ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A940:A972

Extra

PDB:
ATOM 1 O3' G A 939 54.408 63.420 99.881 1.00 40.00 O
ATOM 2 P G A 940 55.961 63.375 100.328 1.00 38.73 P
ATOM 3 OP1 G A 940 56.720 63.920 99.176 1.00 38.26 O
ATOM 4 OP2 G A 940 56.370 62.063 100.910 1.00 35.28 O
ATOM 5 O5' G A 940 55.965 64.475 101.478 1.00 39.53 O
ATOM 6 C5' G A 940 56.991 64.527 102.473 1.00 42.85 C
ATOM 7 C4' G A 940 56.399 64.953 103.796 1.00 44.32 C
ATOM 8 O4' G A 940 55.159 64.228 104.008 1.00 45.48 O
ATOM 9 C3' G A 940 57.280 64.631 104.993 1.00 46.45 C
ATOM 10 O3' G A 940 56.987 65.541 106.059 1.00 47.11 O
ATOM 11 C2' G A 940 56.806 63.226 105.352 1.00 46.36 C
ATOM 12 O2' G A 940 57.125 62.887 106.680 1.00 48.78 O
ATOM 13 C1' G A 940 55.292 63.356 105.120 1.00 47.14 C
ATOM 14 N9 G A 940 54.557 62.130 104.799 1.00 48.40 N
ATOM 15 C8 G A 940 54.878 61.235 103.809 1.00 49.33 C
ATOM 16 N7 G A 940 54.024 60.257 103.701 1.00 50.47 N
ATOM 17 C5 G A 940 53.081 60.505 104.692 1.00 49.73 C
ATOM 18 C6 G A 940 51.910 59.780 105.054 1.00 50.69 C
ATOM 19 O6 G A 940 51.452 58.745 104.555 1.00 52.78 O
ATOM 20 N1 G A 940 51.244 60.382 106.113 1.00 50.55 N
ATOM 21 C2 G A 940 51.638 61.531 106.744 1.00 49.95 C
ATOM 22 N2 G A 940 50.839 61.946 107.754 1.00 49.29 N
ATOM 23 N3 G A 940 52.725 62.219 106.415 1.00 49.89 N
ATOM 24 C4 G A 940 53.395 61.653 105.387 1.00 48.81 C
ATOM 25 P U A 941 57.702 66.986 106.115 1.00 47.63 P
ATOM 26 OP1 U A 941 58.133 67.358 104.753 1.00 46.23 O
ATOM 27 OP2 U A 941 58.678 67.062 107.253 1.00 46.75 O
ATOM 28 O5' U A 941 56.522 67.979 106.473 1.00 45.36 O
TER

ATOM 1 O3' A B 971 48.042 59.422 110.213 1.00 40.43 O
ATOM 2 P A B 972 47.833 59.585 108.628 1.00 39.07 P
ATOM 3 OP1 A B 972 46.465 59.137 108.291 1.00 39.31 O
ATOM 4 OP2 A B 972 48.993 59.008 107.900 1.00 37.47 O
ATOM 5 O5' A B 972 47.858 61.163 108.448 1.00 38.18 O
ATOM 6 C5' A B 972 46.641 61.894 108.208 1.00 35.37 C
ATOM 7 C4' A B 972 46.045 62.352 109.505 1.00 34.56 C
ATOM 8 O4' A B 972 47.055 63.024 110.288 1.00 34.95 O
ATOM 9 C3' A B 972 44.953 63.388 109.358 1.00 34.33 C
ATOM 10 O3' A B 972 43.717 62.791 109.079 1.00 35.45 O
ATOM 11 C2' A B 972 44.986 64.086 110.706 1.00 34.68 C
ATOM 12 O2' A B 972 44.402 63.334 111.747 1.00 33.93 O
ATOM 13 C1' A B 972 46.491 64.151 110.942 1.00 35.26 C
ATOM 14 N9 A B 972 47.093 65.347 110.353 1.00 36.57 N
ATOM 15 C8 A B 972 48.094 65.402 109.414 1.00 35.68 C
ATOM 16 N7 A B 972 48.468 66.617 109.111 1.00 34.89 N
ATOM 17 C5 A B 972 47.657 67.421 109.897 1.00 35.34 C
ATOM 18 C6 A B 972 47.589 68.801 110.061 1.00 34.98 C
ATOM 19 N6 A B 972 48.396 69.649 109.435 1.00 34.90 N
ATOM 20 N1 A B 972 46.658 69.291 110.911 1.00 36.62 N
ATOM 21 C2 A B 972 45.861 68.430 111.558 1.00 36.72 C
ATOM 22 N3 A B 972 45.843 67.106 111.503 1.00 37.58 N
ATOM 23 C4 A B 972 46.784 66.655 110.646 1.00 36.83 C
ATOM 24 P A B 973 42.967 63.120 107.701 1.00 36.84 P
ATOM 25 OP1 A B 973 41.849 62.159 107.669 1.00 38.00 O
ATOM 26 OP2 A B 973 43.925 63.139 106.583 1.00 37.30 O
ATOM 27 O5' A B 973 42.428 64.604 107.918 1.00 35.54 O
TER

Atoms:
OP1: (56.720,63.920,99.176)
OP2: (56.370,62.063,100.910)
C3': (57.280,64.631,104.993)
C1': (55.292,63.356,105.120)
C5': (56.991,64.527,102.473)
O6: (51.452,58.745,104.555)
O4': (55.159,64.228,104.008)
C8: (54.878,61.235,103.809)
C2: (51.638,61.531,106.744)
C6: (51.910,59.780,105.054)
C5: (53.081,60.505,104.692)
C4: (53.395,61.653,105.387)
P: (55.961,63.375,100.328)
C4': (56.399,64.953,103.796)
C2': (56.806,63.226,105.352)
O2': (57.125,62.887,106.680)
N1: (51.244,60.382,106.113)
N2: (50.839,61.946,107.754)
N3: (52.725,62.219,106.415)
N7: (54.024,60.257,103.701)
N9: (54.557,62.130,104.799)
O5': (55.965,64.475,101.478)
O3': (56.987,65.541,106.059)
OP1: (46.465,59.137,108.291)
OP2: (48.993,59.008,107.900)
C3': (44.953,63.388,109.358)
C1': (46.491,64.151,110.942)
C5': (46.641,61.894,108.208)
O4': (47.055,63.024,110.288)
C8: (48.094,65.402,109.414)
O2': (44.402,63.334,111.747)
C6: (47.589,68.801,110.061)
C5: (47.657,67.421,109.897)
C4: (46.784,66.655,110.646)
P: (47.833,59.585,108.628)
C4': (46.045,62.352,109.505)
C2': (44.986,64.086,110.706)
C2: (45.861,68.430,111.558)
N1: (46.658,69.291,110.911)
N3: (45.843,67.106,111.503)
N6: (48.396,69.649,109.435)
N7: (48.468,66.617,109.111)
N9: (47.093,65.347,110.353)
O5': (47.858,61.163,108.448)
O3': (43.717,62.791,109.079)
Image (generated by PyMOL):
PyMOL image
show in jmol