ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1917:A1956

Extra

PDB:
ATOM 1 O3' G A1916 116.837 104.517 101.460 1.00 64.68 O
ATOM 2 P G A1917 117.635 105.891 101.781 1.00 64.02 P
ATOM 3 OP1 G A1917 119.035 105.764 101.298 1.00 63.22 O
ATOM 4 OP2 G A1917 117.382 106.267 103.195 1.00 62.11 O
ATOM 5 O5' G A1917 116.842 106.957 100.899 1.00 65.61 O
ATOM 6 C5' G A1917 117.514 108.036 100.239 1.00 65.73 C
ATOM 7 C4' G A1917 116.945 109.378 100.674 1.00 66.41 C
ATOM 8 O4' G A1917 115.715 109.700 99.965 1.00 67.24 O
ATOM 9 C3' G A1917 116.628 109.579 102.165 1.00 66.83 C
ATOM 10 O3' G A1917 116.979 110.932 102.507 1.00 66.90 O
ATOM 11 C2' G A1917 115.108 109.524 102.173 1.00 66.96 C
ATOM 12 O2' G A1917 114.503 110.185 103.257 1.00 67.68 O
ATOM 13 C1' G A1917 114.836 110.292 100.889 1.00 67.30 C
ATOM 14 N9 G A1917 113.476 110.387 100.360 1.00 67.46 N
ATOM 15 C8 G A1917 112.377 109.629 100.691 1.00 68.00 C
ATOM 16 N7 G A1917 111.283 110.037 100.109 1.00 68.48 N
ATOM 17 C5 G A1917 111.689 111.116 99.332 1.00 68.32 C
ATOM 18 C6 G A1917 110.941 111.977 98.483 1.00 69.35 C
ATOM 19 O6 G A1917 109.711 111.990 98.279 1.00 71.14 O
ATOM 20 N1 G A1917 111.763 112.907 97.850 1.00 67.83 N
ATOM 21 C2 G A1917 113.118 113.005 98.026 1.00 66.22 C
ATOM 22 N2 G A1917 113.747 113.919 97.291 1.00 63.99 N
ATOM 23 N3 G A1917 113.809 112.247 98.848 1.00 66.51 N
ATOM 24 C4 G A1917 113.040 111.325 99.457 1.00 67.16 C
ATOM 25 P U A1918 117.074 111.412 104.052 1.00 67.22 P
ATOM 26 OP1 U A1918 117.259 110.245 104.951 1.00 67.32 O
ATOM 27 OP2 U A1918 115.969 112.371 104.336 1.00 66.45 O
ATOM 28 O5' U A1918 118.448 112.214 104.047 1.00 66.58 O
TER

ATOM 1 O3' G B1955 111.000 117.513 96.536 1.00 53.20 O
ATOM 2 P A B1956 111.191 116.341 95.444 1.00 54.63 P
ATOM 3 OP1 A B1956 110.770 116.846 94.113 1.00 54.05 O
ATOM 4 OP2 A B1956 110.532 115.139 96.010 1.00 55.64 O
ATOM 5 O5' A B1956 112.764 116.079 95.379 1.00 52.17 O
ATOM 6 C5' A B1956 113.557 116.659 94.330 1.00 51.11 C
ATOM 7 C4' A B1956 113.682 118.139 94.569 1.00 48.68 C
ATOM 8 O4' A B1956 114.113 118.355 95.934 1.00 47.89 O
ATOM 9 C3' A B1956 114.661 118.901 93.693 1.00 47.66 C
ATOM 10 O3' A B1956 114.050 119.402 92.498 1.00 46.44 O
ATOM 11 C2' A B1956 115.054 120.072 94.581 1.00 47.32 C
ATOM 12 O2' A B1956 114.130 121.131 94.484 1.00 45.93 O
ATOM 13 C1' A B1956 114.981 119.464 95.982 1.00 48.58 C
ATOM 14 N9 A B1956 116.270 119.028 96.517 1.00 50.41 N
ATOM 15 C8 A B1956 116.718 117.755 96.791 1.00 51.33 C
ATOM 16 N7 A B1956 117.921 117.718 97.311 1.00 52.52 N
ATOM 17 C5 A B1956 118.297 119.053 97.373 1.00 52.57 C
ATOM 18 C6 A B1956 119.464 119.687 97.837 1.00 52.18 C
ATOM 19 N6 A B1956 120.491 119.039 98.375 1.00 52.77 N
ATOM 20 N1 A B1956 119.531 121.029 97.739 1.00 51.90 N
ATOM 21 C2 A B1956 118.485 121.686 97.228 1.00 52.13 C
ATOM 22 N3 A B1956 117.327 121.210 96.776 1.00 52.94 N
ATOM 23 C4 A B1956 117.295 119.868 96.875 1.00 52.31 C
ATOM 24 P A B1957 114.574 118.914 91.054 1.00 47.18 P
ATOM 25 OP1 A B1957 113.688 117.794 90.718 1.00 47.99 O
ATOM 26 OP2 A B1957 116.047 118.694 91.042 1.00 49.99 O
ATOM 27 O5' A B1957 114.211 120.117 90.072 1.00 47.06 O
TER

Atoms:
OP1: (119.035,105.764,101.298)
OP2: (117.382,106.267,103.195)
C3': (116.628,109.579,102.165)
C1': (114.836,110.292,100.889)
C5': (117.514,108.036,100.239)
O6: (109.711,111.990,98.279)
O4': (115.715,109.700,99.965)
C8: (112.377,109.629,100.691)
C2: (113.118,113.005,98.026)
C6: (110.941,111.977,98.483)
C5: (111.689,111.116,99.332)
C4: (113.040,111.325,99.457)
P: (117.635,105.891,101.781)
C4': (116.945,109.378,100.674)
C2': (115.108,109.524,102.173)
O2': (114.503,110.185,103.257)
N1: (111.763,112.907,97.850)
N2: (113.747,113.919,97.291)
N3: (113.809,112.247,98.848)
N7: (111.283,110.037,100.109)
N9: (113.476,110.387,100.360)
O5': (116.842,106.957,100.899)
O3': (116.979,110.932,102.507)
OP1: (110.770,116.846,94.113)
OP2: (110.532,115.139,96.010)
C3': (114.661,118.901,93.693)
C1': (114.981,119.464,95.982)
C5': (113.557,116.659,94.330)
O4': (114.113,118.355,95.934)
C8: (116.718,117.755,96.791)
O2': (114.130,121.131,94.484)
C6: (119.464,119.687,97.837)
C5: (118.297,119.053,97.373)
C4: (117.295,119.868,96.875)
P: (111.191,116.341,95.444)
C4': (113.682,118.139,94.569)
C2': (115.054,120.072,94.581)
C2: (118.485,121.686,97.228)
N1: (119.531,121.029,97.739)
N3: (117.327,121.210,96.776)
N6: (120.491,119.039,98.375)
N7: (117.921,117.718,97.311)
N9: (116.270,119.028,96.517)
O5': (112.764,116.079,95.379)
O3': (114.050,119.402,92.498)
Image (generated by PyMOL):
PyMOL image
show in jmol