Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0470:0473
Extra
PDB:
ATOM 1 O3' U A 469 24.712 149.421 56.437 1.00 51.30 O
ATOM 2 P G A 470 24.043 148.427 55.368 1.00 53.66 P
ATOM 3 OP1 G A 470 23.188 147.466 56.112 1.00 52.76 O
ATOM 4 OP2 G A 470 25.089 147.913 54.438 1.00 51.60 O
ATOM 5 O5' G A 470 23.106 149.394 54.529 1.00 53.15 O
ATOM 6 C5' G A 470 22.044 150.113 55.163 1.00 53.13 C
ATOM 7 C4' G A 470 21.464 151.118 54.212 1.00 52.87 C
ATOM 8 O4' G A 470 22.400 152.206 54.022 1.00 53.81 O
ATOM 9 C3' G A 470 21.232 150.632 52.796 1.00 53.78 C
ATOM 10 O3' G A 470 20.077 149.820 52.689 1.00 54.13 O
ATOM 11 C2' G A 470 21.104 151.951 52.051 1.00 55.09 C
ATOM 12 O2' G A 470 19.855 152.579 52.247 1.00 59.82 O
ATOM 13 C1' G A 470 22.178 152.788 52.750 1.00 55.48 C
ATOM 14 N9 G A 470 23.415 152.769 51.980 1.00 55.59 N
ATOM 15 C8 G A 470 24.381 151.794 51.954 1.00 55.28 C
ATOM 16 N7 G A 470 25.313 152.022 51.069 1.00 55.56 N
ATOM 17 C5 G A 470 24.953 153.232 50.494 1.00 55.45 C
ATOM 18 C6 G A 470 25.568 153.981 49.454 1.00 54.62 C
ATOM 19 O6 G A 470 26.575 153.703 48.796 1.00 54.22 O
ATOM 20 N1 G A 470 24.876 155.162 49.195 1.00 55.30 N
ATOM 21 C2 G A 470 23.732 155.569 49.843 1.00 55.34 C
ATOM 22 N2 G A 470 23.211 156.746 49.459 1.00 54.75 N
ATOM 23 N3 G A 470 23.141 154.873 50.798 1.00 56.22 N
ATOM 24 C4 G A 470 23.801 153.723 51.070 1.00 56.64 C
ATOM 25 P C A 471 20.034 148.632 51.604 1.00 57.06 P
ATOM 26 OP1 C A 471 18.857 147.784 51.918 1.00 57.92 O
ATOM 27 OP2 C A 471 21.377 148.004 51.483 1.00 56.43 O
ATOM 28 O5' C A 471 19.745 149.379 50.229 1.00 59.49 O
TER
ATOM 1 O3' A B 472 22.882 156.499 45.361 1.00 52.60 O
ATOM 2 P A B 473 24.317 157.039 45.853 1.00 53.63 P
ATOM 3 OP1 A B 473 24.939 157.700 44.680 1.00 52.07 O
ATOM 4 OP2 A B 473 25.028 155.924 46.521 1.00 52.76 O
ATOM 5 O5' A B 473 23.974 158.168 46.930 1.00 52.93 O
ATOM 6 C5' A B 473 24.926 159.207 47.239 1.00 54.75 C
ATOM 7 C4' A B 473 24.336 160.209 48.212 1.00 56.80 C
ATOM 8 O4' A B 473 23.827 159.517 49.391 1.00 56.05 O
ATOM 9 C3' A B 473 25.345 161.238 48.736 1.00 58.56 C
ATOM 10 O3' A B 473 24.701 162.454 49.132 1.00 61.29 O
ATOM 11 C2' A B 473 25.788 160.590 50.042 1.00 58.70 C
ATOM 12 O2' A B 473 26.348 161.504 50.964 1.00 59.02 O
ATOM 13 C1' A B 473 24.445 160.061 50.537 1.00 56.54 C
ATOM 14 N9 A B 473 24.480 159.066 51.607 1.00 54.18 N
ATOM 15 C8 A B 473 25.225 157.921 51.725 1.00 53.32 C
ATOM 16 N7 A B 473 25.017 157.271 52.843 1.00 52.86 N
ATOM 17 C5 A B 473 24.065 158.038 53.502 1.00 52.64 C
ATOM 18 C6 A B 473 23.419 157.892 54.743 1.00 52.51 C
ATOM 19 N6 A B 473 23.646 156.883 55.580 1.00 52.30 N
ATOM 20 N1 A B 473 22.520 158.833 55.100 1.00 53.20 N
ATOM 21 C2 A B 473 22.297 159.852 54.266 1.00 53.37 C
ATOM 22 N3 A B 473 22.840 160.100 53.077 1.00 53.24 N
ATOM 23 C4 A B 473 23.725 159.143 52.750 1.00 53.21 C
ATOM 24 P A B 474 24.096 163.464 48.036 1.00 62.86 P
ATOM 25 OP1 A B 474 24.253 162.875 46.666 1.00 59.96 O
ATOM 26 OP2 A B 474 24.652 164.812 48.324 1.00 61.25 O
ATOM 27 O5' A B 474 22.553 163.510 48.434 1.00 59.05 O
TER
ATOM 2 P G A 470 24.043 148.427 55.368 1.00 53.66 P
ATOM 3 OP1 G A 470 23.188 147.466 56.112 1.00 52.76 O
ATOM 4 OP2 G A 470 25.089 147.913 54.438 1.00 51.60 O
ATOM 5 O5' G A 470 23.106 149.394 54.529 1.00 53.15 O
ATOM 6 C5' G A 470 22.044 150.113 55.163 1.00 53.13 C
ATOM 7 C4' G A 470 21.464 151.118 54.212 1.00 52.87 C
ATOM 8 O4' G A 470 22.400 152.206 54.022 1.00 53.81 O
ATOM 9 C3' G A 470 21.232 150.632 52.796 1.00 53.78 C
ATOM 10 O3' G A 470 20.077 149.820 52.689 1.00 54.13 O
ATOM 11 C2' G A 470 21.104 151.951 52.051 1.00 55.09 C
ATOM 12 O2' G A 470 19.855 152.579 52.247 1.00 59.82 O
ATOM 13 C1' G A 470 22.178 152.788 52.750 1.00 55.48 C
ATOM 14 N9 G A 470 23.415 152.769 51.980 1.00 55.59 N
ATOM 15 C8 G A 470 24.381 151.794 51.954 1.00 55.28 C
ATOM 16 N7 G A 470 25.313 152.022 51.069 1.00 55.56 N
ATOM 17 C5 G A 470 24.953 153.232 50.494 1.00 55.45 C
ATOM 18 C6 G A 470 25.568 153.981 49.454 1.00 54.62 C
ATOM 19 O6 G A 470 26.575 153.703 48.796 1.00 54.22 O
ATOM 20 N1 G A 470 24.876 155.162 49.195 1.00 55.30 N
ATOM 21 C2 G A 470 23.732 155.569 49.843 1.00 55.34 C
ATOM 22 N2 G A 470 23.211 156.746 49.459 1.00 54.75 N
ATOM 23 N3 G A 470 23.141 154.873 50.798 1.00 56.22 N
ATOM 24 C4 G A 470 23.801 153.723 51.070 1.00 56.64 C
ATOM 25 P C A 471 20.034 148.632 51.604 1.00 57.06 P
ATOM 26 OP1 C A 471 18.857 147.784 51.918 1.00 57.92 O
ATOM 27 OP2 C A 471 21.377 148.004 51.483 1.00 56.43 O
ATOM 28 O5' C A 471 19.745 149.379 50.229 1.00 59.49 O
TER
ATOM 1 O3' A B 472 22.882 156.499 45.361 1.00 52.60 O
ATOM 2 P A B 473 24.317 157.039 45.853 1.00 53.63 P
ATOM 3 OP1 A B 473 24.939 157.700 44.680 1.00 52.07 O
ATOM 4 OP2 A B 473 25.028 155.924 46.521 1.00 52.76 O
ATOM 5 O5' A B 473 23.974 158.168 46.930 1.00 52.93 O
ATOM 6 C5' A B 473 24.926 159.207 47.239 1.00 54.75 C
ATOM 7 C4' A B 473 24.336 160.209 48.212 1.00 56.80 C
ATOM 8 O4' A B 473 23.827 159.517 49.391 1.00 56.05 O
ATOM 9 C3' A B 473 25.345 161.238 48.736 1.00 58.56 C
ATOM 10 O3' A B 473 24.701 162.454 49.132 1.00 61.29 O
ATOM 11 C2' A B 473 25.788 160.590 50.042 1.00 58.70 C
ATOM 12 O2' A B 473 26.348 161.504 50.964 1.00 59.02 O
ATOM 13 C1' A B 473 24.445 160.061 50.537 1.00 56.54 C
ATOM 14 N9 A B 473 24.480 159.066 51.607 1.00 54.18 N
ATOM 15 C8 A B 473 25.225 157.921 51.725 1.00 53.32 C
ATOM 16 N7 A B 473 25.017 157.271 52.843 1.00 52.86 N
ATOM 17 C5 A B 473 24.065 158.038 53.502 1.00 52.64 C
ATOM 18 C6 A B 473 23.419 157.892 54.743 1.00 52.51 C
ATOM 19 N6 A B 473 23.646 156.883 55.580 1.00 52.30 N
ATOM 20 N1 A B 473 22.520 158.833 55.100 1.00 53.20 N
ATOM 21 C2 A B 473 22.297 159.852 54.266 1.00 53.37 C
ATOM 22 N3 A B 473 22.840 160.100 53.077 1.00 53.24 N
ATOM 23 C4 A B 473 23.725 159.143 52.750 1.00 53.21 C
ATOM 24 P A B 474 24.096 163.464 48.036 1.00 62.86 P
ATOM 25 OP1 A B 474 24.253 162.875 46.666 1.00 59.96 O
ATOM 26 OP2 A B 474 24.652 164.812 48.324 1.00 61.25 O
ATOM 27 O5' A B 474 22.553 163.510 48.434 1.00 59.05 O
TER
Atoms:
OP1: (23.188,147.466,56.112)
OP2: (25.089,147.913,54.438)
C3': (21.232,150.632,52.796)
C1': (22.178,152.788,52.750)
C5': (22.044,150.113,55.163)
O6: (26.575,153.703,48.796)
O4': (22.400,152.206,54.022)
C8: (24.381,151.794,51.954)
C2: (23.732,155.569,49.843)
C6: (25.568,153.981,49.454)
C5: (24.953,153.232,50.494)
C4: (23.801,153.723,51.070)
P: (24.043,148.427,55.368)
C4': (21.464,151.118,54.212)
C2': (21.104,151.951,52.051)
O2': (19.855,152.579,52.247)
N1: (24.876,155.162,49.195)
N2: (23.211,156.746,49.459)
N3: (23.141,154.873,50.798)
N7: (25.313,152.022,51.069)
N9: (23.415,152.769,51.980)
O5': (23.106,149.394,54.529)
O3': (20.077,149.820,52.689)
OP2: (25.089,147.913,54.438)
C3': (21.232,150.632,52.796)
C1': (22.178,152.788,52.750)
C5': (22.044,150.113,55.163)
O6: (26.575,153.703,48.796)
O4': (22.400,152.206,54.022)
C8: (24.381,151.794,51.954)
C2: (23.732,155.569,49.843)
C6: (25.568,153.981,49.454)
C5: (24.953,153.232,50.494)
C4: (23.801,153.723,51.070)
P: (24.043,148.427,55.368)
C4': (21.464,151.118,54.212)
C2': (21.104,151.951,52.051)
O2': (19.855,152.579,52.247)
N1: (24.876,155.162,49.195)
N2: (23.211,156.746,49.459)
N3: (23.141,154.873,50.798)
N7: (25.313,152.022,51.069)
N9: (23.415,152.769,51.980)
O5': (23.106,149.394,54.529)
O3': (20.077,149.820,52.689)
OP1: (24.939,157.700,44.680)
OP2: (25.028,155.924,46.521)
C3': (25.345,161.238,48.736)
C1': (24.445,160.061,50.537)
C5': (24.926,159.207,47.239)
O4': (23.827,159.517,49.391)
C8: (25.225,157.921,51.725)
O2': (26.348,161.504,50.964)
C6: (23.419,157.892,54.743)
C5: (24.065,158.038,53.502)
C4: (23.725,159.143,52.750)
P: (24.317,157.039,45.853)
C4': (24.336,160.209,48.212)
C2': (25.788,160.590,50.042)
C2: (22.297,159.852,54.266)
N1: (22.520,158.833,55.100)
N3: (22.840,160.100,53.077)
N6: (23.646,156.883,55.580)
N7: (25.017,157.271,52.843)
N9: (24.480,159.066,51.607)
O5': (23.974,158.168,46.930)
O3': (24.701,162.454,49.132)
OP2: (25.028,155.924,46.521)
C3': (25.345,161.238,48.736)
C1': (24.445,160.061,50.537)
C5': (24.926,159.207,47.239)
O4': (23.827,159.517,49.391)
C8: (25.225,157.921,51.725)
O2': (26.348,161.504,50.964)
C6: (23.419,157.892,54.743)
C5: (24.065,158.038,53.502)
C4: (23.725,159.143,52.750)
P: (24.317,157.039,45.853)
C4': (24.336,160.209,48.212)
C2': (25.788,160.590,50.042)
C2: (22.297,159.852,54.266)
N1: (22.520,158.833,55.100)
N3: (22.840,160.100,53.077)
N6: (23.646,156.883,55.580)
N7: (25.017,157.271,52.843)
N9: (24.480,159.066,51.607)
O5': (23.974,158.168,46.930)
O3': (24.701,162.454,49.132)
Image (generated by PyMOL):