ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A409:A395

Extra

PDB:
ATOM 1 O3' U A 408 112.746 34.871 68.388 1.00 79.50 O
ATOM 2 P G A 409 112.200 35.006 69.888 1.00 85.21 P
ATOM 3 OP1 G A 409 112.750 33.925 70.741 1.00 79.56 O
ATOM 4 OP2 G A 409 110.731 35.186 69.783 1.00 77.24 O
ATOM 5 O5' G A 409 112.859 36.363 70.387 1.00 80.72 O
ATOM 6 C5' G A 409 112.302 37.085 71.467 1.00 85.93 C
ATOM 7 C4' G A 409 113.277 38.122 71.917 1.00 84.79 C
ATOM 8 O4' G A 409 114.439 37.450 72.436 1.00 85.44 O
ATOM 9 C3' G A 409 113.760 39.060 70.819 1.00 86.16 C
ATOM 10 O3' G A 409 113.086 40.324 70.788 1.00 90.92 O
ATOM 11 C2' G A 409 115.285 38.933 70.776 1.00 87.83 C
ATOM 12 O2' G A 409 115.938 40.188 70.748 1.00 83.21 O
ATOM 13 C1' G A 409 115.604 38.147 72.055 1.00 89.87 C
ATOM 14 N9 G A 409 116.665 37.154 71.899 1.00 91.91 N
ATOM 15 C8 G A 409 116.508 35.845 71.520 1.00 92.33 C
ATOM 16 N7 G A 409 117.631 35.183 71.489 1.00 91.71 N
ATOM 17 C5 G A 409 118.590 36.109 71.866 1.00 91.12 C
ATOM 18 C6 G A 409 119.988 35.969 72.012 1.00 88.67 C
ATOM 19 O6 G A 409 120.680 34.968 71.835 1.00 90.34 O
ATOM 20 N1 G A 409 120.583 37.158 72.405 1.00 90.92 N
ATOM 21 C2 G A 409 119.921 38.334 72.634 1.00 92.59 C
ATOM 22 N2 G A 409 120.671 39.376 73.005 1.00 95.25 N
ATOM 23 N3 G A 409 118.617 38.478 72.506 1.00 95.09 N
ATOM 24 C4 G A 409 118.016 37.333 72.119 1.00 93.91 C
ATOM 25 P U A 410 113.413 41.473 71.874 1.00 90.74 P
ATOM 26 OP1 U A 410 112.200 42.316 71.942 1.00 80.99 O
ATOM 27 OP2 U A 410 114.720 42.114 71.572 1.00 89.85 O
ATOM 28 O5' U A 410 113.471 40.720 73.282 1.00 90.78 O
TER

ATOM 1 O3' G B 394 123.514 39.438 74.022 1.00 99.90 O
ATOM 2 P A B 395 124.201 38.451 72.942 1.00 98.62 P
ATOM 3 OP1 A B 395 125.136 39.206 72.064 1.00106.40 O
ATOM 4 OP2 A B 395 123.100 37.678 72.335 1.00 92.79 O
ATOM 5 O5' A B 395 125.062 37.449 73.823 1.00 88.86 O
ATOM 6 C5' A B 395 124.800 37.297 75.205 1.00 86.59 C
ATOM 7 C4' A B 395 125.907 36.523 75.859 1.00 88.59 C
ATOM 8 O4' A B 395 125.487 36.282 77.218 1.00 94.89 O
ATOM 9 C3' A B 395 126.151 35.165 75.209 1.00 86.10 C
ATOM 10 O3' A B 395 127.433 35.261 74.587 1.00 85.32 O
ATOM 11 C2' A B 395 126.243 34.200 76.389 1.00 87.32 C
ATOM 12 O2' A B 395 127.567 34.082 76.855 1.00 85.31 O
ATOM 13 C1' A B 395 125.387 34.897 77.452 1.00 90.18 C
ATOM 14 N9 A B 395 123.959 34.557 77.456 1.00 96.23 N
ATOM 15 C8 A B 395 122.896 35.432 77.554 1.00 95.33 C
ATOM 16 N7 A B 395 121.725 34.853 77.466 1.00 95.72 N
ATOM 17 C5 A B 395 122.027 33.508 77.309 1.00 92.46 C
ATOM 18 C6 A B 395 121.220 32.377 77.135 1.00 88.96 C
ATOM 19 N6 A B 395 119.886 32.430 77.051 1.00 91.30 N
ATOM 20 N1 A B 395 121.829 31.179 77.034 1.00 88.36 N
ATOM 21 C2 A B 395 123.165 31.135 77.092 1.00 85.28 C
ATOM 22 N3 A B 395 124.037 32.131 77.229 1.00 87.32 N
ATOM 23 C4 A B 395 123.398 33.307 77.331 1.00 93.49 C
ATOM 24 P A B 396 127.662 34.709 73.099 1.00 82.12 P
ATOM 25 OP1 A B 396 129.080 34.973 72.735 1.00 81.60 O
ATOM 26 OP2 A B 396 126.567 35.230 72.244 1.00 71.80 O
ATOM 27 O5' A B 396 127.520 33.137 73.253 1.00 90.12 O
TER

Atoms:
OP1: (112.750,33.925,70.741)
OP2: (110.731,35.186,69.783)
C3': (113.760,39.060,70.819)
C1': (115.604,38.147,72.055)
C5': (112.302,37.085,71.467)
O6: (120.680,34.968,71.835)
O4': (114.439,37.450,72.436)
C8: (116.508,35.845,71.520)
C2: (119.921,38.334,72.634)
C6: (119.988,35.969,72.012)
C5: (118.590,36.109,71.866)
C4: (118.016,37.333,72.119)
P: (112.200,35.006,69.888)
C4': (113.277,38.122,71.917)
C2': (115.285,38.933,70.776)
O2': (115.938,40.188,70.748)
N1: (120.583,37.158,72.405)
N2: (120.671,39.376,73.005)
N3: (118.617,38.478,72.506)
N7: (117.631,35.183,71.489)
N9: (116.665,37.154,71.899)
O5': (112.859,36.363,70.387)
O3': (113.086,40.324,70.788)
OP1: (125.136,39.206,72.064)
OP2: (123.100,37.678,72.335)
C3': (126.151,35.165,75.209)
C1': (125.387,34.897,77.452)
C5': (124.800,37.297,75.205)
O4': (125.487,36.282,77.218)
C8: (122.896,35.432,77.554)
O2': (127.567,34.082,76.855)
C6: (121.220,32.377,77.135)
C5: (122.027,33.508,77.309)
C4: (123.398,33.307,77.331)
P: (124.201,38.451,72.942)
C4': (125.907,36.523,75.859)
C2': (126.243,34.200,76.389)
C2: (123.165,31.135,77.092)
N1: (121.829,31.179,77.034)
N3: (124.037,32.131,77.229)
N6: (119.886,32.430,77.051)
N7: (121.725,34.853,77.466)
N9: (123.959,34.557,77.456)
O5': (125.062,37.449,73.823)
O3': (127.433,35.261,74.587)
Image (generated by PyMOL):
PyMOL image
show in jmol