ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HOO:A31:A34

Extra

PDB:
ATOM 1 O3' U A 30 9.234 31.586 53.215 1.00 77.33 O
ATOM 2 P G A 31 9.444 31.504 54.798 1.00 77.86 P
ATOM 3 OP1 G A 31 8.197 32.001 55.449 1.00 78.45 O
ATOM 4 OP2 G A 31 10.758 32.142 55.116 1.00 79.08 O
ATOM 5 O5' G A 31 9.564 29.939 55.072 1.00 76.49 O
ATOM 6 C5' G A 31 8.400 29.155 55.317 1.00 71.32 C
ATOM 7 C4' G A 31 8.790 27.799 55.837 1.00 65.74 C
ATOM 8 O4' G A 31 9.636 27.166 54.842 1.00 63.76 O
ATOM 9 C3' G A 31 9.632 27.789 57.103 1.00 63.49 C
ATOM 10 O3' G A 31 8.799 27.873 58.265 1.00 66.40 O
ATOM 11 C2' G A 31 10.324 26.433 57.000 1.00 61.20 C
ATOM 12 O2' G A 31 9.503 25.381 57.456 1.00 58.69 O
ATOM 13 C1' G A 31 10.567 26.312 55.484 1.00 60.91 C
ATOM 14 N9 G A 31 11.911 26.727 55.096 1.00 51.57 N
ATOM 15 C8 G A 31 12.309 28.005 54.833 1.00 49.75 C
ATOM 16 N7 G A 31 13.595 28.114 54.650 1.00 57.70 N
ATOM 17 C5 G A 31 14.075 26.820 54.765 1.00 57.52 C
ATOM 18 C6 G A 31 15.412 26.320 54.680 1.00 63.00 C
ATOM 19 O6 G A 31 16.464 26.949 54.489 1.00 65.07 O
ATOM 20 N1 G A 31 15.454 24.941 54.852 1.00 61.90 N
ATOM 21 C2 G A 31 14.360 24.147 55.080 1.00 64.56 C
ATOM 22 N2 G A 31 14.617 22.844 55.218 1.00 64.87 N
ATOM 23 N3 G A 31 13.107 24.599 55.166 1.00 62.80 N
ATOM 24 C4 G A 31 13.044 25.941 55.004 1.00 56.42 C
ATOM 25 P A A 32 9.356 28.575 59.616 1.00 65.18 P
ATOM 26 OP1 A A 32 8.210 28.890 60.520 1.00 56.24 O
ATOM 27 OP2 A A 32 10.250 29.668 59.145 1.00 64.97 O
ATOM 28 O5' A A 32 10.238 27.452 60.325 1.00 54.68 O
TER

ATOM 1 O3' G B 33 17.423 22.275 57.459 1.00 71.03 O
ATOM 2 P A B 34 17.943 22.309 55.933 1.00 73.64 P
ATOM 3 OP1 A B 34 19.304 21.727 55.948 1.00 72.86 O
ATOM 4 OP2 A B 34 17.729 23.672 55.370 1.00 69.88 O
ATOM 5 O5' A B 34 16.976 21.305 55.158 1.00 75.74 O
ATOM 6 C5' A B 34 17.434 20.037 54.669 1.00 74.37 C
ATOM 7 C4' A B 34 17.185 19.940 53.181 1.00 73.53 C
ATOM 8 O4' A B 34 15.860 20.431 52.911 1.00 70.40 O
ATOM 9 C3' A B 34 18.109 20.802 52.320 1.00 78.33 C
ATOM 10 O3' A B 34 19.077 19.957 51.706 1.00 85.12 O
ATOM 11 C2' A B 34 17.234 21.320 51.173 1.00 75.26 C
ATOM 12 O2' A B 34 17.567 20.791 49.910 1.00 78.93 O
ATOM 13 C1' A B 34 15.827 20.882 51.585 1.00 73.11 C
ATOM 14 N9 A B 34 14.778 21.874 51.413 1.00 67.62 N
ATOM 15 C8 A B 34 14.851 23.236 51.497 1.00 71.59 C
ATOM 16 N7 A B 34 13.731 23.841 51.191 1.00 72.82 N
ATOM 17 C5 A B 34 12.859 22.802 50.909 1.00 63.79 C
ATOM 18 C6 A B 34 11.518 22.780 50.519 1.00 64.40 C
ATOM 19 N6 A B 34 10.779 23.878 50.338 1.00 65.06 N
ATOM 20 N1 A B 34 10.946 21.577 50.318 1.00 64.74 N
ATOM 21 C2 A B 34 11.685 20.478 50.501 1.00 64.73 C
ATOM 22 N3 A B 34 12.953 20.372 50.867 1.00 62.87 N
ATOM 23 C4 A B 34 13.488 21.587 51.058 1.00 63.18 C
ATOM 24 P A B 35 20.450 19.615 52.450 1.00 91.42 P
ATOM 25 OP1 A B 35 21.247 20.858 52.584 1.00 94.37 O
ATOM 26 OP2 A B 35 21.009 18.451 51.718 1.00 92.94 O
ATOM 27 O5' A B 35 20.026 19.136 53.903 1.00 94.72 O
TER

Atoms:
OP1: (8.197,32.001,55.449)
OP2: (10.758,32.142,55.116)
C3': (9.632,27.789,57.103)
C1': (10.567,26.312,55.484)
C5': (8.400,29.155,55.317)
O6: (16.464,26.949,54.489)
O4': (9.636,27.166,54.842)
C8: (12.309,28.005,54.833)
C2: (14.360,24.147,55.080)
C6: (15.412,26.320,54.680)
C5: (14.075,26.820,54.765)
C4: (13.044,25.941,55.004)
P: (9.444,31.504,54.798)
C4': (8.790,27.799,55.837)
C2': (10.324,26.433,57.000)
O2': (9.503,25.381,57.456)
N1: (15.454,24.941,54.852)
N2: (14.617,22.844,55.218)
N3: (13.107,24.599,55.166)
N7: (13.595,28.114,54.650)
N9: (11.911,26.727,55.096)
O5': (9.564,29.939,55.072)
O3': (8.799,27.873,58.265)
OP1: (19.304,21.727,55.948)
OP2: (17.729,23.672,55.370)
C3': (18.109,20.802,52.320)
C1': (15.827,20.882,51.585)
C5': (17.434,20.037,54.669)
O4': (15.860,20.431,52.911)
C8: (14.851,23.236,51.497)
O2': (17.567,20.791,49.910)
C6: (11.518,22.780,50.519)
C5: (12.859,22.802,50.909)
C4: (13.488,21.587,51.058)
P: (17.943,22.309,55.933)
C4': (17.185,19.940,53.181)
C2': (17.234,21.320,51.173)
C2: (11.685,20.478,50.501)
N1: (10.946,21.577,50.318)
N3: (12.953,20.372,50.867)
N6: (10.779,23.878,50.338)
N7: (13.731,23.841,51.191)
N9: (14.778,21.874,51.413)
O5': (16.976,21.305,55.158)
O3': (19.077,19.957,51.706)
Image (generated by PyMOL):
PyMOL image
show in jmol