ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GX3:A17:A35

Extra

PDB:
ATOM 1 O3' U A 16 60.845 76.353 9.879 1.00 89.73 O
ATOM 2 P G A 17 61.224 75.809 8.430 1.00 95.69 P
ATOM 3 OP1 G A 17 62.147 76.743 7.744 1.00 91.58 O
ATOM 4 OP2 G A 17 59.947 75.449 7.767 1.00 89.96 O
ATOM 5 O5' G A 17 62.122 74.524 8.779 1.00 84.98 O
ATOM 6 C5' G A 17 62.821 74.482 10.019 1.00 83.71 C
ATOM 7 C4' G A 17 63.200 73.067 10.379 1.00 84.08 C
ATOM 8 O4' G A 17 62.063 72.367 10.953 1.00 84.51 O
ATOM 9 C3' G A 17 63.610 72.202 9.199 1.00 86.27 C
ATOM 10 O3' G A 17 64.977 72.388 8.853 1.00 91.90 O
ATOM 11 C2' G A 17 63.241 70.791 9.651 1.00 81.74 C
ATOM 12 O2' G A 17 64.209 70.278 10.559 1.00 78.40 O
ATOM 13 C1' G A 17 61.955 71.059 10.432 1.00 78.36 C
ATOM 14 N9 G A 17 60.735 71.069 9.604 1.00 76.45 N
ATOM 15 C8 G A 17 60.328 72.124 8.825 1.00 77.71 C
ATOM 16 N7 G A 17 59.189 71.924 8.224 1.00 76.77 N
ATOM 17 C5 G A 17 58.795 70.661 8.638 1.00 72.59 C
ATOM 18 C6 G A 17 57.630 69.922 8.302 1.00 72.66 C
ATOM 19 O6 G A 17 56.683 70.234 7.548 1.00 76.50 O
ATOM 20 N1 G A 17 57.631 68.688 8.946 1.00 69.45 N
ATOM 21 C2 G A 17 58.615 68.235 9.793 1.00 69.72 C
ATOM 22 N2 G A 17 58.419 67.009 10.310 1.00 66.12 N
ATOM 23 N3 G A 17 59.708 68.926 10.111 1.00 72.48 N
ATOM 24 C4 G A 17 59.735 70.126 9.496 1.00 73.23 C
ATOM 25 P G A 18 65.579 72.058 7.397 1.00 90.99 P
ATOM 26 OP1 G A 18 66.566 73.153 7.603 1.00 86.98 O
ATOM 27 OP2 G A 18 64.190 72.180 6.871 1.00 78.73 O
ATOM 28 O5' G A 18 66.074 70.786 8.250 1.00 86.16 O
TER

ATOM 1 O3' G B 34 55.847 64.449 6.786 1.00 67.32 O
ATOM 2 P A B 35 55.615 64.587 8.343 1.00 69.38 P
ATOM 3 OP1 A B 35 54.207 64.219 8.623 1.00 62.81 O
ATOM 4 OP2 A B 35 56.212 65.848 8.843 1.00 72.68 O
ATOM 5 O5' A B 35 56.481 63.360 8.870 1.00 60.07 O
ATOM 6 C5' A B 35 55.891 62.086 8.704 1.00 58.64 C
ATOM 7 C4' A B 35 56.821 60.997 9.140 1.00 56.90 C
ATOM 8 O4' A B 35 57.950 61.030 8.232 1.00 66.23 O
ATOM 9 C3' A B 35 57.420 61.193 10.521 1.00 62.28 C
ATOM 10 O3' A B 35 56.774 60.430 11.528 1.00 69.91 O
ATOM 11 C2' A B 35 58.882 60.773 10.388 1.00 63.87 C
ATOM 12 O2' A B 35 59.113 59.426 10.752 1.00 64.41 O
ATOM 13 C1' A B 35 59.190 60.954 8.913 1.00 65.78 C
ATOM 14 N9 A B 35 59.921 62.217 8.701 1.00 65.53 N
ATOM 15 C8 A B 35 59.523 63.315 7.973 1.00 64.49 C
ATOM 16 N7 A B 35 60.381 64.312 7.993 1.00 63.64 N
ATOM 17 C5 A B 35 61.398 63.843 8.810 1.00 62.10 C
ATOM 18 C6 A B 35 62.601 64.423 9.234 1.00 63.32 C
ATOM 19 N6 A B 35 63.006 65.644 8.879 1.00 68.66 N
ATOM 20 N1 A B 35 63.403 63.691 10.022 1.00 63.40 N
ATOM 21 C2 A B 35 63.025 62.463 10.389 1.00 65.09 C
ATOM 22 N3 A B 35 61.914 61.808 10.064 1.00 63.00 N
ATOM 23 C4 A B 35 61.141 62.559 9.258 1.00 61.64 C
ATOM 24 P A B 36 56.478 61.274 12.853 1.00 61.66 P
ATOM 25 OP1 A B 36 55.768 60.322 13.735 1.00 61.34 O
ATOM 26 OP2 A B 36 55.920 62.615 12.540 1.00 51.52 O
ATOM 27 O5' A B 36 57.924 61.442 13.518 1.00 59.71 O
TER

Atoms:
OP1: (62.147,76.743,7.744)
OP2: (59.947,75.449,7.767)
C3': (63.610,72.202,9.199)
C1': (61.955,71.059,10.432)
C5': (62.821,74.482,10.019)
O6: (56.683,70.234,7.548)
O4': (62.063,72.367,10.953)
C8: (60.328,72.124,8.825)
C2: (58.615,68.235,9.793)
C6: (57.630,69.922,8.302)
C5: (58.795,70.661,8.638)
C4: (59.735,70.126,9.496)
P: (61.224,75.809,8.430)
C4': (63.200,73.067,10.379)
C2': (63.241,70.791,9.651)
O2': (64.209,70.278,10.559)
N1: (57.631,68.688,8.946)
N2: (58.419,67.009,10.310)
N3: (59.708,68.926,10.111)
N7: (59.189,71.924,8.224)
N9: (60.735,71.069,9.604)
O5': (62.122,74.524,8.779)
O3': (64.977,72.388,8.853)
OP1: (54.207,64.219,8.623)
OP2: (56.212,65.848,8.843)
C3': (57.420,61.193,10.521)
C1': (59.190,60.954,8.913)
C5': (55.891,62.086,8.704)
O4': (57.950,61.030,8.232)
C8: (59.523,63.315,7.973)
O2': (59.113,59.426,10.752)
C6: (62.601,64.423,9.234)
C5: (61.398,63.843,8.810)
C4: (61.141,62.559,9.258)
P: (55.615,64.587,8.343)
C4': (56.821,60.997,9.140)
C2': (58.882,60.773,10.388)
C2: (63.025,62.463,10.389)
N1: (63.403,63.691,10.022)
N3: (61.914,61.808,10.064)
N6: (63.006,65.644,8.879)
N7: (60.381,64.312,7.993)
N9: (59.921,62.217,8.701)
O5': (56.481,63.360,8.870)
O3': (56.774,60.430,11.528)
Image (generated by PyMOL):
PyMOL image
show in jmol