Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:013:0507
Extra
PDB:
ATOM 1 O3' U A 12 34.034 147.659 73.935 1.00 40.55 O
ATOM 2 P G A 13 34.447 147.250 72.442 1.00 37.99 P
ATOM 3 OP1 G A 13 35.841 147.688 72.235 1.00 42.31 O
ATOM 4 OP2 G A 13 33.394 147.705 71.514 1.00 40.37 O
ATOM 5 O5' G A 13 34.426 145.662 72.447 1.00 41.20 O
ATOM 6 C5' G A 13 35.419 144.897 73.142 1.00 39.04 C
ATOM 7 C4' G A 13 35.048 143.438 73.096 1.00 40.35 C
ATOM 8 O4' G A 13 33.760 143.255 73.745 1.00 41.61 O
ATOM 9 C3' G A 13 34.840 142.890 71.697 1.00 39.32 C
ATOM 10 O3' G A 13 36.084 142.497 71.140 1.00 38.50 O
ATOM 11 C2' G A 13 33.883 141.729 71.936 1.00 38.66 C
ATOM 12 O2' G A 13 34.531 140.612 72.497 1.00 38.81 O
ATOM 13 C1' G A 13 32.987 142.309 73.028 1.00 39.79 C
ATOM 14 N9 G A 13 31.789 142.993 72.557 1.00 40.49 N
ATOM 15 C8 G A 13 31.713 144.269 72.053 1.00 39.20 C
ATOM 16 N7 G A 13 30.494 144.640 71.781 1.00 38.41 N
ATOM 17 C5 G A 13 29.716 143.539 72.106 1.00 38.33 C
ATOM 18 C6 G A 13 28.312 143.356 72.023 1.00 36.64 C
ATOM 19 O6 G A 13 27.458 144.173 71.662 1.00 34.39 O
ATOM 20 N1 G A 13 27.934 142.073 72.426 1.00 35.77 N
ATOM 21 C2 G A 13 28.803 141.098 72.868 1.00 39.55 C
ATOM 22 N2 G A 13 28.264 139.919 73.202 1.00 38.01 N
ATOM 23 N3 G A 13 30.117 141.267 72.969 1.00 39.86 N
ATOM 24 C4 G A 13 30.500 142.504 72.570 1.00 40.56 C
ATOM 25 P G A 14 36.388 142.786 69.587 1.00 36.73 P
ATOM 26 OP1 G A 14 37.855 142.701 69.372 1.00 37.13 O
ATOM 27 OP2 G A 14 35.665 144.023 69.219 1.00 36.78 O
ATOM 28 O5' G A 14 35.716 141.555 68.841 1.00 35.42 O
TER
ATOM 1 O3' G B 506 24.618 139.776 70.101 1.00 40.38 O
ATOM 2 P A B 507 24.496 139.845 71.706 1.00 39.46 P
ATOM 3 OP1 A B 507 23.115 140.218 72.085 1.00 36.60 O
ATOM 4 OP2 A B 507 25.634 140.663 72.201 1.00 38.51 O
ATOM 5 O5' A B 507 24.779 138.333 72.134 1.00 38.35 O
ATOM 6 C5' A B 507 23.898 137.261 71.732 1.00 37.53 C
ATOM 7 C4' A B 507 24.460 135.928 72.182 1.00 39.53 C
ATOM 8 O4' A B 507 25.353 135.337 71.200 1.00 39.37 O
ATOM 9 C3' A B 507 25.232 135.975 73.487 1.00 39.15 C
ATOM 10 O3' A B 507 24.355 135.789 74.587 1.00 38.79 O
ATOM 11 C2' A B 507 26.256 134.859 73.329 1.00 39.41 C
ATOM 12 O2' A B 507 25.710 133.595 73.646 1.00 40.35 O
ATOM 13 C1' A B 507 26.561 134.943 71.830 1.00 38.89 C
ATOM 14 N9 A B 507 27.584 135.928 71.467 1.00 40.31 N
ATOM 15 C8 A B 507 27.368 137.127 70.828 1.00 40.07 C
ATOM 16 N7 A B 507 28.458 137.799 70.577 1.00 38.59 N
ATOM 17 C5 A B 507 29.467 137.000 71.091 1.00 39.30 C
ATOM 18 C6 A B 507 30.861 137.153 71.124 1.00 38.91 C
ATOM 19 N6 A B 507 31.500 138.201 70.599 1.00 33.80 N
ATOM 20 N1 A B 507 31.586 136.176 71.715 1.00 42.24 N
ATOM 21 C2 A B 507 30.939 135.121 72.229 1.00 42.32 C
ATOM 22 N3 A B 507 29.629 134.863 72.256 1.00 40.42 N
ATOM 23 C4 A B 507 28.942 135.850 71.659 1.00 39.82 C
ATOM 24 P A B 508 24.689 136.475 75.995 1.00 40.50 P
ATOM 25 OP1 A B 508 23.553 136.126 76.876 1.00 41.35 O
ATOM 26 OP2 A B 508 25.036 137.908 75.783 1.00 39.91 O
ATOM 27 O5' A B 508 26.008 135.717 76.478 1.00 38.61 O
TER
ATOM 2 P G A 13 34.447 147.250 72.442 1.00 37.99 P
ATOM 3 OP1 G A 13 35.841 147.688 72.235 1.00 42.31 O
ATOM 4 OP2 G A 13 33.394 147.705 71.514 1.00 40.37 O
ATOM 5 O5' G A 13 34.426 145.662 72.447 1.00 41.20 O
ATOM 6 C5' G A 13 35.419 144.897 73.142 1.00 39.04 C
ATOM 7 C4' G A 13 35.048 143.438 73.096 1.00 40.35 C
ATOM 8 O4' G A 13 33.760 143.255 73.745 1.00 41.61 O
ATOM 9 C3' G A 13 34.840 142.890 71.697 1.00 39.32 C
ATOM 10 O3' G A 13 36.084 142.497 71.140 1.00 38.50 O
ATOM 11 C2' G A 13 33.883 141.729 71.936 1.00 38.66 C
ATOM 12 O2' G A 13 34.531 140.612 72.497 1.00 38.81 O
ATOM 13 C1' G A 13 32.987 142.309 73.028 1.00 39.79 C
ATOM 14 N9 G A 13 31.789 142.993 72.557 1.00 40.49 N
ATOM 15 C8 G A 13 31.713 144.269 72.053 1.00 39.20 C
ATOM 16 N7 G A 13 30.494 144.640 71.781 1.00 38.41 N
ATOM 17 C5 G A 13 29.716 143.539 72.106 1.00 38.33 C
ATOM 18 C6 G A 13 28.312 143.356 72.023 1.00 36.64 C
ATOM 19 O6 G A 13 27.458 144.173 71.662 1.00 34.39 O
ATOM 20 N1 G A 13 27.934 142.073 72.426 1.00 35.77 N
ATOM 21 C2 G A 13 28.803 141.098 72.868 1.00 39.55 C
ATOM 22 N2 G A 13 28.264 139.919 73.202 1.00 38.01 N
ATOM 23 N3 G A 13 30.117 141.267 72.969 1.00 39.86 N
ATOM 24 C4 G A 13 30.500 142.504 72.570 1.00 40.56 C
ATOM 25 P G A 14 36.388 142.786 69.587 1.00 36.73 P
ATOM 26 OP1 G A 14 37.855 142.701 69.372 1.00 37.13 O
ATOM 27 OP2 G A 14 35.665 144.023 69.219 1.00 36.78 O
ATOM 28 O5' G A 14 35.716 141.555 68.841 1.00 35.42 O
TER
ATOM 1 O3' G B 506 24.618 139.776 70.101 1.00 40.38 O
ATOM 2 P A B 507 24.496 139.845 71.706 1.00 39.46 P
ATOM 3 OP1 A B 507 23.115 140.218 72.085 1.00 36.60 O
ATOM 4 OP2 A B 507 25.634 140.663 72.201 1.00 38.51 O
ATOM 5 O5' A B 507 24.779 138.333 72.134 1.00 38.35 O
ATOM 6 C5' A B 507 23.898 137.261 71.732 1.00 37.53 C
ATOM 7 C4' A B 507 24.460 135.928 72.182 1.00 39.53 C
ATOM 8 O4' A B 507 25.353 135.337 71.200 1.00 39.37 O
ATOM 9 C3' A B 507 25.232 135.975 73.487 1.00 39.15 C
ATOM 10 O3' A B 507 24.355 135.789 74.587 1.00 38.79 O
ATOM 11 C2' A B 507 26.256 134.859 73.329 1.00 39.41 C
ATOM 12 O2' A B 507 25.710 133.595 73.646 1.00 40.35 O
ATOM 13 C1' A B 507 26.561 134.943 71.830 1.00 38.89 C
ATOM 14 N9 A B 507 27.584 135.928 71.467 1.00 40.31 N
ATOM 15 C8 A B 507 27.368 137.127 70.828 1.00 40.07 C
ATOM 16 N7 A B 507 28.458 137.799 70.577 1.00 38.59 N
ATOM 17 C5 A B 507 29.467 137.000 71.091 1.00 39.30 C
ATOM 18 C6 A B 507 30.861 137.153 71.124 1.00 38.91 C
ATOM 19 N6 A B 507 31.500 138.201 70.599 1.00 33.80 N
ATOM 20 N1 A B 507 31.586 136.176 71.715 1.00 42.24 N
ATOM 21 C2 A B 507 30.939 135.121 72.229 1.00 42.32 C
ATOM 22 N3 A B 507 29.629 134.863 72.256 1.00 40.42 N
ATOM 23 C4 A B 507 28.942 135.850 71.659 1.00 39.82 C
ATOM 24 P A B 508 24.689 136.475 75.995 1.00 40.50 P
ATOM 25 OP1 A B 508 23.553 136.126 76.876 1.00 41.35 O
ATOM 26 OP2 A B 508 25.036 137.908 75.783 1.00 39.91 O
ATOM 27 O5' A B 508 26.008 135.717 76.478 1.00 38.61 O
TER
Atoms:
OP1: (35.841,147.688,72.235)
OP2: (33.394,147.705,71.514)
C3': (34.840,142.890,71.697)
C1': (32.987,142.309,73.028)
C5': (35.419,144.897,73.142)
O6: (27.458,144.173,71.662)
O4': (33.760,143.255,73.745)
C8: (31.713,144.269,72.053)
C2: (28.803,141.098,72.868)
C6: (28.312,143.356,72.023)
C5: (29.716,143.539,72.106)
C4: (30.500,142.504,72.570)
P: (34.447,147.250,72.442)
C4': (35.048,143.438,73.096)
C2': (33.883,141.729,71.936)
O2': (34.531,140.612,72.497)
N1: (27.934,142.073,72.426)
N2: (28.264,139.919,73.202)
N3: (30.117,141.267,72.969)
N7: (30.494,144.640,71.781)
N9: (31.789,142.993,72.557)
O5': (34.426,145.662,72.447)
O3': (36.084,142.497,71.140)
OP2: (33.394,147.705,71.514)
C3': (34.840,142.890,71.697)
C1': (32.987,142.309,73.028)
C5': (35.419,144.897,73.142)
O6: (27.458,144.173,71.662)
O4': (33.760,143.255,73.745)
C8: (31.713,144.269,72.053)
C2: (28.803,141.098,72.868)
C6: (28.312,143.356,72.023)
C5: (29.716,143.539,72.106)
C4: (30.500,142.504,72.570)
P: (34.447,147.250,72.442)
C4': (35.048,143.438,73.096)
C2': (33.883,141.729,71.936)
O2': (34.531,140.612,72.497)
N1: (27.934,142.073,72.426)
N2: (28.264,139.919,73.202)
N3: (30.117,141.267,72.969)
N7: (30.494,144.640,71.781)
N9: (31.789,142.993,72.557)
O5': (34.426,145.662,72.447)
O3': (36.084,142.497,71.140)
OP1: (23.115,140.218,72.085)
OP2: (25.634,140.663,72.201)
C3': (25.232,135.975,73.487)
C1': (26.561,134.943,71.830)
C5': (23.898,137.261,71.732)
O4': (25.353,135.337,71.200)
C8: (27.368,137.127,70.828)
O2': (25.710,133.595,73.646)
C6: (30.861,137.153,71.124)
C5: (29.467,137.000,71.091)
C4: (28.942,135.850,71.659)
P: (24.496,139.845,71.706)
C4': (24.460,135.928,72.182)
C2': (26.256,134.859,73.329)
C2: (30.939,135.121,72.229)
N1: (31.586,136.176,71.715)
N3: (29.629,134.863,72.256)
N6: (31.500,138.201,70.599)
N7: (28.458,137.799,70.577)
N9: (27.584,135.928,71.467)
O5': (24.779,138.333,72.134)
O3': (24.355,135.789,74.587)
OP2: (25.634,140.663,72.201)
C3': (25.232,135.975,73.487)
C1': (26.561,134.943,71.830)
C5': (23.898,137.261,71.732)
O4': (25.353,135.337,71.200)
C8: (27.368,137.127,70.828)
O2': (25.710,133.595,73.646)
C6: (30.861,137.153,71.124)
C5: (29.467,137.000,71.091)
C4: (28.942,135.850,71.659)
P: (24.496,139.845,71.706)
C4': (24.460,135.928,72.182)
C2': (26.256,134.859,73.329)
C2: (30.939,135.121,72.229)
N1: (31.586,136.176,71.715)
N3: (29.629,134.863,72.256)
N6: (31.500,138.201,70.599)
N7: (28.458,137.799,70.577)
N9: (27.584,135.928,71.467)
O5': (24.779,138.333,72.134)
O3': (24.355,135.789,74.587)
Image (generated by PyMOL):