ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTJ:0257:0229

Extra

PDB:
ATOM 1 O3' U A 256 80.043 108.052 -4.708 1.00 58.38 O
ATOM 2 P G A 257 78.815 107.645 -3.749 1.00 60.21 P
ATOM 3 OP1 G A 257 77.938 106.664 -4.456 1.00 59.61 O
ATOM 4 OP2 G A 257 78.219 108.902 -3.211 1.00 59.65 O
ATOM 5 O5' G A 257 79.522 106.879 -2.546 1.00 58.87 O
ATOM 6 C5' G A 257 80.297 105.691 -2.773 1.00 57.40 C
ATOM 7 C4' G A 257 80.872 105.214 -1.467 1.00 57.34 C
ATOM 8 O4' G A 257 81.918 106.129 -1.035 1.00 57.29 O
ATOM 9 C3' G A 257 79.861 105.205 -0.331 1.00 57.29 C
ATOM 10 O3' G A 257 79.099 104.001 -0.315 1.00 59.06 O
ATOM 11 C2' G A 257 80.741 105.407 0.896 1.00 56.76 C
ATOM 12 O2' G A 257 81.394 104.218 1.306 1.00 56.19 O
ATOM 13 C1' G A 257 81.778 106.397 0.352 1.00 55.23 C
ATOM 14 N9 G A 257 81.383 107.797 0.482 1.00 52.20 N
ATOM 15 C8 G A 257 80.279 108.399 -0.074 1.00 51.48 C
ATOM 16 N7 G A 257 80.202 109.675 0.190 1.00 49.74 N
ATOM 17 C5 G A 257 81.316 109.929 0.977 1.00 49.26 C
ATOM 18 C6 G A 257 81.760 111.132 1.571 1.00 48.08 C
ATOM 19 O6 G A 257 81.243 112.248 1.517 1.00 47.28 O
ATOM 20 N1 G A 257 82.934 110.944 2.291 1.00 47.74 N
ATOM 21 C2 G A 257 83.596 109.748 2.423 1.00 49.20 C
ATOM 22 N2 G A 257 84.708 109.762 3.161 1.00 49.40 N
ATOM 23 N3 G A 257 83.193 108.616 1.872 1.00 49.78 N
ATOM 24 C4 G A 257 82.054 108.778 1.169 1.00 50.85 C
ATOM 25 P U A 258 77.649 103.986 0.381 1.00 60.41 P
ATOM 26 OP1 U A 258 76.914 102.769 -0.048 1.00 60.79 O
ATOM 27 OP2 U A 258 77.035 105.325 0.150 1.00 61.27 O
ATOM 28 O5' U A 258 77.997 103.826 1.929 1.00 61.49 O
TER

ATOM 1 O3' C B 228 83.833 113.220 6.111 1.00 55.55 O
ATOM 2 P A B 229 85.080 112.952 5.128 1.00 55.82 P
ATOM 3 OP1 A B 229 85.761 114.258 4.933 1.00 55.49 O
ATOM 4 OP2 A B 229 84.581 112.202 3.944 1.00 56.22 O
ATOM 5 O5' A B 229 86.042 112.016 5.983 1.00 54.99 O
ATOM 6 C5' A B 229 86.644 112.507 7.181 1.00 53.95 C
ATOM 7 C4' A B 229 87.341 111.390 7.912 1.00 53.82 C
ATOM 8 O4' A B 229 86.377 110.434 8.408 1.00 54.05 O
ATOM 9 C3' A B 229 88.221 110.506 7.059 1.00 54.29 C
ATOM 10 O3' A B 229 89.442 111.133 6.745 1.00 55.07 O
ATOM 11 C2' A B 229 88.414 109.301 7.962 1.00 53.88 C
ATOM 12 O2' A B 229 89.370 109.555 8.967 1.00 53.47 O
ATOM 13 C1' A B 229 87.028 109.190 8.596 1.00 54.10 C
ATOM 14 N9 A B 229 86.207 108.133 8.011 1.00 54.35 N
ATOM 15 C8 A B 229 85.210 108.216 7.069 1.00 54.59 C
ATOM 16 N7 A B 229 84.669 107.058 6.769 1.00 55.20 N
ATOM 17 C5 A B 229 85.361 106.152 7.565 1.00 55.27 C
ATOM 18 C6 A B 229 85.277 104.751 7.712 1.00 55.61 C
ATOM 19 N6 A B 229 84.433 103.977 7.023 1.00 56.61 N
ATOM 20 N1 A B 229 86.109 104.163 8.599 1.00 56.13 N
ATOM 21 C2 A B 229 86.970 104.929 9.279 1.00 55.31 C
ATOM 22 N3 A B 229 87.152 106.244 9.223 1.00 55.42 N
ATOM 23 C4 A B 229 86.306 106.802 8.336 1.00 55.26 C
ATOM 24 P A B 230 89.878 111.246 5.212 1.00 55.60 P
ATOM 25 OP1 A B 230 91.100 112.093 5.147 1.00 55.30 O
ATOM 26 OP2 A B 230 88.665 111.628 4.431 1.00 55.08 O
ATOM 27 O5' A B 230 90.267 109.751 4.833 1.00 53.94 O
TER

Atoms:
OP1: (77.938,106.664,-4.456)
OP2: (78.219,108.902,-3.211)
C3': (79.861,105.205,-0.331)
C1': (81.778,106.397,0.352)
C5': (80.297,105.691,-2.773)
O6: (81.243,112.248,1.517)
O4': (81.918,106.129,-1.035)
C8: (80.279,108.399,-0.074)
C2: (83.596,109.748,2.423)
C6: (81.760,111.132,1.571)
C5: (81.316,109.929,0.977)
C4: (82.054,108.778,1.169)
P: (78.815,107.645,-3.749)
C4': (80.872,105.214,-1.467)
C2': (80.741,105.407,0.896)
O2': (81.394,104.218,1.306)
N1: (82.934,110.944,2.291)
N2: (84.708,109.762,3.161)
N3: (83.193,108.616,1.872)
N7: (80.202,109.675,0.190)
N9: (81.383,107.797,0.482)
O5': (79.522,106.879,-2.546)
O3': (79.099,104.001,-0.315)
OP1: (85.761,114.258,4.933)
OP2: (84.581,112.202,3.944)
C3': (88.221,110.506,7.059)
C1': (87.028,109.190,8.596)
C5': (86.644,112.507,7.181)
O4': (86.377,110.434,8.408)
C8: (85.210,108.216,7.069)
O2': (89.370,109.555,8.967)
C6: (85.277,104.751,7.712)
C5: (85.361,106.152,7.565)
C4: (86.306,106.802,8.336)
P: (85.080,112.952,5.128)
C4': (87.341,111.390,7.912)
C2': (88.414,109.301,7.962)
C2: (86.970,104.929,9.279)
N1: (86.109,104.163,8.599)
N3: (87.152,106.244,9.223)
N6: (84.433,103.977,7.023)
N7: (84.669,107.058,6.769)
N9: (86.207,108.133,8.011)
O5': (86.042,112.016,5.983)
O3': (89.442,111.133,6.745)
Image (generated by PyMOL):
PyMOL image
show in jmol