ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GID:A60:A36

Extra

PDB:
ATOM 1 O3' U A 59 46.284 77.890 72.966 1.00 28.05 O
ATOM 2 P G A 60 45.372 77.410 71.755 1.00 29.64 P
ATOM 3 OP1 G A 60 46.235 77.196 70.563 1.00 32.12 O
ATOM 4 OP2 G A 60 44.169 78.264 71.646 1.00 30.87 O
ATOM 5 O5' G A 60 44.952 76.001 72.303 1.00 23.13 O
ATOM 6 C5' G A 60 45.967 75.113 72.676 1.00 23.26 C
ATOM 7 C4' G A 60 45.382 74.028 73.495 1.00 26.64 C
ATOM 8 O4' G A 60 44.693 74.676 74.574 1.00 28.59 O
ATOM 9 C3' G A 60 44.295 73.254 72.795 1.00 26.20 C
ATOM 10 O3' G A 60 44.923 72.197 72.087 1.00 26.54 O
ATOM 11 C2' G A 60 43.507 72.730 73.981 1.00 27.99 C
ATOM 12 O2' G A 60 44.150 71.630 74.572 1.00 30.80 O
ATOM 13 C1' G A 60 43.591 73.904 74.950 1.00 28.36 C
ATOM 14 N9 G A 60 42.445 74.804 74.993 1.00 34.81 N
ATOM 15 C8 G A 60 42.273 75.957 74.259 1.00 38.89 C
ATOM 16 N7 G A 60 41.153 76.575 74.529 1.00 39.44 N
ATOM 17 C5 G A 60 40.547 75.778 75.495 1.00 38.17 C
ATOM 18 C6 G A 60 39.316 75.932 76.152 1.00 35.75 C
ATOM 19 O6 G A 60 38.476 76.834 76.008 1.00 40.16 O
ATOM 20 N1 G A 60 39.086 74.893 77.048 1.00 29.30 N
ATOM 21 C2 G A 60 39.930 73.844 77.276 1.00 29.23 C
ATOM 22 N2 G A 60 39.520 72.946 78.171 1.00 26.01 N
ATOM 23 N3 G A 60 41.081 73.685 76.671 1.00 34.95 N
ATOM 24 C4 G A 60 41.327 74.682 75.792 1.00 37.09 C
ATOM 25 P G A 61 44.256 71.606 70.757 1.00 24.50 P
ATOM 26 OP1 G A 61 45.131 70.508 70.292 1.00 23.70 O
ATOM 27 OP2 G A 61 43.897 72.691 69.846 1.00 26.01 O
ATOM 28 O5' G A 61 42.912 70.958 71.260 1.00 23.23 O
TER

ATOM 1 O3' C B 35 34.776 73.888 78.074 1.00 31.31 O
ATOM 2 P A B 36 35.749 74.331 79.259 1.00 37.74 P
ATOM 3 OP1 A B 36 35.168 75.472 79.991 1.00 31.21 O
ATOM 4 OP2 A B 36 37.114 74.433 78.702 1.00 39.44 O
ATOM 5 O5' A B 36 35.808 73.068 80.205 1.00 35.32 O
ATOM 6 C5' A B 36 34.711 72.689 80.965 1.00 29.64 C
ATOM 7 C4' A B 36 34.818 71.230 81.259 1.00 25.08 C
ATOM 8 O4' A B 36 34.415 70.507 80.077 1.00 25.95 O
ATOM 9 C3' A B 36 36.227 70.757 81.569 1.00 21.04 C
ATOM 10 O3' A B 36 36.455 70.847 82.968 1.00 26.71 O
ATOM 11 C2' A B 36 36.152 69.316 81.113 1.00 22.77 C
ATOM 12 O2' A B 36 35.458 68.517 82.032 1.00 26.75 O
ATOM 13 C1' A B 36 35.323 69.461 79.841 1.00 25.84 C
ATOM 14 N9 A B 36 36.100 69.841 78.668 1.00 29.86 N
ATOM 15 C8 A B 36 35.884 70.947 77.886 1.00 32.37 C
ATOM 16 N7 A B 36 36.720 71.053 76.878 1.00 34.07 N
ATOM 17 C5 A B 36 37.547 69.942 77.011 1.00 30.66 C
ATOM 18 C6 A B 36 38.642 69.480 76.254 1.00 28.27 C
ATOM 19 N6 A B 36 39.104 70.111 75.174 1.00 25.66 N
ATOM 20 N1 A B 36 39.249 68.340 76.651 1.00 30.42 N
ATOM 21 C2 A B 36 38.781 67.713 77.743 1.00 30.95 C
ATOM 22 N3 A B 36 37.761 68.048 78.536 1.00 31.25 N
ATOM 23 C4 A B 36 37.178 69.186 78.109 1.00 29.71 C
ATOM 24 P A B 37 37.904 71.270 83.535 1.00 31.83 P
ATOM 25 OP1 A B 37 37.869 71.285 85.020 1.00 29.17 O
ATOM 26 OP2 A B 37 38.399 72.468 82.808 1.00 31.65 O
ATOM 27 O5' A B 37 38.799 70.022 83.173 1.00 29.82 O
TER

Atoms:
OP1: (46.235,77.196,70.563)
OP2: (44.169,78.264,71.646)
C3': (44.295,73.254,72.795)
C1': (43.591,73.904,74.950)
C5': (45.967,75.113,72.676)
O6: (38.476,76.834,76.008)
O4': (44.693,74.676,74.574)
C8: (42.273,75.957,74.259)
C2: (39.930,73.844,77.276)
C6: (39.316,75.932,76.152)
C5: (40.547,75.778,75.495)
C4: (41.327,74.682,75.792)
P: (45.372,77.410,71.755)
C4': (45.382,74.028,73.495)
C2': (43.507,72.730,73.981)
O2': (44.150,71.630,74.572)
N1: (39.086,74.893,77.048)
N2: (39.520,72.946,78.171)
N3: (41.081,73.685,76.671)
N7: (41.153,76.575,74.529)
N9: (42.445,74.804,74.993)
O5': (44.952,76.001,72.303)
O3': (44.923,72.197,72.087)
OP1: (35.168,75.472,79.991)
OP2: (37.114,74.433,78.702)
C3': (36.227,70.757,81.569)
C1': (35.323,69.461,79.841)
C5': (34.711,72.689,80.965)
O4': (34.415,70.507,80.077)
C8: (35.884,70.947,77.886)
O2': (35.458,68.517,82.032)
C6: (38.642,69.480,76.254)
C5: (37.547,69.942,77.011)
C4: (37.178,69.186,78.109)
P: (35.749,74.331,79.259)
C4': (34.818,71.230,81.259)
C2': (36.152,69.316,81.113)
C2: (38.781,67.713,77.743)
N1: (39.249,68.340,76.651)
N3: (37.761,68.048,78.536)
N6: (39.104,70.111,75.174)
N7: (36.720,71.053,76.878)
N9: (36.100,69.841,78.668)
O5': (35.808,73.068,80.205)
O3': (36.455,70.847,82.968)
Image (generated by PyMOL):
PyMOL image
show in jmol