Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0452:0464
Extra
PDB:
ATOM 1 O3' A A 451 52.284 142.300 49.472 1.00 37.26 O
ATOM 2 P G A 452 52.760 142.088 47.960 1.00 41.18 P
ATOM 3 OP1 G A 452 53.079 143.435 47.428 1.00 41.02 O
ATOM 4 OP2 G A 452 51.779 141.233 47.247 1.00 40.87 O
ATOM 5 O5' G A 452 54.099 141.237 48.128 1.00 37.41 O
ATOM 6 C5' G A 452 55.337 141.862 48.497 1.00 35.31 C
ATOM 7 C4' G A 452 55.353 142.167 49.979 1.00 37.40 C
ATOM 8 O4' G A 452 55.166 140.944 50.758 1.00 38.78 O
ATOM 9 C3' G A 452 56.647 142.785 50.504 1.00 35.44 C
ATOM 10 O3' G A 452 56.287 143.645 51.579 1.00 37.73 O
ATOM 11 C2' G A 452 57.381 141.571 51.052 1.00 33.84 C
ATOM 12 O2' G A 452 58.387 141.907 51.977 1.00 33.64 O
ATOM 13 C1' G A 452 56.211 140.844 51.706 1.00 34.56 C
ATOM 14 N9 G A 452 56.393 139.447 52.086 1.00 32.68 N
ATOM 15 C8 G A 452 56.977 138.440 51.355 1.00 32.84 C
ATOM 16 N7 G A 452 56.974 137.291 51.974 1.00 31.32 N
ATOM 17 C5 G A 452 56.351 137.555 53.186 1.00 31.05 C
ATOM 18 C6 G A 452 56.054 136.693 54.272 1.00 30.88 C
ATOM 19 O6 G A 452 56.284 135.482 54.381 1.00 31.63 O
ATOM 20 N1 G A 452 55.422 137.375 55.307 1.00 29.40 N
ATOM 21 C2 G A 452 55.111 138.710 55.295 1.00 30.51 C
ATOM 22 N2 G A 452 54.507 139.180 56.393 1.00 30.86 N
ATOM 23 N3 G A 452 55.375 139.524 54.283 1.00 28.94 N
ATOM 24 C4 G A 452 55.993 138.883 53.272 1.00 30.89 C
ATOM 25 P U A 453 57.322 144.750 52.123 1.00 40.46 P
ATOM 26 OP1 U A 453 58.162 145.232 50.987 1.00 36.36 O
ATOM 27 OP2 U A 453 57.981 144.216 53.350 1.00 37.34 O
ATOM 28 O5' U A 453 56.354 145.923 52.586 1.00 35.39 O
TER
ATOM 1 O3' G B 463 54.651 137.193 60.234 1.00 27.37 O
ATOM 2 P A B 464 53.595 136.697 59.131 1.00 26.86 P
ATOM 3 OP1 A B 464 52.634 135.873 59.895 1.00 29.13 O
ATOM 4 OP2 A B 464 54.270 136.123 57.939 1.00 26.16 O
ATOM 5 O5' A B 464 52.892 138.046 58.678 1.00 26.17 O
ATOM 6 C5' A B 464 51.528 138.306 59.002 1.00 26.79 C
ATOM 7 C4' A B 464 51.412 138.768 60.429 1.00 27.54 C
ATOM 8 O4' A B 464 52.292 139.898 60.668 1.00 28.56 O
ATOM 9 C3' A B 464 50.026 139.283 60.746 1.00 29.20 C
ATOM 10 O3' A B 464 49.170 138.210 61.087 1.00 29.78 O
ATOM 11 C2' A B 464 50.283 140.259 61.883 1.00 28.59 C
ATOM 12 O2' A B 464 50.440 139.596 63.117 1.00 30.06 O
ATOM 13 C1' A B 464 51.612 140.884 61.439 1.00 26.96 C
ATOM 14 N9 A B 464 51.450 142.074 60.594 1.00 24.97 N
ATOM 15 C8 A B 464 51.874 142.217 59.298 1.00 25.92 C
ATOM 16 N7 A B 464 51.605 143.388 58.778 1.00 25.36 N
ATOM 17 C5 A B 464 50.963 144.063 59.798 1.00 23.73 C
ATOM 18 C6 A B 464 50.441 145.356 59.876 1.00 25.31 C
ATOM 19 N6 A B 464 50.509 146.237 58.880 1.00 26.13 N
ATOM 20 N1 A B 464 49.846 145.724 61.026 1.00 25.46 N
ATOM 21 C2 A B 464 49.806 144.846 62.032 1.00 25.24 C
ATOM 22 N3 A B 464 50.279 143.605 62.086 1.00 26.91 N
ATOM 23 C4 A B 464 50.852 143.268 60.920 1.00 23.51 C
ATOM 24 P A B 465 47.762 138.057 60.343 1.00 28.94 P
ATOM 25 OP1 A B 465 47.187 136.744 60.707 1.00 31.07 O
ATOM 26 OP2 A B 465 47.944 138.403 58.913 1.00 30.33 O
ATOM 27 O5' A B 465 46.878 139.192 61.017 1.00 30.28 O
TER
ATOM 2 P G A 452 52.760 142.088 47.960 1.00 41.18 P
ATOM 3 OP1 G A 452 53.079 143.435 47.428 1.00 41.02 O
ATOM 4 OP2 G A 452 51.779 141.233 47.247 1.00 40.87 O
ATOM 5 O5' G A 452 54.099 141.237 48.128 1.00 37.41 O
ATOM 6 C5' G A 452 55.337 141.862 48.497 1.00 35.31 C
ATOM 7 C4' G A 452 55.353 142.167 49.979 1.00 37.40 C
ATOM 8 O4' G A 452 55.166 140.944 50.758 1.00 38.78 O
ATOM 9 C3' G A 452 56.647 142.785 50.504 1.00 35.44 C
ATOM 10 O3' G A 452 56.287 143.645 51.579 1.00 37.73 O
ATOM 11 C2' G A 452 57.381 141.571 51.052 1.00 33.84 C
ATOM 12 O2' G A 452 58.387 141.907 51.977 1.00 33.64 O
ATOM 13 C1' G A 452 56.211 140.844 51.706 1.00 34.56 C
ATOM 14 N9 G A 452 56.393 139.447 52.086 1.00 32.68 N
ATOM 15 C8 G A 452 56.977 138.440 51.355 1.00 32.84 C
ATOM 16 N7 G A 452 56.974 137.291 51.974 1.00 31.32 N
ATOM 17 C5 G A 452 56.351 137.555 53.186 1.00 31.05 C
ATOM 18 C6 G A 452 56.054 136.693 54.272 1.00 30.88 C
ATOM 19 O6 G A 452 56.284 135.482 54.381 1.00 31.63 O
ATOM 20 N1 G A 452 55.422 137.375 55.307 1.00 29.40 N
ATOM 21 C2 G A 452 55.111 138.710 55.295 1.00 30.51 C
ATOM 22 N2 G A 452 54.507 139.180 56.393 1.00 30.86 N
ATOM 23 N3 G A 452 55.375 139.524 54.283 1.00 28.94 N
ATOM 24 C4 G A 452 55.993 138.883 53.272 1.00 30.89 C
ATOM 25 P U A 453 57.322 144.750 52.123 1.00 40.46 P
ATOM 26 OP1 U A 453 58.162 145.232 50.987 1.00 36.36 O
ATOM 27 OP2 U A 453 57.981 144.216 53.350 1.00 37.34 O
ATOM 28 O5' U A 453 56.354 145.923 52.586 1.00 35.39 O
TER
ATOM 1 O3' G B 463 54.651 137.193 60.234 1.00 27.37 O
ATOM 2 P A B 464 53.595 136.697 59.131 1.00 26.86 P
ATOM 3 OP1 A B 464 52.634 135.873 59.895 1.00 29.13 O
ATOM 4 OP2 A B 464 54.270 136.123 57.939 1.00 26.16 O
ATOM 5 O5' A B 464 52.892 138.046 58.678 1.00 26.17 O
ATOM 6 C5' A B 464 51.528 138.306 59.002 1.00 26.79 C
ATOM 7 C4' A B 464 51.412 138.768 60.429 1.00 27.54 C
ATOM 8 O4' A B 464 52.292 139.898 60.668 1.00 28.56 O
ATOM 9 C3' A B 464 50.026 139.283 60.746 1.00 29.20 C
ATOM 10 O3' A B 464 49.170 138.210 61.087 1.00 29.78 O
ATOM 11 C2' A B 464 50.283 140.259 61.883 1.00 28.59 C
ATOM 12 O2' A B 464 50.440 139.596 63.117 1.00 30.06 O
ATOM 13 C1' A B 464 51.612 140.884 61.439 1.00 26.96 C
ATOM 14 N9 A B 464 51.450 142.074 60.594 1.00 24.97 N
ATOM 15 C8 A B 464 51.874 142.217 59.298 1.00 25.92 C
ATOM 16 N7 A B 464 51.605 143.388 58.778 1.00 25.36 N
ATOM 17 C5 A B 464 50.963 144.063 59.798 1.00 23.73 C
ATOM 18 C6 A B 464 50.441 145.356 59.876 1.00 25.31 C
ATOM 19 N6 A B 464 50.509 146.237 58.880 1.00 26.13 N
ATOM 20 N1 A B 464 49.846 145.724 61.026 1.00 25.46 N
ATOM 21 C2 A B 464 49.806 144.846 62.032 1.00 25.24 C
ATOM 22 N3 A B 464 50.279 143.605 62.086 1.00 26.91 N
ATOM 23 C4 A B 464 50.852 143.268 60.920 1.00 23.51 C
ATOM 24 P A B 465 47.762 138.057 60.343 1.00 28.94 P
ATOM 25 OP1 A B 465 47.187 136.744 60.707 1.00 31.07 O
ATOM 26 OP2 A B 465 47.944 138.403 58.913 1.00 30.33 O
ATOM 27 O5' A B 465 46.878 139.192 61.017 1.00 30.28 O
TER
Atoms:
OP1: (53.079,143.435,47.428)
OP2: (51.779,141.233,47.247)
C3': (56.647,142.785,50.504)
C1': (56.211,140.844,51.706)
C5': (55.337,141.862,48.497)
O6: (56.284,135.482,54.381)
O4': (55.166,140.944,50.758)
C8: (56.977,138.440,51.355)
C2: (55.111,138.710,55.295)
C6: (56.054,136.693,54.272)
C5: (56.351,137.555,53.186)
C4: (55.993,138.883,53.272)
P: (52.760,142.088,47.960)
C4': (55.353,142.167,49.979)
C2': (57.381,141.571,51.052)
O2': (58.387,141.907,51.977)
N1: (55.422,137.375,55.307)
N2: (54.507,139.180,56.393)
N3: (55.375,139.524,54.283)
N7: (56.974,137.291,51.974)
N9: (56.393,139.447,52.086)
O5': (54.099,141.237,48.128)
O3': (56.287,143.645,51.579)
OP2: (51.779,141.233,47.247)
C3': (56.647,142.785,50.504)
C1': (56.211,140.844,51.706)
C5': (55.337,141.862,48.497)
O6: (56.284,135.482,54.381)
O4': (55.166,140.944,50.758)
C8: (56.977,138.440,51.355)
C2: (55.111,138.710,55.295)
C6: (56.054,136.693,54.272)
C5: (56.351,137.555,53.186)
C4: (55.993,138.883,53.272)
P: (52.760,142.088,47.960)
C4': (55.353,142.167,49.979)
C2': (57.381,141.571,51.052)
O2': (58.387,141.907,51.977)
N1: (55.422,137.375,55.307)
N2: (54.507,139.180,56.393)
N3: (55.375,139.524,54.283)
N7: (56.974,137.291,51.974)
N9: (56.393,139.447,52.086)
O5': (54.099,141.237,48.128)
O3': (56.287,143.645,51.579)
OP1: (52.634,135.873,59.895)
OP2: (54.270,136.123,57.939)
C3': (50.026,139.283,60.746)
C1': (51.612,140.884,61.439)
C5': (51.528,138.306,59.002)
O4': (52.292,139.898,60.668)
C8: (51.874,142.217,59.298)
O2': (50.440,139.596,63.117)
C6: (50.441,145.356,59.876)
C5: (50.963,144.063,59.798)
C4: (50.852,143.268,60.920)
P: (53.595,136.697,59.131)
C4': (51.412,138.768,60.429)
C2': (50.283,140.259,61.883)
C2: (49.806,144.846,62.032)
N1: (49.846,145.724,61.026)
N3: (50.279,143.605,62.086)
N6: (50.509,146.237,58.880)
N7: (51.605,143.388,58.778)
N9: (51.450,142.074,60.594)
O5': (52.892,138.046,58.678)
O3': (49.170,138.210,61.087)
OP2: (54.270,136.123,57.939)
C3': (50.026,139.283,60.746)
C1': (51.612,140.884,61.439)
C5': (51.528,138.306,59.002)
O4': (52.292,139.898,60.668)
C8: (51.874,142.217,59.298)
O2': (50.440,139.596,63.117)
C6: (50.441,145.356,59.876)
C5: (50.963,144.063,59.798)
C4: (50.852,143.268,60.920)
P: (53.595,136.697,59.131)
C4': (51.412,138.768,60.429)
C2': (50.283,140.259,61.883)
C2: (49.806,144.846,62.032)
N1: (49.846,145.724,61.026)
N3: (50.279,143.605,62.086)
N6: (50.509,146.237,58.880)
N7: (51.605,143.388,58.778)
N9: (51.450,142.074,60.594)
O5': (52.892,138.046,58.678)
O3': (49.170,138.210,61.087)
Image (generated by PyMOL):