ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A464:A437

Extra

PDB:
ATOM 1 O3' G A 463 130.722 67.939 36.596 1.00 95.34 O
ATOM 2 P G A 464 130.149 67.729 38.088 1.00 97.67 P
ATOM 3 OP1 G A 464 130.335 66.271 38.349 1.00 96.09 O
ATOM 4 OP2 G A 464 128.793 68.332 38.225 1.00 98.70 O
ATOM 5 O5' G A 464 131.192 68.528 39.001 1.00 98.43 O
ATOM 6 C5' G A 464 130.855 68.901 40.349 1.00100.67 C
ATOM 7 C4' G A 464 130.445 70.350 40.390 1.00102.48 C
ATOM 8 O4' G A 464 129.100 70.460 40.932 1.00103.19 O
ATOM 9 C3' G A 464 131.325 71.299 41.209 1.00103.49 C
ATOM 10 O3' G A 464 131.381 72.554 40.498 1.00103.88 O
ATOM 11 C2' G A 464 130.514 71.458 42.494 1.00104.37 C
ATOM 12 O2' G A 464 130.736 72.651 43.212 1.00106.08 O
ATOM 13 C1' G A 464 129.102 71.455 41.925 1.00104.60 C
ATOM 14 N9 G A 464 127.985 71.258 42.839 1.00105.30 N
ATOM 15 C8 G A 464 127.969 70.603 44.045 1.00105.53 C
ATOM 16 N7 G A 464 126.802 70.643 44.632 1.00107.16 N
ATOM 17 C5 G A 464 126.000 71.364 43.754 1.00107.51 C
ATOM 18 C6 G A 464 124.623 71.744 43.843 1.00108.16 C
ATOM 19 O6 G A 464 123.809 71.521 44.759 1.00108.25 O
ATOM 20 N1 G A 464 124.221 72.460 42.719 1.00108.30 N
ATOM 21 C2 G A 464 125.029 72.779 41.654 1.00107.93 C
ATOM 22 N2 G A 464 124.460 73.471 40.660 1.00108.37 N
ATOM 23 N3 G A 464 126.301 72.443 41.565 1.00107.19 N
ATOM 24 C4 G A 464 126.717 71.741 42.640 1.00106.65 C
ATOM 25 P U A 465 132.299 73.766 41.040 1.00104.77 P
ATOM 26 OP1 U A 465 133.595 73.188 41.501 1.00105.04 O
ATOM 27 OP2 U A 465 131.490 74.608 41.960 1.00105.02 O
ATOM 28 O5' U A 465 132.581 74.636 39.746 1.00104.08 O
TER

ATOM 1 O3' G B 436 120.868 75.596 42.622 1.00102.74 O
ATOM 2 P A B 437 120.825 74.439 41.497 1.00102.02 P
ATOM 3 OP1 A B 437 119.523 73.719 41.660 1.00101.46 O
ATOM 4 OP2 A B 437 122.090 73.678 41.512 1.00100.29 O
ATOM 5 O5' A B 437 120.710 75.311 40.175 1.00100.88 O
ATOM 6 C5' A B 437 119.925 76.513 40.232 1.00 98.79 C
ATOM 7 C4' A B 437 120.142 77.397 39.031 1.00 96.47 C
ATOM 8 O4' A B 437 121.494 77.906 38.934 1.00 95.31 O
ATOM 9 C3' A B 437 119.896 76.839 37.648 1.00 94.56 C
ATOM 10 O3' A B 437 118.520 76.718 37.410 1.00 92.41 O
ATOM 11 C2' A B 437 120.500 77.938 36.776 1.00 94.71 C
ATOM 12 O2' A B 437 119.618 79.031 36.607 1.00 94.73 O
ATOM 13 C1' A B 437 121.671 78.427 37.632 1.00 93.96 C
ATOM 14 N9 A B 437 122.965 78.017 37.093 1.00 91.85 N
ATOM 15 C8 A B 437 123.802 76.999 37.472 1.00 91.03 C
ATOM 16 N7 A B 437 124.893 76.918 36.748 1.00 89.98 N
ATOM 17 C5 A B 437 124.764 77.956 35.836 1.00 89.84 C
ATOM 18 C6 A B 437 125.593 78.416 34.804 1.00 89.53 C
ATOM 19 N6 A B 437 126.778 77.880 34.519 1.00 89.67 N
ATOM 20 N1 A B 437 125.163 79.467 34.070 1.00 89.41 N
ATOM 21 C2 A B 437 123.985 80.020 34.374 1.00 88.80 C
ATOM 22 N3 A B 437 123.124 79.687 35.328 1.00 89.34 N
ATOM 23 C4 A B 437 123.580 78.634 36.032 1.00 90.43 C
ATOM 24 P C B 438 118.005 75.797 36.210 1.00 91.34 P
ATOM 25 OP1 C B 438 116.621 75.363 36.579 1.00 91.13 O
ATOM 26 OP2 C B 438 119.059 74.787 35.901 1.00 90.16 O
ATOM 27 O5' C B 438 117.881 76.821 35.004 1.00 90.75 O
TER

Atoms:
OP1: (130.335,66.271,38.349)
OP2: (128.793,68.332,38.225)
C3': (131.325,71.299,41.209)
C1': (129.102,71.455,41.925)
C5': (130.855,68.901,40.349)
O6: (123.809,71.521,44.759)
O4': (129.100,70.460,40.932)
C8: (127.969,70.603,44.045)
C2: (125.029,72.779,41.654)
C6: (124.623,71.744,43.843)
C5: (126.000,71.364,43.754)
C4: (126.717,71.741,42.640)
P: (130.149,67.729,38.088)
C4': (130.445,70.350,40.390)
C2': (130.514,71.458,42.494)
O2': (130.736,72.651,43.212)
N1: (124.221,72.460,42.719)
N2: (124.460,73.471,40.660)
N3: (126.301,72.443,41.565)
N7: (126.802,70.643,44.632)
N9: (127.985,71.258,42.839)
O5': (131.192,68.528,39.001)
O3': (131.381,72.554,40.498)
OP1: (119.523,73.719,41.660)
OP2: (122.090,73.678,41.512)
C3': (119.896,76.839,37.648)
C1': (121.671,78.427,37.632)
C5': (119.925,76.513,40.232)
O4': (121.494,77.906,38.934)
C8: (123.802,76.999,37.472)
O2': (119.618,79.031,36.607)
C6: (125.593,78.416,34.804)
C5: (124.764,77.956,35.836)
C4: (123.580,78.634,36.032)
P: (120.825,74.439,41.497)
C4': (120.142,77.397,39.031)
C2': (120.500,77.938,36.776)
C2: (123.985,80.020,34.374)
N1: (125.163,79.467,34.070)
N3: (123.124,79.687,35.328)
N6: (126.778,77.880,34.519)
N7: (124.893,76.918,36.748)
N9: (122.965,78.017,37.093)
O5': (120.710,75.311,40.175)
O3': (118.520,76.718,37.410)
Image (generated by PyMOL):
PyMOL image
show in jmol