Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A499:A502
Extra
PDB:
ATOM 1 O3' U A 498 -3.861 152.903 225.409 1.00 7.45 O
ATOM 2 P G A 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 3 OP1 G A 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 4 OP2 G A 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 5 O5' G A 499 -6.118 153.798 224.824 1.00 7.91 O
ATOM 6 C5' G A 499 -6.259 154.984 224.081 1.00 7.91 C
ATOM 7 C4' G A 499 -7.458 154.915 223.204 1.00 7.91 C
ATOM 8 O4' G A 499 -7.463 153.649 222.508 1.00 7.91 O
ATOM 9 C3' G A 499 -8.781 154.940 223.924 1.00 7.91 C
ATOM 10 O3' G A 499 -9.188 156.241 224.269 1.00 7.91 O
ATOM 11 C2' G A 499 -9.704 154.244 222.943 1.00 7.91 C
ATOM 12 O2' G A 499 -10.071 155.105 221.879 1.00 7.91 O
ATOM 13 C1' G A 499 -8.778 153.163 222.406 1.00 7.91 C
ATOM 14 N9 G A 499 -8.877 151.962 223.220 1.00 8.00 N
ATOM 15 C8 G A 499 -8.124 151.628 224.302 1.00 8.00 C
ATOM 16 N7 G A 499 -8.534 150.509 224.827 1.00 8.00 N
ATOM 17 C5 G A 499 -9.615 150.119 224.051 1.00 8.00 C
ATOM 18 C6 G A 499 -10.449 149.001 224.138 1.00 8.00 C
ATOM 19 O6 G A 499 -10.401 148.096 224.946 1.00 8.00 O
ATOM 20 N1 G A 499 -11.410 149.004 223.155 1.00 8.00 N
ATOM 21 C2 G A 499 -11.556 149.977 222.195 1.00 8.00 C
ATOM 22 N2 G A 499 -12.566 149.808 221.322 1.00 8.00 N
ATOM 23 N3 G A 499 -10.777 151.040 222.090 1.00 8.00 N
ATOM 24 C4 G A 499 -9.842 151.024 223.053 1.00 8.00 C
ATOM 25 P A A 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 26 OP1 A A 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 27 OP2 A A 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 28 O5' A A 500 -11.203 156.376 225.727 1.00 0.40 O
TER
ATOM 1 O3' A B 501 -15.675 148.696 222.908 1.00 0.74 O
ATOM 2 P A B 502 -14.691 147.454 223.152 1.00 2.63 P
ATOM 3 OP1 A B 502 -15.526 146.311 223.540 1.00 2.63 O
ATOM 4 OP2 A B 502 -13.648 147.911 224.083 1.00 2.63 O
ATOM 5 O5' A B 502 -14.071 147.196 221.701 1.00 2.63 O
ATOM 6 C5' A B 502 -14.930 146.906 220.613 1.00 2.63 C
ATOM 7 C4' A B 502 -14.197 146.373 219.398 1.00 2.63 C
ATOM 8 O4' A B 502 -13.236 147.355 218.923 1.00 2.63 O
ATOM 9 C3' A B 502 -13.431 145.047 219.575 1.00 2.63 C
ATOM 10 O3' A B 502 -13.828 144.109 218.574 1.00 2.63 O
ATOM 11 C2' A B 502 -11.965 145.440 219.344 1.00 2.63 C
ATOM 12 O2' A B 502 -11.174 144.439 218.720 1.00 2.63 O
ATOM 13 C1' A B 502 -12.088 146.684 218.467 1.00 2.63 C
ATOM 14 N9 A B 502 -10.949 147.581 218.583 1.00 2.45 N
ATOM 15 C8 A B 502 -10.165 147.727 219.695 1.00 2.45 C
ATOM 16 N7 A B 502 -9.192 148.574 219.532 1.00 2.45 N
ATOM 17 C5 A B 502 -9.339 148.994 218.228 1.00 2.45 C
ATOM 18 C6 A B 502 -8.602 149.897 217.473 1.00 2.45 C
ATOM 19 N6 A B 502 -7.547 150.540 217.976 1.00 2.45 N
ATOM 20 N1 A B 502 -9.006 150.126 216.211 1.00 2.45 N
ATOM 21 C2 A B 502 -10.073 149.468 215.774 1.00 2.45 C
ATOM 22 N3 A B 502 -10.852 148.585 216.390 1.00 2.45 N
ATOM 23 C4 A B 502 -10.417 148.391 217.628 1.00 2.45 C
ATOM 24 P A B 503 -15.045 143.117 218.853 1.00 48.89 P
ATOM 25 OP1 A B 503 -14.832 142.524 220.184 1.00 48.89 O
ATOM 26 OP2 A B 503 -15.160 142.224 217.685 1.00 48.89 O
ATOM 27 O5' A B 503 -16.274 144.102 218.898 1.00 48.89 O
TER
ATOM 2 P G A 499 -5.096 153.741 226.024 1.00 7.91 P
ATOM 3 OP1 G A 499 -4.616 155.112 226.298 1.00 7.91 O
ATOM 4 OP2 G A 499 -5.662 152.940 227.143 1.00 7.91 O
ATOM 5 O5' G A 499 -6.118 153.798 224.824 1.00 7.91 O
ATOM 6 C5' G A 499 -6.259 154.984 224.081 1.00 7.91 C
ATOM 7 C4' G A 499 -7.458 154.915 223.204 1.00 7.91 C
ATOM 8 O4' G A 499 -7.463 153.649 222.508 1.00 7.91 O
ATOM 9 C3' G A 499 -8.781 154.940 223.924 1.00 7.91 C
ATOM 10 O3' G A 499 -9.188 156.241 224.269 1.00 7.91 O
ATOM 11 C2' G A 499 -9.704 154.244 222.943 1.00 7.91 C
ATOM 12 O2' G A 499 -10.071 155.105 221.879 1.00 7.91 O
ATOM 13 C1' G A 499 -8.778 153.163 222.406 1.00 7.91 C
ATOM 14 N9 G A 499 -8.877 151.962 223.220 1.00 8.00 N
ATOM 15 C8 G A 499 -8.124 151.628 224.302 1.00 8.00 C
ATOM 16 N7 G A 499 -8.534 150.509 224.827 1.00 8.00 N
ATOM 17 C5 G A 499 -9.615 150.119 224.051 1.00 8.00 C
ATOM 18 C6 G A 499 -10.449 149.001 224.138 1.00 8.00 C
ATOM 19 O6 G A 499 -10.401 148.096 224.946 1.00 8.00 O
ATOM 20 N1 G A 499 -11.410 149.004 223.155 1.00 8.00 N
ATOM 21 C2 G A 499 -11.556 149.977 222.195 1.00 8.00 C
ATOM 22 N2 G A 499 -12.566 149.808 221.322 1.00 8.00 N
ATOM 23 N3 G A 499 -10.777 151.040 222.090 1.00 8.00 N
ATOM 24 C4 G A 499 -9.842 151.024 223.053 1.00 8.00 C
ATOM 25 P A A 500 -9.614 156.548 225.771 1.00 0.40 P
ATOM 26 OP1 A A 500 -9.259 157.974 226.047 1.00 0.40 O
ATOM 27 OP2 A A 500 -9.012 155.459 226.618 1.00 0.40 O
ATOM 28 O5' A A 500 -11.203 156.376 225.727 1.00 0.40 O
TER
ATOM 1 O3' A B 501 -15.675 148.696 222.908 1.00 0.74 O
ATOM 2 P A B 502 -14.691 147.454 223.152 1.00 2.63 P
ATOM 3 OP1 A B 502 -15.526 146.311 223.540 1.00 2.63 O
ATOM 4 OP2 A B 502 -13.648 147.911 224.083 1.00 2.63 O
ATOM 5 O5' A B 502 -14.071 147.196 221.701 1.00 2.63 O
ATOM 6 C5' A B 502 -14.930 146.906 220.613 1.00 2.63 C
ATOM 7 C4' A B 502 -14.197 146.373 219.398 1.00 2.63 C
ATOM 8 O4' A B 502 -13.236 147.355 218.923 1.00 2.63 O
ATOM 9 C3' A B 502 -13.431 145.047 219.575 1.00 2.63 C
ATOM 10 O3' A B 502 -13.828 144.109 218.574 1.00 2.63 O
ATOM 11 C2' A B 502 -11.965 145.440 219.344 1.00 2.63 C
ATOM 12 O2' A B 502 -11.174 144.439 218.720 1.00 2.63 O
ATOM 13 C1' A B 502 -12.088 146.684 218.467 1.00 2.63 C
ATOM 14 N9 A B 502 -10.949 147.581 218.583 1.00 2.45 N
ATOM 15 C8 A B 502 -10.165 147.727 219.695 1.00 2.45 C
ATOM 16 N7 A B 502 -9.192 148.574 219.532 1.00 2.45 N
ATOM 17 C5 A B 502 -9.339 148.994 218.228 1.00 2.45 C
ATOM 18 C6 A B 502 -8.602 149.897 217.473 1.00 2.45 C
ATOM 19 N6 A B 502 -7.547 150.540 217.976 1.00 2.45 N
ATOM 20 N1 A B 502 -9.006 150.126 216.211 1.00 2.45 N
ATOM 21 C2 A B 502 -10.073 149.468 215.774 1.00 2.45 C
ATOM 22 N3 A B 502 -10.852 148.585 216.390 1.00 2.45 N
ATOM 23 C4 A B 502 -10.417 148.391 217.628 1.00 2.45 C
ATOM 24 P A B 503 -15.045 143.117 218.853 1.00 48.89 P
ATOM 25 OP1 A B 503 -14.832 142.524 220.184 1.00 48.89 O
ATOM 26 OP2 A B 503 -15.160 142.224 217.685 1.00 48.89 O
ATOM 27 O5' A B 503 -16.274 144.102 218.898 1.00 48.89 O
TER
Atoms:
OP1: (-4.616,155.112,226.298)
OP2: (-5.662,152.940,227.143)
C3': (-8.781,154.940,223.924)
C1': (-8.778,153.163,222.406)
C5': (-6.259,154.984,224.081)
O6: (-10.401,148.096,224.946)
O4': (-7.463,153.649,222.508)
C8: (-8.124,151.628,224.302)
C2: (-11.556,149.977,222.195)
C6: (-10.449,149.001,224.138)
C5: (-9.615,150.119,224.051)
C4: (-9.842,151.024,223.053)
P: (-5.096,153.741,226.024)
C4': (-7.458,154.915,223.204)
C2': (-9.704,154.244,222.943)
O2': (-10.071,155.105,221.879)
N1: (-11.410,149.004,223.155)
N2: (-12.566,149.808,221.322)
N3: (-10.777,151.040,222.090)
N7: (-8.534,150.509,224.827)
N9: (-8.877,151.962,223.220)
O5': (-6.118,153.798,224.824)
O3': (-9.188,156.241,224.269)
OP2: (-5.662,152.940,227.143)
C3': (-8.781,154.940,223.924)
C1': (-8.778,153.163,222.406)
C5': (-6.259,154.984,224.081)
O6: (-10.401,148.096,224.946)
O4': (-7.463,153.649,222.508)
C8: (-8.124,151.628,224.302)
C2: (-11.556,149.977,222.195)
C6: (-10.449,149.001,224.138)
C5: (-9.615,150.119,224.051)
C4: (-9.842,151.024,223.053)
P: (-5.096,153.741,226.024)
C4': (-7.458,154.915,223.204)
C2': (-9.704,154.244,222.943)
O2': (-10.071,155.105,221.879)
N1: (-11.410,149.004,223.155)
N2: (-12.566,149.808,221.322)
N3: (-10.777,151.040,222.090)
N7: (-8.534,150.509,224.827)
N9: (-8.877,151.962,223.220)
O5': (-6.118,153.798,224.824)
O3': (-9.188,156.241,224.269)
OP1: (-15.526,146.311,223.540)
OP2: (-13.648,147.911,224.083)
C3': (-13.431,145.047,219.575)
C1': (-12.088,146.684,218.467)
C5': (-14.930,146.906,220.613)
O4': (-13.236,147.355,218.923)
C8: (-10.165,147.727,219.695)
O2': (-11.174,144.439,218.720)
C6: (-8.602,149.897,217.473)
C5: (-9.339,148.994,218.228)
C4: (-10.417,148.391,217.628)
P: (-14.691,147.454,223.152)
C4': (-14.197,146.373,219.398)
C2': (-11.965,145.440,219.344)
C2: (-10.073,149.468,215.774)
N1: (-9.006,150.126,216.211)
N3: (-10.852,148.585,216.390)
N6: (-7.547,150.540,217.976)
N7: (-9.192,148.574,219.532)
N9: (-10.949,147.581,218.583)
O5': (-14.071,147.196,221.701)
O3': (-13.828,144.109,218.574)
OP2: (-13.648,147.911,224.083)
C3': (-13.431,145.047,219.575)
C1': (-12.088,146.684,218.467)
C5': (-14.930,146.906,220.613)
O4': (-13.236,147.355,218.923)
C8: (-10.165,147.727,219.695)
O2': (-11.174,144.439,218.720)
C6: (-8.602,149.897,217.473)
C5: (-9.339,148.994,218.228)
C4: (-10.417,148.391,217.628)
P: (-14.691,147.454,223.152)
C4': (-14.197,146.373,219.398)
C2': (-11.965,145.440,219.344)
C2: (-10.073,149.468,215.774)
N1: (-9.006,150.126,216.211)
N3: (-10.852,148.585,216.390)
N6: (-7.547,150.540,217.976)
N7: (-9.192,148.574,219.532)
N9: (-10.949,147.581,218.583)
O5': (-14.071,147.196,221.701)
O3': (-13.828,144.109,218.574)
Image (generated by PyMOL):