Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1357:A1360
Extra
PDB:
ATOM 1 O3' C A1356 -55.146 -26.246 56.066 1.00 0.06 O
ATOM 2 P G A1357 -56.031 -27.172 57.024 1.00 0.01 P
ATOM 3 OP1 G A1357 -57.386 -26.638 57.005 1.00 0.01 O
ATOM 4 OP2 G A1357 -55.340 -27.282 58.308 1.00 0.01 O
ATOM 5 O5' G A1357 -55.996 -28.550 56.275 1.00 0.01 O
ATOM 6 C5' G A1357 -56.498 -28.647 54.955 1.00 0.01 C
ATOM 7 C4' G A1357 -56.309 -30.022 54.410 1.00 0.01 C
ATOM 8 O4' G A1357 -54.895 -30.302 54.324 1.00 0.01 O
ATOM 9 C3' G A1357 -56.847 -31.127 55.276 1.00 0.01 C
ATOM 10 O3' G A1357 -58.245 -31.304 55.140 1.00 0.01 O
ATOM 11 C2' G A1357 -56.016 -32.318 54.839 1.00 0.01 C
ATOM 12 O2' G A1357 -56.523 -32.894 53.655 1.00 0.01 O
ATOM 13 C1' G A1357 -54.668 -31.661 54.525 1.00 0.01 C
ATOM 14 N9 G A1357 -53.738 -31.824 55.636 1.00 0.10 N
ATOM 15 C8 G A1357 -53.335 -30.938 56.579 1.00 0.10 C
ATOM 16 N7 G A1357 -52.556 -31.521 57.459 1.00 0.10 N
ATOM 17 C5 G A1357 -52.473 -32.861 57.091 1.00 0.10 C
ATOM 18 C6 G A1357 -51.785 -33.982 57.651 1.00 0.10 C
ATOM 19 O6 G A1357 -51.053 -34.077 58.646 1.00 0.10 O
ATOM 20 N1 G A1357 -51.999 -35.139 56.915 1.00 0.10 N
ATOM 21 C2 G A1357 -52.766 -35.214 55.798 1.00 0.10 C
ATOM 22 N2 G A1357 -52.823 -36.413 55.267 1.00 0.10 N
ATOM 23 N3 G A1357 -53.419 -34.212 55.247 1.00 0.10 N
ATOM 24 C4 G A1357 -53.217 -33.061 55.953 1.00 0.10 C
ATOM 25 P A A1358 -59.150 -31.604 56.438 1.00 0.01 P
ATOM 26 OP1 A A1358 -60.413 -30.861 56.272 1.00 0.01 O
ATOM 27 OP2 A A1358 -58.318 -31.349 57.623 1.00 0.01 O
ATOM 28 O5' A A1358 -59.423 -33.154 56.323 1.00 0.01 O
TER
ATOM 1 O3' A B1359 -52.601 -39.677 58.565 1.00 0.01 O
ATOM 2 P A B1360 -51.355 -39.622 57.578 1.00 0.01 P
ATOM 3 OP1 A B1360 -50.133 -39.940 58.375 1.00 0.01 O
ATOM 4 OP2 A B1360 -51.428 -38.329 56.855 1.00 0.01 O
ATOM 5 O5' A B1360 -51.660 -40.808 56.590 1.00 0.01 O
ATOM 6 C5' A B1360 -50.605 -41.497 55.959 1.00 0.01 C
ATOM 7 C4' A B1360 -51.091 -42.171 54.730 1.00 0.01 C
ATOM 8 O4' A B1360 -52.486 -41.877 54.570 1.00 0.01 O
ATOM 9 C3' A B1360 -50.490 -41.687 53.442 1.00 0.01 C
ATOM 10 O3' A B1360 -49.232 -42.256 53.180 1.00 0.01 O
ATOM 11 C2' A B1360 -51.550 -42.083 52.439 1.00 0.01 C
ATOM 12 O2' A B1360 -51.549 -43.484 52.235 1.00 0.01 O
ATOM 13 C1' A B1360 -52.791 -41.733 53.203 1.00 0.01 C
ATOM 14 N9 A B1360 -53.204 -40.356 52.945 1.00 0.01 N
ATOM 15 C8 A B1360 -53.261 -39.302 53.788 1.00 0.01 C
ATOM 16 N7 A B1360 -53.693 -38.214 53.225 1.00 0.01 N
ATOM 17 C5 A B1360 -53.938 -38.588 51.931 1.00 0.01 C
ATOM 18 C6 A B1360 -54.410 -37.869 50.836 1.00 0.01 C
ATOM 19 N6 A B1360 -54.707 -36.579 50.922 1.00 0.01 N
ATOM 20 N1 A B1360 -54.553 -38.529 49.672 1.00 0.01 N
ATOM 21 C2 A B1360 -54.236 -39.826 49.641 1.00 0.01 C
ATOM 22 N3 A B1360 -53.771 -40.614 50.613 1.00 0.01 N
ATOM 23 C4 A B1360 -53.649 -39.915 51.745 1.00 0.01 C
ATOM 24 P G B1361 -47.918 -41.351 53.203 1.00 0.01 P
ATOM 25 OP1 G B1361 -46.848 -42.142 52.544 1.00 0.01 O
ATOM 26 OP2 G B1361 -47.722 -40.934 54.609 1.00 0.01 O
ATOM 27 O5' G B1361 -48.316 -40.082 52.310 1.00 0.01 O
TER
ATOM 2 P G A1357 -56.031 -27.172 57.024 1.00 0.01 P
ATOM 3 OP1 G A1357 -57.386 -26.638 57.005 1.00 0.01 O
ATOM 4 OP2 G A1357 -55.340 -27.282 58.308 1.00 0.01 O
ATOM 5 O5' G A1357 -55.996 -28.550 56.275 1.00 0.01 O
ATOM 6 C5' G A1357 -56.498 -28.647 54.955 1.00 0.01 C
ATOM 7 C4' G A1357 -56.309 -30.022 54.410 1.00 0.01 C
ATOM 8 O4' G A1357 -54.895 -30.302 54.324 1.00 0.01 O
ATOM 9 C3' G A1357 -56.847 -31.127 55.276 1.00 0.01 C
ATOM 10 O3' G A1357 -58.245 -31.304 55.140 1.00 0.01 O
ATOM 11 C2' G A1357 -56.016 -32.318 54.839 1.00 0.01 C
ATOM 12 O2' G A1357 -56.523 -32.894 53.655 1.00 0.01 O
ATOM 13 C1' G A1357 -54.668 -31.661 54.525 1.00 0.01 C
ATOM 14 N9 G A1357 -53.738 -31.824 55.636 1.00 0.10 N
ATOM 15 C8 G A1357 -53.335 -30.938 56.579 1.00 0.10 C
ATOM 16 N7 G A1357 -52.556 -31.521 57.459 1.00 0.10 N
ATOM 17 C5 G A1357 -52.473 -32.861 57.091 1.00 0.10 C
ATOM 18 C6 G A1357 -51.785 -33.982 57.651 1.00 0.10 C
ATOM 19 O6 G A1357 -51.053 -34.077 58.646 1.00 0.10 O
ATOM 20 N1 G A1357 -51.999 -35.139 56.915 1.00 0.10 N
ATOM 21 C2 G A1357 -52.766 -35.214 55.798 1.00 0.10 C
ATOM 22 N2 G A1357 -52.823 -36.413 55.267 1.00 0.10 N
ATOM 23 N3 G A1357 -53.419 -34.212 55.247 1.00 0.10 N
ATOM 24 C4 G A1357 -53.217 -33.061 55.953 1.00 0.10 C
ATOM 25 P A A1358 -59.150 -31.604 56.438 1.00 0.01 P
ATOM 26 OP1 A A1358 -60.413 -30.861 56.272 1.00 0.01 O
ATOM 27 OP2 A A1358 -58.318 -31.349 57.623 1.00 0.01 O
ATOM 28 O5' A A1358 -59.423 -33.154 56.323 1.00 0.01 O
TER
ATOM 1 O3' A B1359 -52.601 -39.677 58.565 1.00 0.01 O
ATOM 2 P A B1360 -51.355 -39.622 57.578 1.00 0.01 P
ATOM 3 OP1 A B1360 -50.133 -39.940 58.375 1.00 0.01 O
ATOM 4 OP2 A B1360 -51.428 -38.329 56.855 1.00 0.01 O
ATOM 5 O5' A B1360 -51.660 -40.808 56.590 1.00 0.01 O
ATOM 6 C5' A B1360 -50.605 -41.497 55.959 1.00 0.01 C
ATOM 7 C4' A B1360 -51.091 -42.171 54.730 1.00 0.01 C
ATOM 8 O4' A B1360 -52.486 -41.877 54.570 1.00 0.01 O
ATOM 9 C3' A B1360 -50.490 -41.687 53.442 1.00 0.01 C
ATOM 10 O3' A B1360 -49.232 -42.256 53.180 1.00 0.01 O
ATOM 11 C2' A B1360 -51.550 -42.083 52.439 1.00 0.01 C
ATOM 12 O2' A B1360 -51.549 -43.484 52.235 1.00 0.01 O
ATOM 13 C1' A B1360 -52.791 -41.733 53.203 1.00 0.01 C
ATOM 14 N9 A B1360 -53.204 -40.356 52.945 1.00 0.01 N
ATOM 15 C8 A B1360 -53.261 -39.302 53.788 1.00 0.01 C
ATOM 16 N7 A B1360 -53.693 -38.214 53.225 1.00 0.01 N
ATOM 17 C5 A B1360 -53.938 -38.588 51.931 1.00 0.01 C
ATOM 18 C6 A B1360 -54.410 -37.869 50.836 1.00 0.01 C
ATOM 19 N6 A B1360 -54.707 -36.579 50.922 1.00 0.01 N
ATOM 20 N1 A B1360 -54.553 -38.529 49.672 1.00 0.01 N
ATOM 21 C2 A B1360 -54.236 -39.826 49.641 1.00 0.01 C
ATOM 22 N3 A B1360 -53.771 -40.614 50.613 1.00 0.01 N
ATOM 23 C4 A B1360 -53.649 -39.915 51.745 1.00 0.01 C
ATOM 24 P G B1361 -47.918 -41.351 53.203 1.00 0.01 P
ATOM 25 OP1 G B1361 -46.848 -42.142 52.544 1.00 0.01 O
ATOM 26 OP2 G B1361 -47.722 -40.934 54.609 1.00 0.01 O
ATOM 27 O5' G B1361 -48.316 -40.082 52.310 1.00 0.01 O
TER
Atoms:
OP1: (-57.386,-26.638,57.005)
OP2: (-55.340,-27.282,58.308)
C3': (-56.847,-31.127,55.276)
C1': (-54.668,-31.661,54.525)
C5': (-56.498,-28.647,54.955)
O6: (-51.053,-34.077,58.646)
O4': (-54.895,-30.302,54.324)
C8: (-53.335,-30.938,56.579)
C2: (-52.766,-35.214,55.798)
C6: (-51.785,-33.982,57.651)
C5: (-52.473,-32.861,57.091)
C4: (-53.217,-33.061,55.953)
P: (-56.031,-27.172,57.024)
C4': (-56.309,-30.022,54.410)
C2': (-56.016,-32.318,54.839)
O2': (-56.523,-32.894,53.655)
N1: (-51.999,-35.139,56.915)
N2: (-52.823,-36.413,55.267)
N3: (-53.419,-34.212,55.247)
N7: (-52.556,-31.521,57.459)
N9: (-53.738,-31.824,55.636)
O5': (-55.996,-28.550,56.275)
O3': (-58.245,-31.304,55.140)
OP2: (-55.340,-27.282,58.308)
C3': (-56.847,-31.127,55.276)
C1': (-54.668,-31.661,54.525)
C5': (-56.498,-28.647,54.955)
O6: (-51.053,-34.077,58.646)
O4': (-54.895,-30.302,54.324)
C8: (-53.335,-30.938,56.579)
C2: (-52.766,-35.214,55.798)
C6: (-51.785,-33.982,57.651)
C5: (-52.473,-32.861,57.091)
C4: (-53.217,-33.061,55.953)
P: (-56.031,-27.172,57.024)
C4': (-56.309,-30.022,54.410)
C2': (-56.016,-32.318,54.839)
O2': (-56.523,-32.894,53.655)
N1: (-51.999,-35.139,56.915)
N2: (-52.823,-36.413,55.267)
N3: (-53.419,-34.212,55.247)
N7: (-52.556,-31.521,57.459)
N9: (-53.738,-31.824,55.636)
O5': (-55.996,-28.550,56.275)
O3': (-58.245,-31.304,55.140)
OP1: (-50.133,-39.940,58.375)
OP2: (-51.428,-38.329,56.855)
C3': (-50.490,-41.687,53.442)
C1': (-52.791,-41.733,53.203)
C5': (-50.605,-41.497,55.959)
O4': (-52.486,-41.877,54.570)
C8: (-53.261,-39.302,53.788)
O2': (-51.549,-43.484,52.235)
C6: (-54.410,-37.869,50.836)
C5: (-53.938,-38.588,51.931)
C4: (-53.649,-39.915,51.745)
P: (-51.355,-39.622,57.578)
C4': (-51.091,-42.171,54.730)
C2': (-51.550,-42.083,52.439)
C2: (-54.236,-39.826,49.641)
N1: (-54.553,-38.529,49.672)
N3: (-53.771,-40.614,50.613)
N6: (-54.707,-36.579,50.922)
N7: (-53.693,-38.214,53.225)
N9: (-53.204,-40.356,52.945)
O5': (-51.660,-40.808,56.590)
O3': (-49.232,-42.256,53.180)
OP2: (-51.428,-38.329,56.855)
C3': (-50.490,-41.687,53.442)
C1': (-52.791,-41.733,53.203)
C5': (-50.605,-41.497,55.959)
O4': (-52.486,-41.877,54.570)
C8: (-53.261,-39.302,53.788)
O2': (-51.549,-43.484,52.235)
C6: (-54.410,-37.869,50.836)
C5: (-53.938,-38.588,51.931)
C4: (-53.649,-39.915,51.745)
P: (-51.355,-39.622,57.578)
C4': (-51.091,-42.171,54.730)
C2': (-51.550,-42.083,52.439)
C2: (-54.236,-39.826,49.641)
N1: (-54.553,-38.529,49.672)
N3: (-53.771,-40.614,50.613)
N6: (-54.707,-36.579,50.922)
N7: (-53.693,-38.214,53.225)
N9: (-53.204,-40.356,52.945)
O5': (-51.660,-40.808,56.590)
O3': (-49.232,-42.256,53.180)
Image (generated by PyMOL):