Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2375:A2409
Extra
PDB:
ATOM 1 O3' U A2374 -120.462 -43.021 46.602 1.00 61.70 O
ATOM 2 P G A2375 -119.702 -42.585 47.919 1.00 76.70 P
ATOM 3 OP1 G A2375 -120.269 -43.375 49.033 1.00 82.52 O
ATOM 4 OP2 G A2375 -119.720 -41.114 47.946 1.00 69.12 O
ATOM 5 O5' G A2375 -118.187 -43.027 47.661 1.00 95.14 O
ATOM 6 C5' G A2375 -117.805 -44.385 47.850 1.00 88.36 C
ATOM 7 C4' G A2375 -116.315 -44.542 47.642 1.00 63.20 C
ATOM 8 O4' G A2375 -116.010 -44.154 46.282 1.00 51.95 O
ATOM 9 C3' G A2375 -115.468 -43.656 48.553 1.00 65.35 C
ATOM 10 O3' G A2375 -114.417 -44.390 49.173 1.00 62.65 O
ATOM 11 C2' G A2375 -114.927 -42.600 47.599 1.00 61.98 C
ATOM 12 O2' G A2375 -113.659 -42.118 47.988 1.00 61.94 O
ATOM 13 C1' G A2375 -114.797 -43.441 46.345 1.00 65.07 C
ATOM 14 N9 G A2375 -114.573 -42.680 45.121 1.00 72.79 N
ATOM 15 C8 G A2375 -115.393 -41.747 44.535 1.00 71.73 C
ATOM 16 N7 G A2375 -114.903 -41.246 43.436 1.00 64.44 N
ATOM 17 C5 G A2375 -113.680 -41.888 43.291 1.00 65.34 C
ATOM 18 C6 G A2375 -112.689 -41.761 42.285 1.00 67.46 C
ATOM 19 O6 G A2375 -112.706 -41.026 41.290 1.00 83.11 O
ATOM 20 N1 G A2375 -111.592 -42.598 42.502 1.00 59.57 N
ATOM 21 C2 G A2375 -111.472 -43.452 43.564 1.00 65.55 C
ATOM 22 N2 G A2375 -110.342 -44.163 43.588 1.00 74.62 N
ATOM 23 N3 G A2375 -112.386 -43.587 44.519 1.00 61.28 N
ATOM 24 C4 G A2375 -113.460 -42.774 44.318 1.00 70.86 C
ATOM 25 P A A2376 -114.342 -44.440 50.775 1.00 56.21 P
ATOM 26 OP1 A A2376 -115.733 -44.394 51.225 1.00 66.78 O
ATOM 27 OP2 A A2376 -113.367 -43.442 51.265 1.00 65.25 O
ATOM 28 O5' A A2376 -113.765 -45.886 51.102 1.00 53.61 O
TER
ATOM 1 O3' C B2408 -108.089 -40.826 40.748 1.00 51.20 O
ATOM 2 P A B2409 -108.168 -42.251 40.028 1.00 35.44 P
ATOM 3 OP1 A B2409 -108.966 -43.184 40.855 1.00 55.29 O
ATOM 4 OP2 A B2409 -106.785 -42.594 39.615 1.00 45.39 O
ATOM 5 O5' A B2409 -108.998 -41.924 38.706 1.00 46.62 O
ATOM 6 C5' A B2409 -110.129 -41.100 38.781 1.00 44.71 C
ATOM 7 C4' A B2409 -110.583 -40.816 37.371 1.00 44.77 C
ATOM 8 O4' A B2409 -112.008 -40.529 37.373 1.00 54.05 O
ATOM 9 C3' A B2409 -109.927 -39.604 36.733 1.00 39.22 C
ATOM 10 O3' A B2409 -110.071 -39.675 35.331 1.00 37.56 O
ATOM 11 C2' A B2409 -110.828 -38.498 37.239 1.00 56.01 C
ATOM 12 O2' A B2409 -110.692 -37.352 36.427 1.00 60.86 O
ATOM 13 C1' A B2409 -112.195 -39.163 37.027 1.00 64.60 C
ATOM 14 N9 A B2409 -113.320 -38.634 37.815 1.00 64.86 N
ATOM 15 C8 A B2409 -113.616 -38.885 39.130 1.00 64.58 C
ATOM 16 N7 A B2409 -114.688 -38.280 39.580 1.00 58.08 N
ATOM 17 C5 A B2409 -115.134 -37.590 38.470 1.00 63.86 C
ATOM 18 C6 A B2409 -116.238 -36.748 38.276 1.00 71.94 C
ATOM 19 N6 A B2409 -117.108 -36.468 39.249 1.00 74.47 N
ATOM 20 N1 A B2409 -116.409 -36.205 37.052 1.00 75.80 N
ATOM 21 C2 A B2409 -115.529 -36.494 36.089 1.00 76.77 C
ATOM 22 N3 A B2409 -114.452 -37.272 36.153 1.00 72.69 N
ATOM 23 C4 A B2409 -114.312 -37.792 37.380 1.00 63.81 C
ATOM 24 P A B2410 -108.879 -40.203 34.409 1.00 40.08 P
ATOM 25 OP1 A B2410 -107.706 -39.453 34.915 1.00 53.47 O
ATOM 26 OP2 A B2410 -109.247 -40.146 32.979 1.00 40.80 O
ATOM 27 O5' A B2410 -108.716 -41.763 34.738 1.00 45.90 O
TER
ATOM 2 P G A2375 -119.702 -42.585 47.919 1.00 76.70 P
ATOM 3 OP1 G A2375 -120.269 -43.375 49.033 1.00 82.52 O
ATOM 4 OP2 G A2375 -119.720 -41.114 47.946 1.00 69.12 O
ATOM 5 O5' G A2375 -118.187 -43.027 47.661 1.00 95.14 O
ATOM 6 C5' G A2375 -117.805 -44.385 47.850 1.00 88.36 C
ATOM 7 C4' G A2375 -116.315 -44.542 47.642 1.00 63.20 C
ATOM 8 O4' G A2375 -116.010 -44.154 46.282 1.00 51.95 O
ATOM 9 C3' G A2375 -115.468 -43.656 48.553 1.00 65.35 C
ATOM 10 O3' G A2375 -114.417 -44.390 49.173 1.00 62.65 O
ATOM 11 C2' G A2375 -114.927 -42.600 47.599 1.00 61.98 C
ATOM 12 O2' G A2375 -113.659 -42.118 47.988 1.00 61.94 O
ATOM 13 C1' G A2375 -114.797 -43.441 46.345 1.00 65.07 C
ATOM 14 N9 G A2375 -114.573 -42.680 45.121 1.00 72.79 N
ATOM 15 C8 G A2375 -115.393 -41.747 44.535 1.00 71.73 C
ATOM 16 N7 G A2375 -114.903 -41.246 43.436 1.00 64.44 N
ATOM 17 C5 G A2375 -113.680 -41.888 43.291 1.00 65.34 C
ATOM 18 C6 G A2375 -112.689 -41.761 42.285 1.00 67.46 C
ATOM 19 O6 G A2375 -112.706 -41.026 41.290 1.00 83.11 O
ATOM 20 N1 G A2375 -111.592 -42.598 42.502 1.00 59.57 N
ATOM 21 C2 G A2375 -111.472 -43.452 43.564 1.00 65.55 C
ATOM 22 N2 G A2375 -110.342 -44.163 43.588 1.00 74.62 N
ATOM 23 N3 G A2375 -112.386 -43.587 44.519 1.00 61.28 N
ATOM 24 C4 G A2375 -113.460 -42.774 44.318 1.00 70.86 C
ATOM 25 P A A2376 -114.342 -44.440 50.775 1.00 56.21 P
ATOM 26 OP1 A A2376 -115.733 -44.394 51.225 1.00 66.78 O
ATOM 27 OP2 A A2376 -113.367 -43.442 51.265 1.00 65.25 O
ATOM 28 O5' A A2376 -113.765 -45.886 51.102 1.00 53.61 O
TER
ATOM 1 O3' C B2408 -108.089 -40.826 40.748 1.00 51.20 O
ATOM 2 P A B2409 -108.168 -42.251 40.028 1.00 35.44 P
ATOM 3 OP1 A B2409 -108.966 -43.184 40.855 1.00 55.29 O
ATOM 4 OP2 A B2409 -106.785 -42.594 39.615 1.00 45.39 O
ATOM 5 O5' A B2409 -108.998 -41.924 38.706 1.00 46.62 O
ATOM 6 C5' A B2409 -110.129 -41.100 38.781 1.00 44.71 C
ATOM 7 C4' A B2409 -110.583 -40.816 37.371 1.00 44.77 C
ATOM 8 O4' A B2409 -112.008 -40.529 37.373 1.00 54.05 O
ATOM 9 C3' A B2409 -109.927 -39.604 36.733 1.00 39.22 C
ATOM 10 O3' A B2409 -110.071 -39.675 35.331 1.00 37.56 O
ATOM 11 C2' A B2409 -110.828 -38.498 37.239 1.00 56.01 C
ATOM 12 O2' A B2409 -110.692 -37.352 36.427 1.00 60.86 O
ATOM 13 C1' A B2409 -112.195 -39.163 37.027 1.00 64.60 C
ATOM 14 N9 A B2409 -113.320 -38.634 37.815 1.00 64.86 N
ATOM 15 C8 A B2409 -113.616 -38.885 39.130 1.00 64.58 C
ATOM 16 N7 A B2409 -114.688 -38.280 39.580 1.00 58.08 N
ATOM 17 C5 A B2409 -115.134 -37.590 38.470 1.00 63.86 C
ATOM 18 C6 A B2409 -116.238 -36.748 38.276 1.00 71.94 C
ATOM 19 N6 A B2409 -117.108 -36.468 39.249 1.00 74.47 N
ATOM 20 N1 A B2409 -116.409 -36.205 37.052 1.00 75.80 N
ATOM 21 C2 A B2409 -115.529 -36.494 36.089 1.00 76.77 C
ATOM 22 N3 A B2409 -114.452 -37.272 36.153 1.00 72.69 N
ATOM 23 C4 A B2409 -114.312 -37.792 37.380 1.00 63.81 C
ATOM 24 P A B2410 -108.879 -40.203 34.409 1.00 40.08 P
ATOM 25 OP1 A B2410 -107.706 -39.453 34.915 1.00 53.47 O
ATOM 26 OP2 A B2410 -109.247 -40.146 32.979 1.00 40.80 O
ATOM 27 O5' A B2410 -108.716 -41.763 34.738 1.00 45.90 O
TER
Atoms:
OP1: (-120.269,-43.375,49.033)
OP2: (-119.720,-41.114,47.946)
C3': (-115.468,-43.656,48.553)
C1': (-114.797,-43.441,46.345)
C5': (-117.805,-44.385,47.850)
O6: (-112.706,-41.026,41.290)
O4': (-116.010,-44.154,46.282)
C8: (-115.393,-41.747,44.535)
C2: (-111.472,-43.452,43.564)
C6: (-112.689,-41.761,42.285)
C5: (-113.680,-41.888,43.291)
C4: (-113.460,-42.774,44.318)
P: (-119.702,-42.585,47.919)
C4': (-116.315,-44.542,47.642)
C2': (-114.927,-42.600,47.599)
O2': (-113.659,-42.118,47.988)
N1: (-111.592,-42.598,42.502)
N2: (-110.342,-44.163,43.588)
N3: (-112.386,-43.587,44.519)
N7: (-114.903,-41.246,43.436)
N9: (-114.573,-42.680,45.121)
O5': (-118.187,-43.027,47.661)
O3': (-114.417,-44.390,49.173)
OP2: (-119.720,-41.114,47.946)
C3': (-115.468,-43.656,48.553)
C1': (-114.797,-43.441,46.345)
C5': (-117.805,-44.385,47.850)
O6: (-112.706,-41.026,41.290)
O4': (-116.010,-44.154,46.282)
C8: (-115.393,-41.747,44.535)
C2: (-111.472,-43.452,43.564)
C6: (-112.689,-41.761,42.285)
C5: (-113.680,-41.888,43.291)
C4: (-113.460,-42.774,44.318)
P: (-119.702,-42.585,47.919)
C4': (-116.315,-44.542,47.642)
C2': (-114.927,-42.600,47.599)
O2': (-113.659,-42.118,47.988)
N1: (-111.592,-42.598,42.502)
N2: (-110.342,-44.163,43.588)
N3: (-112.386,-43.587,44.519)
N7: (-114.903,-41.246,43.436)
N9: (-114.573,-42.680,45.121)
O5': (-118.187,-43.027,47.661)
O3': (-114.417,-44.390,49.173)
OP1: (-108.966,-43.184,40.855)
OP2: (-106.785,-42.594,39.615)
C3': (-109.927,-39.604,36.733)
C1': (-112.195,-39.163,37.027)
C5': (-110.129,-41.100,38.781)
O4': (-112.008,-40.529,37.373)
C8: (-113.616,-38.885,39.130)
O2': (-110.692,-37.352,36.427)
C6: (-116.238,-36.748,38.276)
C5: (-115.134,-37.590,38.470)
C4: (-114.312,-37.792,37.380)
P: (-108.168,-42.251,40.028)
C4': (-110.583,-40.816,37.371)
C2': (-110.828,-38.498,37.239)
C2: (-115.529,-36.494,36.089)
N1: (-116.409,-36.205,37.052)
N3: (-114.452,-37.272,36.153)
N6: (-117.108,-36.468,39.249)
N7: (-114.688,-38.280,39.580)
N9: (-113.320,-38.634,37.815)
O5': (-108.998,-41.924,38.706)
O3': (-110.071,-39.675,35.331)
OP2: (-106.785,-42.594,39.615)
C3': (-109.927,-39.604,36.733)
C1': (-112.195,-39.163,37.027)
C5': (-110.129,-41.100,38.781)
O4': (-112.008,-40.529,37.373)
C8: (-113.616,-38.885,39.130)
O2': (-110.692,-37.352,36.427)
C6: (-116.238,-36.748,38.276)
C5: (-115.134,-37.590,38.470)
C4: (-114.312,-37.792,37.380)
P: (-108.168,-42.251,40.028)
C4': (-110.583,-40.816,37.371)
C2': (-110.828,-38.498,37.239)
C2: (-115.529,-36.494,36.089)
N1: (-116.409,-36.205,37.052)
N3: (-114.452,-37.272,36.153)
N6: (-117.108,-36.468,39.249)
N7: (-114.688,-38.280,39.580)
N9: (-113.320,-38.634,37.815)
O5': (-108.998,-41.924,38.706)
O3': (-110.071,-39.675,35.331)
Image (generated by PyMOL):