 N9 G A1062 -119.085 44.957 -8.116 1.00 14.40 N
ATOM 15 C8 G A1062 -117.801 44.504 -8.246 1.00 14.40 C
ATOM 16 N7 G A1062 -117.387 44.547 -9.487 1.00 14.40 N
ATOM 17 C5 G A1062 -118.443 45.066 -10.215 1.00 14.40 C
ATOM 18 C6 G A1062 -118.599 45.364 -11.600 1.00 14.40 C
ATOM 19 O6 G A1062 -117.822 45.229 -12.539 1.00 14.40 O
ATOM 20 N1 G A1062 -119.835 45.885 -11.908 1.00 14.40 N
ATOM 21 C2 G A1062 -120.816 46.093 -10.981 1.00 14.40 C
ATOM 22 N2 G A1062 -121.946 46.618 -11.477 1.00 14.40 N
ATOM 23 N3 G A1062 -120.703 45.827 -9.679 1.00 14.40 N
ATOM 24 C4 G A1062 -119.493 45.325 -9.377 1.00 14.40 C
ATOM 25 P U A1063 -122.983 44.801 -3.611 1.00 46.41 P
ATOM 26 OP1 U A1063 -122.145 44.488 -2.423 1.00 46.41 O
ATOM 27 OP2 U A1063 -124.048 43.856 -4.009 1.00 46.41 O
ATOM 28 O5' U A1063 -123.594 46.255 -3.464 1.00 46.41 O
TER
ATOM 1 O3' G B1188 -123.108 48.982 -13.740 1.00 32.58 O
ATOM 2 P A B1189 -122.209 48.522 -14.980 1.00 19.41 P
ATOM 3 OP1 A B1189 -123.134 48.175 -16.095 1.00 19.41 O
ATOM 4 OP2 A B1189 -121.272 47.476 -14.477 1.00 19.41 O
ATOM 5 O5' A B1189 -121.397 49.857 -15.328 1.00 19.41 O
ATOM 6 C5' A B1189 -121.674 50.607 -16.510 1.00 19.41 C
ATOM 7 C4' A B1189 -120.506 51.478 -16.882 1.00 19.41 C
ATOM 8 O4' A B1189 -119.932 52.020 -15.675 1.00 19.41 O
ATOM 9 C3' A B1189 -119.367 50.768 -17.593 1.00 19.41 C
ATOM 10 O3' A B1189 -119.483 50.870 -18.991 1.00 19.41 O
ATOM 11 C2' A B1189 -118.112 51.433 -17.052 1.00 19.41 C
ATOM 12 O2' A B1189 -117.778 52.580 -17.815 1.00 19.41 O
ATOM 13 C1' A B1189 -118.548 51.890 -15.679 1.00 19.41 C
ATOM 14 N9 A B1189 -118.186 50.954 -14.615 1.00 19.52 N
ATOM 15 C8 A B1189 -119.086 50.522 -13.684 1.00 19.52 C
ATOM 16 N7 A B1189 -118.572 49.747 -12.771 1.00 19.52 N
ATOM 17 C5 A B1189 -117.240 49.692 -13.118 1.00 19.52 C
ATOM 18 C6 A B1189 -116.173 49.023 -12.517 1.00 19.52 C
ATOM 19 N6 A B1189 -116.322 48.283 -11.407 1.00 19.52 N
ATOM 20 N1 A B1189 -114.957 49.155 -13.098 1.00 19.52 N
ATOM 21 C2 A B1189 -114.843 49.908 -14.198 1.00 19.52 C
ATOM 22 N3 A B1189 -115.784 50.589 -14.844 1.00 19.52 N
ATOM 23 C4 A B1189 -116.974 50.443 -14.245 1.00 19.52 C
ATOM 24 P C B1190 -119.529 49.556 -19.898 1.00 22.54 P
ATOM 25 OP1 C B1190 -120.404 49.848 -21.059 1.00 22.54 O
ATOM 26 OP2 C B1190 -119.890 48.428 -18.996 1.00 22.54 O
ATOM 27 O5' C B1190 -118.023 49.396 -20.397 1.00 22.54 O
TER
Atoms:
OP1: (-116.095,43.575,-5.697)
OP2: (-116.023,42.827,-3.208)
C3': (-120.762,44.241,-4.917)
C1': (-119.916,45.103,-6.920)
C5': (-118.506,44.589,-3.861)
O6: (-117.822,45.229,-12.539)
O4': (-119.135,45.660,-5.897)
C8: (-117.801,44.504,-8.246)
C2: (-120.816,46.093,-10.981)
C6: (-118.599,45.364,-11.600)
C5: (-118.443,45.066,-10.215)
C4: (-119.493,45.325,-9.377)
P: (-116.721,42.831,-4.551)
C4': (-119.629,45.200,-4.612)
C2': (-120.447,43.810,-6.348)
O2': (-121.550,43.330,-7.083)
N1: (-119.835,45.885,-11.908)
N2: (-121.946,46.618,-11.477)
N3: (-120.703,45.827,-9.679)
N7: (-117.387,44.547,-9.487)
N9: (-119.085,44.957,-8.116)
O5': (-118.221,43.297,-4.364)
O3': (-121.998,44.951,-4.873)
OP2: (-116.023,42.827,-3.208)
C3': (-120.762,44.241,-4.917)
C1': (-119.916,45.103,-6.920)
C5': (-118.506,44.589,-3.861)
O6: (-117.822,45.229,-12.539)
O4': (-119.135,45.660,-5.897)
C8: (-117.801,44.504,-8.246)
C2: (-120.816,46.093,-10.981)
C6: (-118.599,45.364,-11.600)
C5: (-118.443,45.066,-10.215)
C4: (-119.493,45.325,-9.377)
P: (-116.721,42.831,-4.551)
C4': (-119.629,45.200,-4.612)
C2': (-120.447,43.810,-6.348)
O2': (-121.550,43.330,-7.083)
N1: (-119.835,45.885,-11.908)
N2: (-121.946,46.618,-11.477)
N3: (-120.703,45.827,-9.679)
N7: (-117.387,44.547,-9.487)
N9: (-119.085,44.957,-8.116)
O5': (-118.221,43.297,-4.364)
O3': (-121.998,44.951,-4.873)
OP1: (-123.134,48.175,-16.095)
OP2: (-121.272,47.476,-14.477)
C3': (-119.367,50.768,-17.593)
C1': (-118.548,51.890,-15.679)
C5': (-121.674,50.607,-16.510)
O4': (-119.932,52.020,-15.675)
C8: (-119.086,50.522,-13.684)
O2': (-117.778,52.580,-17.815)
C6: (-116.173,49.023,-12.517)
C5: (-117.240,49.692,-13.118)
C4: (-116.974,50.443,-14.245)
P: (-122.209,48.522,-14.980)
C4': (-120.506,51.478,-16.882)
C2': (-118.112,51.433,-17.052)
C2: (-114.843,49.908,-14.198)
N1: (-114.957,49.155,-13.098)
N3: (-115.784,50.589,-14.844)
N6: (-116.322,48.283,-11.407)
N7: (-118.572,49.747,-12.771)
N9: (-118.186,50.954,-14.615)
O5': (-121.397,49.857,-15.328)
O3': (-119.483,50.870,-18.991)
OP2: (-121.272,47.476,-14.477)
C3': (-119.367,50.768,-17.593)
C1': (-118.548,51.890,-15.679)
C5': (-121.674,50.607,-16.510)
O4': (-119.932,52.020,-15.675)
C8: (-119.086,50.522,-13.684)
O2': (-117.778,52.580,-17.815)
C6: (-116.173,49.023,-12.517)
C5: (-117.240,49.692,-13.118)
C4: (-116.974,50.443,-14.245)
P: (-122.209,48.522,-14.980)
C4': (-120.506,51.478,-16.882)
C2': (-118.112,51.433,-17.052)
C2: (-114.843,49.908,-14.198)
N1: (-114.957,49.155,-13.098)
N3: (-115.784,50.589,-14.844)
N6: (-116.322,48.283,-11.407)
N7: (-118.572,49.747,-12.771)
N9: (-118.186,50.954,-14.615)
O5': (-121.397,49.857,-15.328)
O3': (-119.483,50.870,-18.991)
Image (generated by PyMOL):