Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHD:A943:A1340
Extra
PDB:
ATOM 1 O3' C A 942 122.109-120.657-229.543 1.00171.37 O
ATOM 2 P G A 943 121.598-119.484-230.522 1.00165.38 P
ATOM 3 OP1 G A 943 121.674-120.005-231.912 1.00173.31 O
ATOM 4 OP2 G A 943 122.369-118.264-230.178 1.00177.86 O
ATOM 5 O5' G A 943 120.073-119.302-230.089 1.00169.44 O
ATOM 6 C5' G A 943 119.157-120.392-230.144 1.00168.06 C
ATOM 7 C4' G A 943 118.245-120.295-231.344 1.00169.42 C
ATOM 8 O4' G A 943 117.013-119.615-230.965 1.00169.14 O
ATOM 9 C3' G A 943 118.815-119.520-232.542 1.00168.48 C
ATOM 10 O3' G A 943 118.466-120.178-233.758 1.00163.98 O
ATOM 11 C2' G A 943 118.087-118.182-232.467 1.00169.91 C
ATOM 12 O2' G A 943 117.960-117.518-233.706 1.00169.44 O
ATOM 13 C1' G A 943 116.733-118.607-231.914 1.00171.17 C
ATOM 14 N9 G A 943 115.977-117.525-231.269 1.00181.19 N
ATOM 15 C8 G A 943 116.362-116.209-231.133 1.00181.10 C
ATOM 16 N7 G A 943 115.465-115.457-230.551 1.00183.55 N
ATOM 17 C5 G A 943 114.407-116.323-230.302 1.00186.01 C
ATOM 18 C6 G A 943 113.146-116.086-229.690 1.00185.62 C
ATOM 19 O6 G A 943 112.695-115.030-229.233 1.00186.07 O
ATOM 20 N1 G A 943 112.378-117.244-229.638 1.00185.06 N
ATOM 21 C2 G A 943 112.771-118.470-230.115 1.00185.44 C
ATOM 22 N2 G A 943 111.897-119.475-229.977 1.00187.52 N
ATOM 23 N3 G A 943 113.938-118.705-230.686 1.00186.25 N
ATOM 24 C4 G A 943 114.703-117.596-230.749 1.00184.66 C
ATOM 25 P C A 944 119.537-120.280-234.952 1.00167.97 P
ATOM 26 OP1 C A 944 120.168-118.945-235.096 1.00160.85 O
ATOM 27 OP2 C A 944 118.838-120.864-236.118 1.00160.27 O
ATOM 28 O5' C A 944 120.592-121.317-234.378 1.00150.78 O
TER
ATOM 1 O3' C B1339 107.312-118.556-228.143 1.00176.52 O
ATOM 2 P A B1340 108.250-118.975-229.374 1.00173.75 P
ATOM 3 OP1 A B1340 108.059-120.430-229.595 1.00179.60 O
ATOM 4 OP2 A B1340 109.613-118.473-229.072 1.00185.81 O
ATOM 5 O5' A B1340 107.628-118.150-230.588 1.00197.25 O
ATOM 6 C5' A B1340 107.823-116.741-230.694 1.00196.80 C
ATOM 7 C4' A B1340 107.921-116.303-232.134 1.00195.96 C
ATOM 8 O4' A B1340 108.707-117.281-232.868 1.00195.52 O
ATOM 9 C3' A B1340 106.589-116.200-232.873 1.00197.47 C
ATOM 10 O3' A B1340 106.694-115.214-233.899 1.00197.78 O
ATOM 11 C2' A B1340 106.467-117.576-233.511 1.00198.07 C
ATOM 12 O2' A B1340 105.609-117.630-234.632 1.00200.08 O
ATOM 13 C1' A B1340 107.919-117.860-233.892 1.00197.48 C
ATOM 14 N9 A B1340 108.246-119.285-233.967 1.00196.83 N
ATOM 15 C8 A B1340 109.066-120.001-233.131 1.00196.59 C
ATOM 16 N7 A B1340 109.163-121.269-233.448 1.00197.97 N
ATOM 17 C5 A B1340 108.353-121.394-234.568 1.00198.08 C
ATOM 18 C6 A B1340 108.029-122.493-235.382 1.00196.95 C
ATOM 19 N6 A B1340 108.505-123.723-235.182 1.00195.45 N
ATOM 20 N1 A B1340 107.190-122.279-236.420 1.00197.37 N
ATOM 21 C2 A B1340 106.713-121.044-236.618 1.00197.48 C
ATOM 22 N3 A B1340 106.943-119.932-235.924 1.00198.45 N
ATOM 23 C4 A B1340 107.782-120.179-234.901 1.00198.47 C
ATOM 24 P U B1341 106.154-113.721-233.654 1.00175.84 P
ATOM 25 OP1 U B1341 105.882-113.590-232.200 1.00189.99 O
ATOM 26 OP2 U B1341 105.040-113.496-234.610 1.00193.85 O
ATOM 27 O5' U B1341 107.410-112.823-234.059 1.00162.78 O
TER
ATOM 2 P G A 943 121.598-119.484-230.522 1.00165.38 P
ATOM 3 OP1 G A 943 121.674-120.005-231.912 1.00173.31 O
ATOM 4 OP2 G A 943 122.369-118.264-230.178 1.00177.86 O
ATOM 5 O5' G A 943 120.073-119.302-230.089 1.00169.44 O
ATOM 6 C5' G A 943 119.157-120.392-230.144 1.00168.06 C
ATOM 7 C4' G A 943 118.245-120.295-231.344 1.00169.42 C
ATOM 8 O4' G A 943 117.013-119.615-230.965 1.00169.14 O
ATOM 9 C3' G A 943 118.815-119.520-232.542 1.00168.48 C
ATOM 10 O3' G A 943 118.466-120.178-233.758 1.00163.98 O
ATOM 11 C2' G A 943 118.087-118.182-232.467 1.00169.91 C
ATOM 12 O2' G A 943 117.960-117.518-233.706 1.00169.44 O
ATOM 13 C1' G A 943 116.733-118.607-231.914 1.00171.17 C
ATOM 14 N9 G A 943 115.977-117.525-231.269 1.00181.19 N
ATOM 15 C8 G A 943 116.362-116.209-231.133 1.00181.10 C
ATOM 16 N7 G A 943 115.465-115.457-230.551 1.00183.55 N
ATOM 17 C5 G A 943 114.407-116.323-230.302 1.00186.01 C
ATOM 18 C6 G A 943 113.146-116.086-229.690 1.00185.62 C
ATOM 19 O6 G A 943 112.695-115.030-229.233 1.00186.07 O
ATOM 20 N1 G A 943 112.378-117.244-229.638 1.00185.06 N
ATOM 21 C2 G A 943 112.771-118.470-230.115 1.00185.44 C
ATOM 22 N2 G A 943 111.897-119.475-229.977 1.00187.52 N
ATOM 23 N3 G A 943 113.938-118.705-230.686 1.00186.25 N
ATOM 24 C4 G A 943 114.703-117.596-230.749 1.00184.66 C
ATOM 25 P C A 944 119.537-120.280-234.952 1.00167.97 P
ATOM 26 OP1 C A 944 120.168-118.945-235.096 1.00160.85 O
ATOM 27 OP2 C A 944 118.838-120.864-236.118 1.00160.27 O
ATOM 28 O5' C A 944 120.592-121.317-234.378 1.00150.78 O
TER
ATOM 1 O3' C B1339 107.312-118.556-228.143 1.00176.52 O
ATOM 2 P A B1340 108.250-118.975-229.374 1.00173.75 P
ATOM 3 OP1 A B1340 108.059-120.430-229.595 1.00179.60 O
ATOM 4 OP2 A B1340 109.613-118.473-229.072 1.00185.81 O
ATOM 5 O5' A B1340 107.628-118.150-230.588 1.00197.25 O
ATOM 6 C5' A B1340 107.823-116.741-230.694 1.00196.80 C
ATOM 7 C4' A B1340 107.921-116.303-232.134 1.00195.96 C
ATOM 8 O4' A B1340 108.707-117.281-232.868 1.00195.52 O
ATOM 9 C3' A B1340 106.589-116.200-232.873 1.00197.47 C
ATOM 10 O3' A B1340 106.694-115.214-233.899 1.00197.78 O
ATOM 11 C2' A B1340 106.467-117.576-233.511 1.00198.07 C
ATOM 12 O2' A B1340 105.609-117.630-234.632 1.00200.08 O
ATOM 13 C1' A B1340 107.919-117.860-233.892 1.00197.48 C
ATOM 14 N9 A B1340 108.246-119.285-233.967 1.00196.83 N
ATOM 15 C8 A B1340 109.066-120.001-233.131 1.00196.59 C
ATOM 16 N7 A B1340 109.163-121.269-233.448 1.00197.97 N
ATOM 17 C5 A B1340 108.353-121.394-234.568 1.00198.08 C
ATOM 18 C6 A B1340 108.029-122.493-235.382 1.00196.95 C
ATOM 19 N6 A B1340 108.505-123.723-235.182 1.00195.45 N
ATOM 20 N1 A B1340 107.190-122.279-236.420 1.00197.37 N
ATOM 21 C2 A B1340 106.713-121.044-236.618 1.00197.48 C
ATOM 22 N3 A B1340 106.943-119.932-235.924 1.00198.45 N
ATOM 23 C4 A B1340 107.782-120.179-234.901 1.00198.47 C
ATOM 24 P U B1341 106.154-113.721-233.654 1.00175.84 P
ATOM 25 OP1 U B1341 105.882-113.590-232.200 1.00189.99 O
ATOM 26 OP2 U B1341 105.040-113.496-234.610 1.00193.85 O
ATOM 27 O5' U B1341 107.410-112.823-234.059 1.00162.78 O
TER
Atoms:
OP1: (121.674,-120.005,-231.912)
OP2: (122.369,-118.264,-230.178)
C3': (118.815,-119.520,-232.542)
C1': (116.733,-118.607,-231.914)
C5': (119.157,-120.392,-230.144)
O6: (112.695,-115.030,-229.233)
O4': (117.013,-119.615,-230.965)
C8: (116.362,-116.209,-231.133)
C2: (112.771,-118.470,-230.115)
C6: (113.146,-116.086,-229.690)
C5: (114.407,-116.323,-230.302)
C4: (114.703,-117.596,-230.749)
P: (121.598,-119.484,-230.522)
C4': (118.245,-120.295,-231.344)
C2': (118.087,-118.182,-232.467)
O2': (117.960,-117.518,-233.706)
N1: (112.378,-117.244,-229.638)
N2: (111.897,-119.475,-229.977)
N3: (113.938,-118.705,-230.686)
N7: (115.465,-115.457,-230.551)
N9: (115.977,-117.525,-231.269)
O5': (120.073,-119.302,-230.089)
O3': (118.466,-120.178,-233.758)
OP2: (122.369,-118.264,-230.178)
C3': (118.815,-119.520,-232.542)
C1': (116.733,-118.607,-231.914)
C5': (119.157,-120.392,-230.144)
O6: (112.695,-115.030,-229.233)
O4': (117.013,-119.615,-230.965)
C8: (116.362,-116.209,-231.133)
C2: (112.771,-118.470,-230.115)
C6: (113.146,-116.086,-229.690)
C5: (114.407,-116.323,-230.302)
C4: (114.703,-117.596,-230.749)
P: (121.598,-119.484,-230.522)
C4': (118.245,-120.295,-231.344)
C2': (118.087,-118.182,-232.467)
O2': (117.960,-117.518,-233.706)
N1: (112.378,-117.244,-229.638)
N2: (111.897,-119.475,-229.977)
N3: (113.938,-118.705,-230.686)
N7: (115.465,-115.457,-230.551)
N9: (115.977,-117.525,-231.269)
O5': (120.073,-119.302,-230.089)
O3': (118.466,-120.178,-233.758)
OP1: (108.059,-120.430,-229.595)
OP2: (109.613,-118.473,-229.072)
C3': (106.589,-116.200,-232.873)
C1': (107.919,-117.860,-233.892)
C5': (107.823,-116.741,-230.694)
O4': (108.707,-117.281,-232.868)
C8: (109.066,-120.001,-233.131)
O2': (105.609,-117.630,-234.632)
C6: (108.029,-122.493,-235.382)
C5: (108.353,-121.394,-234.568)
C4: (107.782,-120.179,-234.901)
P: (108.250,-118.975,-229.374)
C4': (107.921,-116.303,-232.134)
C2': (106.467,-117.576,-233.511)
C2: (106.713,-121.044,-236.618)
N1: (107.190,-122.279,-236.420)
N3: (106.943,-119.932,-235.924)
N6: (108.505,-123.723,-235.182)
N7: (109.163,-121.269,-233.448)
N9: (108.246,-119.285,-233.967)
O5': (107.628,-118.150,-230.588)
O3': (106.694,-115.214,-233.899)
OP2: (109.613,-118.473,-229.072)
C3': (106.589,-116.200,-232.873)
C1': (107.919,-117.860,-233.892)
C5': (107.823,-116.741,-230.694)
O4': (108.707,-117.281,-232.868)
C8: (109.066,-120.001,-233.131)
O2': (105.609,-117.630,-234.632)
C6: (108.029,-122.493,-235.382)
C5: (108.353,-121.394,-234.568)
C4: (107.782,-120.179,-234.901)
P: (108.250,-118.975,-229.374)
C4': (107.921,-116.303,-232.134)
C2': (106.467,-117.576,-233.511)
C2: (106.713,-121.044,-236.618)
N1: (107.190,-122.279,-236.420)
N3: (106.943,-119.932,-235.924)
N6: (108.505,-123.723,-235.182)
N7: (109.163,-121.269,-233.448)
N9: (108.246,-119.285,-233.967)
O5': (107.628,-118.150,-230.588)
O3': (106.694,-115.214,-233.899)
Image (generated by PyMOL):