ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0668:0653

Extra

PDB:
ATOM 1 O3' G A 667 37.386 94.598 22.246 1.00 40.29 O
ATOM 2 P G A 668 38.314 93.504 22.969 1.00 41.54 P
ATOM 3 OP1 G A 668 38.819 92.562 21.941 1.00 42.46 O
ATOM 4 OP2 G A 668 37.572 92.983 24.141 1.00 40.64 O
ATOM 5 O5' G A 668 39.591 94.315 23.466 1.00 44.99 O
ATOM 6 C5' G A 668 40.698 94.598 22.578 1.00 44.96 C
ATOM 7 C4' G A 668 41.843 95.209 23.353 1.00 46.44 C
ATOM 8 O4' G A 668 41.367 96.397 24.043 1.00 48.00 O
ATOM 9 C3' G A 668 42.427 94.330 24.451 1.00 45.26 C
ATOM 10 O3' G A 668 43.459 93.502 23.921 1.00 44.08 O
ATOM 11 C2' G A 668 43.007 95.359 25.412 1.00 46.23 C
ATOM 12 O2' G A 668 44.241 95.859 24.942 1.00 43.11 O
ATOM 13 C1' G A 668 41.970 96.484 25.323 1.00 48.28 C
ATOM 14 N9 G A 668 40.909 96.441 26.329 1.00 50.64 N
ATOM 15 C8 G A 668 39.692 95.815 26.211 1.00 50.44 C
ATOM 16 N7 G A 668 38.924 95.977 27.252 1.00 51.94 N
ATOM 17 C5 G A 668 39.677 96.751 28.122 1.00 52.98 C
ATOM 18 C6 G A 668 39.358 97.258 29.414 1.00 53.66 C
ATOM 19 O6 G A 668 38.310 97.115 30.067 1.00 52.92 O
ATOM 20 N1 G A 668 40.408 98.003 29.941 1.00 53.64 N
ATOM 21 C2 G A 668 41.606 98.237 29.311 1.00 53.39 C
ATOM 22 N2 G A 668 42.477 98.999 29.984 1.00 53.31 N
ATOM 23 N3 G A 668 41.921 97.766 28.111 1.00 52.81 N
ATOM 24 C4 G A 668 40.913 97.040 27.575 1.00 52.88 C
ATOM 25 P G A 669 43.267 91.906 23.852 1.00 44.80 P
ATOM 26 OP1 G A 669 43.890 91.452 22.583 1.00 42.81 O
ATOM 27 OP2 G A 669 41.834 91.596 24.121 1.00 42.62 O
ATOM 28 O5' G A 669 44.174 91.334 25.034 1.00 42.21 O
TER

ATOM 1 O3' U B 652 40.443 97.613 34.479 1.00 39.20 O
ATOM 2 P A B 653 40.981 99.003 33.882 1.00 38.78 P
ATOM 3 OP1 A B 653 40.696 100.046 34.894 1.00 39.09 O
ATOM 4 OP2 A B 653 40.450 99.154 32.502 1.00 39.05 O
ATOM 5 O5' A B 653 42.560 98.792 33.798 1.00 36.99 O
ATOM 6 C5' A B 653 43.354 98.768 34.994 1.00 36.40 C
ATOM 7 C4' A B 653 44.818 98.942 34.669 1.00 37.76 C
ATOM 8 O4' A B 653 45.388 97.720 34.143 1.00 38.71 O
ATOM 9 C3' A B 653 45.162 99.991 33.631 1.00 37.03 C
ATOM 10 O3' A B 653 45.148 101.283 34.200 1.00 36.21 O
ATOM 11 C2' A B 653 46.556 99.568 33.200 1.00 37.52 C
ATOM 12 O2' A B 653 47.551 99.956 34.123 1.00 37.09 O
ATOM 13 C1' A B 653 46.425 98.044 33.230 1.00 39.37 C
ATOM 14 N9 A B 653 46.094 97.450 31.936 1.00 41.13 N
ATOM 15 C8 A B 653 44.864 97.037 31.489 1.00 40.79 C
ATOM 16 N7 A B 653 44.895 96.473 30.307 1.00 42.93 N
ATOM 17 C5 A B 653 46.234 96.530 29.945 1.00 42.78 C
ATOM 18 C6 A B 653 46.925 96.075 28.811 1.00 42.74 C
ATOM 19 N6 A B 653 46.343 95.422 27.808 1.00 42.22 N
ATOM 20 N1 A B 653 48.254 96.307 28.749 1.00 42.73 N
ATOM 21 C2 A B 653 48.840 96.938 29.774 1.00 42.23 C
ATOM 22 N3 A B 653 48.300 97.394 30.902 1.00 40.33 N
ATOM 23 C4 A B 653 46.979 97.154 30.927 1.00 41.51 C
ATOM 24 P A B 654 44.569 102.510 33.356 1.00 38.69 P
ATOM 25 OP1 A B 654 44.412 103.635 34.308 1.00 36.30 O
ATOM 26 OP2 A B 654 43.394 102.039 32.582 1.00 38.49 O
ATOM 27 O5' A B 654 45.746 102.845 32.330 1.00 38.54 O
TER

Atoms:
OP1: (38.819,92.562,21.941)
OP2: (37.572,92.983,24.141)
C3': (42.427,94.330,24.451)
C1': (41.970,96.484,25.323)
C5': (40.698,94.598,22.578)
O6: (38.310,97.115,30.067)
O4': (41.367,96.397,24.043)
C8: (39.692,95.815,26.211)
C2: (41.606,98.237,29.311)
C6: (39.358,97.258,29.414)
C5: (39.677,96.751,28.122)
C4: (40.913,97.040,27.575)
P: (38.314,93.504,22.969)
C4': (41.843,95.209,23.353)
C2': (43.007,95.359,25.412)
O2': (44.241,95.859,24.942)
N1: (40.408,98.003,29.941)
N2: (42.477,98.999,29.984)
N3: (41.921,97.766,28.111)
N7: (38.924,95.977,27.252)
N9: (40.909,96.441,26.329)
O5': (39.591,94.315,23.466)
O3': (43.459,93.502,23.921)
OP1: (40.696,100.046,34.894)
OP2: (40.450,99.154,32.502)
C3': (45.162,99.991,33.631)
C1': (46.425,98.044,33.230)
C5': (43.354,98.768,34.994)
O4': (45.388,97.720,34.143)
C8: (44.864,97.037,31.489)
O2': (47.551,99.956,34.123)
C6: (46.925,96.075,28.811)
C5: (46.234,96.530,29.945)
C4: (46.979,97.154,30.927)
P: (40.981,99.003,33.882)
C4': (44.818,98.942,34.669)
C2': (46.556,99.568,33.200)
C2: (48.840,96.938,29.774)
N1: (48.254,96.307,28.749)
N3: (48.300,97.394,30.902)
N6: (46.343,95.422,27.808)
N7: (44.895,96.473,30.307)
N9: (46.094,97.450,31.936)
O5': (42.560,98.792,33.798)
O3': (45.148,101.283,34.200)
Image (generated by PyMOL):
PyMOL image
show in jmol