ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1628:A1641

Extra

PDB:
ATOM 1 O3' C A1627 40.866 -12.768 27.074 1.00 67.25 O
ATOM 2 P G A1628 41.514 -11.696 26.097 1.00 80.19 P
ATOM 3 OP1 G A1628 41.463 -10.380 26.777 1.00 85.54 O
ATOM 4 OP2 G A1628 40.846 -11.848 24.782 1.00 62.59 O
ATOM 5 O5' G A1628 43.015 -12.215 26.026 1.00 70.59 O
ATOM 6 C5' G A1628 43.583 -12.869 27.149 1.00 66.27 C
ATOM 7 C4' G A1628 44.910 -13.471 26.825 1.00 70.58 C
ATOM 8 O4' G A1628 44.743 -14.878 26.512 1.00 71.43 O
ATOM 9 C3' G A1628 45.613 -12.875 25.620 1.00 68.29 C
ATOM 10 O3' G A1628 46.355 -11.712 25.951 1.00 65.73 O
ATOM 11 C2' G A1628 46.457 -14.040 25.110 1.00 63.07 C
ATOM 12 O2' G A1628 47.636 -14.196 25.892 1.00 62.10 O
ATOM 13 C1' G A1628 45.525 -15.220 25.394 1.00 64.43 C
ATOM 14 N9 G A1628 44.596 -15.461 24.290 1.00 64.39 N
ATOM 15 C8 G A1628 43.339 -14.932 24.250 1.00 60.39 C
ATOM 16 N7 G A1628 42.686 -15.286 23.181 1.00 66.85 N
ATOM 17 C5 G A1628 43.559 -16.107 22.489 1.00 63.41 C
ATOM 18 C6 G A1628 43.388 -16.782 21.258 1.00 62.17 C
ATOM 19 O6 G A1628 42.394 -16.791 20.514 1.00 62.27 O
ATOM 20 N1 G A1628 44.543 -17.492 20.927 1.00 63.38 N
ATOM 21 C2 G A1628 45.696 -17.552 21.675 1.00 56.09 C
ATOM 22 N2 G A1628 46.691 -18.295 21.191 1.00 53.92 N
ATOM 23 N3 G A1628 45.859 -16.932 22.825 1.00 66.31 N
ATOM 24 C4 G A1628 44.754 -16.232 23.167 1.00 68.80 C
ATOM 25 P U A1629 47.190 -10.945 24.825 1.00 79.90 P
ATOM 26 OP1 U A1629 47.628 -9.650 25.393 1.00 88.40 O
ATOM 27 OP2 U A1629 46.357 -10.941 23.596 1.00 73.13 O
ATOM 28 O5' U A1629 48.443 -11.897 24.644 1.00 82.37 O
TER

ATOM 1 O3' G B1640 46.715 -20.455 16.742 1.00 57.96 O
ATOM 2 P A B1641 46.276 -19.025 17.336 1.00 60.69 P
ATOM 3 OP1 A B1641 45.353 -19.306 18.471 1.00 47.18 O
ATOM 4 OP2 A B1641 45.798 -18.187 16.192 1.00 63.08 O
ATOM 5 O5' A B1641 47.633 -18.433 17.884 1.00 56.54 O
ATOM 6 C5' A B1641 48.574 -19.265 18.528 1.00 55.72 C
ATOM 7 C4' A B1641 49.761 -19.565 17.646 1.00 56.37 C
ATOM 8 O4' A B1641 50.576 -18.368 17.485 1.00 61.31 O
ATOM 9 C3' A B1641 50.715 -20.610 18.199 1.00 57.98 C
ATOM 10 O3' A B1641 50.305 -21.925 17.892 1.00 59.86 O
ATOM 11 C2' A B1641 52.066 -20.225 17.603 1.00 56.05 C
ATOM 12 O2' A B1641 52.220 -20.754 16.295 1.00 69.01 O
ATOM 13 C1' A B1641 51.948 -18.701 17.509 1.00 64.61 C
ATOM 14 N9 A B1641 52.583 -18.031 18.659 1.00 59.02 N
ATOM 15 C8 A B1641 52.023 -17.362 19.712 1.00 61.13 C
ATOM 16 N7 A B1641 52.900 -16.907 20.570 1.00 60.94 N
ATOM 17 C5 A B1641 54.116 -17.300 20.042 1.00 61.38 C
ATOM 18 C6 A B1641 55.445 -17.133 20.477 1.00 59.51 C
ATOM 19 N6 A B1641 55.794 -16.482 21.577 1.00 67.68 N
ATOM 20 N1 A B1641 56.428 -17.653 19.731 1.00 54.30 N
ATOM 21 C2 A B1641 56.063 -18.310 18.624 1.00 61.58 C
ATOM 22 N3 A B1641 54.861 -18.538 18.098 1.00 57.68 N
ATOM 23 C4 A B1641 53.925 -17.991 18.870 1.00 53.72 C
ATOM 24 P A B1642 49.972 -22.966 19.065 1.00 52.51 P
ATOM 25 OP1 A B1642 50.303 -24.311 18.548 1.00 67.38 O
ATOM 26 OP2 A B1642 48.586 -22.700 19.538 1.00 46.05 O
ATOM 27 O5' A B1642 51.004 -22.560 20.186 1.00 58.98 O
TER

Atoms:
OP1: (41.463,-10.380,26.777)
OP2: (40.846,-11.848,24.782)
C3': (45.613,-12.875,25.620)
C1': (45.525,-15.220,25.394)
C5': (43.583,-12.869,27.149)
O6: (42.394,-16.791,20.514)
O4': (44.743,-14.878,26.512)
C8: (43.339,-14.932,24.250)
C2: (45.696,-17.552,21.675)
C6: (43.388,-16.782,21.258)
C5: (43.559,-16.107,22.489)
C4: (44.754,-16.232,23.167)
P: (41.514,-11.696,26.097)
C4': (44.910,-13.471,26.825)
C2': (46.457,-14.040,25.110)
O2': (47.636,-14.196,25.892)
N1: (44.543,-17.492,20.927)
N2: (46.691,-18.295,21.191)
N3: (45.859,-16.932,22.825)
N7: (42.686,-15.286,23.181)
N9: (44.596,-15.461,24.290)
O5': (43.015,-12.215,26.026)
O3': (46.355,-11.712,25.951)
OP1: (45.353,-19.306,18.471)
OP2: (45.798,-18.187,16.192)
C3': (50.715,-20.610,18.199)
C1': (51.948,-18.701,17.509)
C5': (48.574,-19.265,18.528)
O4': (50.576,-18.368,17.485)
C8: (52.023,-17.362,19.712)
O2': (52.220,-20.754,16.295)
C6: (55.445,-17.133,20.477)
C5: (54.116,-17.300,20.042)
C4: (53.925,-17.991,18.870)
P: (46.276,-19.025,17.336)
C4': (49.761,-19.565,17.646)
C2': (52.066,-20.225,17.603)
C2: (56.063,-18.310,18.624)
N1: (56.428,-17.653,19.731)
N3: (54.861,-18.538,18.098)
N6: (55.794,-16.482,21.577)
N7: (52.900,-16.907,20.570)
N9: (52.583,-18.031,18.659)
O5': (47.633,-18.433,17.884)
O3': (50.305,-21.925,17.892)
Image (generated by PyMOL):
PyMOL image
show in jmol