ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0940:0972

Extra

PDB:
ATOM 1 O3' G A 939 54.087 63.378 99.695 1.00 41.10 O
ATOM 2 P G A 940 55.678 63.410 99.836 1.00 42.28 P
ATOM 3 OP1 G A 940 56.243 63.904 98.554 1.00 42.28 O
ATOM 4 OP2 G A 940 56.134 62.103 100.380 1.00 42.45 O
ATOM 5 O5' G A 940 55.892 64.539 100.929 1.00 44.75 O
ATOM 6 C5' G A 940 56.814 64.363 102.000 1.00 46.48 C
ATOM 7 C4' G A 940 56.188 64.817 103.289 1.00 47.00 C
ATOM 8 O4' G A 940 54.913 64.146 103.461 1.00 46.99 O
ATOM 9 C3' G A 940 57.007 64.492 104.526 1.00 47.79 C
ATOM 10 O3' G A 940 56.716 65.461 105.525 1.00 46.26 O
ATOM 11 C2' G A 940 56.442 63.139 104.930 1.00 48.53 C
ATOM 12 O2' G A 940 56.669 62.886 106.298 1.00 51.82 O
ATOM 13 C1' G A 940 54.957 63.339 104.620 1.00 49.35 C
ATOM 14 N9 G A 940 54.195 62.128 104.336 1.00 50.91 N
ATOM 15 C8 G A 940 54.473 61.187 103.376 1.00 52.43 C
ATOM 16 N7 G A 940 53.574 60.244 103.308 1.00 53.80 N
ATOM 17 C5 G A 940 52.653 60.572 104.294 1.00 54.22 C
ATOM 18 C6 G A 940 51.449 59.920 104.682 1.00 55.23 C
ATOM 19 O6 G A 940 50.938 58.893 104.214 1.00 57.23 O
ATOM 20 N1 G A 940 50.821 60.589 105.726 1.00 54.65 N
ATOM 21 C2 G A 940 51.281 61.733 106.318 1.00 53.07 C
ATOM 22 N2 G A 940 50.526 62.213 107.310 1.00 52.06 N
ATOM 23 N3 G A 940 52.396 62.355 105.965 1.00 52.78 N
ATOM 24 C4 G A 940 53.028 61.722 104.950 1.00 52.81 C
ATOM 25 P U A 941 57.446 66.891 105.486 1.00 45.48 P
ATOM 26 OP1 U A 941 57.690 67.241 104.058 1.00 42.95 O
ATOM 27 OP2 U A 941 58.585 66.876 106.439 1.00 46.58 O
ATOM 28 O5' U A 941 56.348 67.886 106.063 1.00 41.43 O
TER

ATOM 1 O3' A B 971 47.732 59.737 109.751 1.00 40.88 O
ATOM 2 P A B 972 47.510 59.706 108.165 1.00 40.94 P
ATOM 3 OP1 A B 972 46.142 59.200 107.908 1.00 43.49 O
ATOM 4 OP2 A B 972 48.673 59.028 107.536 1.00 39.76 O
ATOM 5 O5' A B 972 47.552 61.245 107.777 1.00 40.67 O
ATOM 6 C5' A B 972 46.338 61.997 107.619 1.00 38.13 C
ATOM 7 C4' A B 972 45.790 62.405 108.964 1.00 36.16 C
ATOM 8 O4' A B 972 46.815 63.059 109.751 1.00 37.55 O
ATOM 9 C3' A B 972 44.688 63.436 108.868 1.00 35.42 C
ATOM 10 O3' A B 972 43.458 62.825 108.561 1.00 36.78 O
ATOM 11 C2' A B 972 44.746 64.109 110.227 1.00 35.14 C
ATOM 12 O2' A B 972 44.148 63.356 111.260 1.00 33.37 O
ATOM 13 C1' A B 972 46.258 64.165 110.445 1.00 36.76 C
ATOM 14 N9 A B 972 46.864 65.382 109.901 1.00 38.64 N
ATOM 15 C8 A B 972 47.843 65.468 108.942 1.00 38.19 C
ATOM 16 N7 A B 972 48.199 66.694 108.658 1.00 39.70 N
ATOM 17 C5 A B 972 47.401 67.476 109.486 1.00 40.80 C
ATOM 18 C6 A B 972 47.304 68.871 109.674 1.00 40.96 C
ATOM 19 N6 A B 972 48.056 69.763 109.023 1.00 40.85 N
ATOM 20 N1 A B 972 46.402 69.323 110.571 1.00 41.50 N
ATOM 21 C2 A B 972 45.661 68.432 111.237 1.00 42.08 C
ATOM 22 N3 A B 972 45.666 67.103 111.158 1.00 42.99 N
ATOM 23 C4 A B 972 46.569 66.682 110.252 1.00 40.84 C
ATOM 24 P A B 973 42.729 63.189 107.187 1.00 36.70 P
ATOM 25 OP1 A B 973 41.543 62.304 107.050 1.00 36.61 O
ATOM 26 OP2 A B 973 43.757 63.189 106.122 1.00 35.05 O
ATOM 27 O5' A B 973 42.242 64.686 107.448 1.00 36.84 O
TER

Atoms:
OP1: (56.243,63.904,98.554)
OP2: (56.134,62.103,100.380)
C3': (57.007,64.492,104.526)
C1': (54.957,63.339,104.620)
C5': (56.814,64.363,102.000)
O6: (50.938,58.893,104.214)
O4': (54.913,64.146,103.461)
C8: (54.473,61.187,103.376)
C2: (51.281,61.733,106.318)
C6: (51.449,59.920,104.682)
C5: (52.653,60.572,104.294)
C4: (53.028,61.722,104.950)
P: (55.678,63.410,99.836)
C4': (56.188,64.817,103.289)
C2': (56.442,63.139,104.930)
O2': (56.669,62.886,106.298)
N1: (50.821,60.589,105.726)
N2: (50.526,62.213,107.310)
N3: (52.396,62.355,105.965)
N7: (53.574,60.244,103.308)
N9: (54.195,62.128,104.336)
O5': (55.892,64.539,100.929)
O3': (56.716,65.461,105.525)
OP1: (46.142,59.200,107.908)
OP2: (48.673,59.028,107.536)
C3': (44.688,63.436,108.868)
C1': (46.258,64.165,110.445)
C5': (46.338,61.997,107.619)
O4': (46.815,63.059,109.751)
C8: (47.843,65.468,108.942)
O2': (44.148,63.356,111.260)
C6: (47.304,68.871,109.674)
C5: (47.401,67.476,109.486)
C4: (46.569,66.682,110.252)
P: (47.510,59.706,108.165)
C4': (45.790,62.405,108.964)
C2': (44.746,64.109,110.227)
C2: (45.661,68.432,111.237)
N1: (46.402,69.323,110.571)
N3: (45.666,67.103,111.158)
N6: (48.056,69.763,109.023)
N7: (48.199,66.694,108.658)
N9: (46.864,65.382,109.901)
O5': (47.552,61.245,107.777)
O3': (43.458,62.825,108.561)
Image (generated by PyMOL):
PyMOL image
show in jmol