Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:0576:0557
Extra
PDB:
ATOM 1 O3' A A 575 -9.230 86.766 109.912 1.00 85.84 O
ATOM 2 P G A 576 -9.122 85.229 109.517 1.00 88.73 P
ATOM 3 OP1 G A 576 -10.501 84.691 109.459 1.00 89.54 O
ATOM 4 OP2 G A 576 -8.123 84.607 110.425 1.00 88.34 O
ATOM 5 O5' G A 576 -8.537 85.293 108.034 1.00 89.25 O
ATOM 6 C5' G A 576 -7.210 85.818 107.783 1.00 87.72 C
ATOM 7 C4' G A 576 -7.228 87.338 107.719 1.00 85.03 C
ATOM 8 O4' G A 576 -6.014 87.839 108.328 1.00 84.20 O
ATOM 9 C3' G A 576 -7.290 88.009 106.348 1.00 82.59 C
ATOM 10 O3' G A 576 -7.855 89.313 106.572 1.00 80.66 O
ATOM 11 C2' G A 576 -5.810 88.094 106.003 1.00 82.15 C
ATOM 12 O2' G A 576 -5.496 89.054 105.025 1.00 83.82 O
ATOM 13 C1' G A 576 -5.234 88.499 107.356 1.00 82.27 C
ATOM 14 N9 G A 576 -3.848 88.135 107.603 1.00 80.44 N
ATOM 15 C8 G A 576 -3.148 87.081 107.075 1.00 79.34 C
ATOM 16 N7 G A 576 -1.935 86.989 107.545 1.00 79.12 N
ATOM 17 C5 G A 576 -1.828 88.057 108.424 1.00 80.13 C
ATOM 18 C6 G A 576 -0.746 88.473 109.239 1.00 81.08 C
ATOM 19 O6 G A 576 0.370 87.963 109.351 1.00 81.94 O
ATOM 20 N1 G A 576 -1.066 89.608 109.978 1.00 80.51 N
ATOM 21 C2 G A 576 -2.269 90.259 109.937 1.00 79.88 C
ATOM 22 N2 G A 576 -2.379 91.337 110.717 1.00 80.03 N
ATOM 23 N3 G A 576 -3.286 89.881 109.185 1.00 79.70 N
ATOM 24 C4 G A 576 -2.996 88.779 108.460 1.00 80.04 C
ATOM 25 P U A 577 -8.058 90.352 105.356 1.00 78.96 P
ATOM 26 OP1 U A 577 -8.649 89.649 104.189 1.00 79.08 O
ATOM 27 OP2 U A 577 -6.812 91.119 105.188 1.00 79.87 O
ATOM 28 O5' U A 577 -9.134 91.379 105.920 1.00 78.54 O
TER
ATOM 1 O3' G B 556 0.416 94.271 112.182 1.00 62.51 O
ATOM 2 P A B 557 -0.093 93.088 113.130 1.00 65.17 P
ATOM 3 OP1 A B 557 0.523 93.304 114.456 1.00 66.17 O
ATOM 4 OP2 A B 557 0.075 91.781 112.441 1.00 64.54 O
ATOM 5 O5' A B 557 -1.648 93.364 113.259 1.00 65.64 O
ATOM 6 C5' A B 557 -2.233 93.609 114.535 1.00 66.27 C
ATOM 7 C4' A B 557 -2.264 95.079 114.790 1.00 66.77 C
ATOM 8 O4' A B 557 -2.823 95.725 113.626 1.00 66.98 O
ATOM 9 C3' A B 557 -3.166 95.499 115.928 1.00 68.59 C
ATOM 10 O3' A B 557 -2.529 95.374 117.183 1.00 72.09 O
ATOM 11 C2' A B 557 -3.513 96.928 115.547 1.00 68.92 C
ATOM 12 O2' A B 557 -2.489 97.861 115.824 1.00 68.17 O
ATOM 13 C1' A B 557 -3.672 96.780 114.035 1.00 68.77 C
ATOM 14 N9 A B 557 -5.041 96.419 113.675 1.00 68.91 N
ATOM 15 C8 A B 557 -5.510 95.299 113.031 1.00 68.93 C
ATOM 16 N7 A B 557 -6.808 95.297 112.857 1.00 68.52 N
ATOM 17 C5 A B 557 -7.218 96.495 113.426 1.00 69.62 C
ATOM 18 C6 A B 557 -8.477 97.093 113.562 1.00 71.10 C
ATOM 19 N6 A B 557 -9.608 96.551 113.106 1.00 72.00 N
ATOM 20 N1 A B 557 -8.539 98.289 114.191 1.00 71.61 N
ATOM 21 C2 A B 557 -7.402 98.837 114.640 1.00 70.65 C
ATOM 22 N3 A B 557 -6.162 98.375 114.565 1.00 68.75 N
ATOM 23 C4 A B 557 -6.141 97.189 113.939 1.00 68.85 C
ATOM 24 P C B 558 -3.414 95.081 118.482 1.00 73.56 P
ATOM 25 OP1 C B 558 -2.515 94.720 119.595 1.00 74.75 O
ATOM 26 OP2 C B 558 -4.493 94.153 118.075 1.00 72.73 O
ATOM 27 O5' C B 558 -4.018 96.504 118.837 1.00 75.97 O
TER
ATOM 2 P G A 576 -9.122 85.229 109.517 1.00 88.73 P
ATOM 3 OP1 G A 576 -10.501 84.691 109.459 1.00 89.54 O
ATOM 4 OP2 G A 576 -8.123 84.607 110.425 1.00 88.34 O
ATOM 5 O5' G A 576 -8.537 85.293 108.034 1.00 89.25 O
ATOM 6 C5' G A 576 -7.210 85.818 107.783 1.00 87.72 C
ATOM 7 C4' G A 576 -7.228 87.338 107.719 1.00 85.03 C
ATOM 8 O4' G A 576 -6.014 87.839 108.328 1.00 84.20 O
ATOM 9 C3' G A 576 -7.290 88.009 106.348 1.00 82.59 C
ATOM 10 O3' G A 576 -7.855 89.313 106.572 1.00 80.66 O
ATOM 11 C2' G A 576 -5.810 88.094 106.003 1.00 82.15 C
ATOM 12 O2' G A 576 -5.496 89.054 105.025 1.00 83.82 O
ATOM 13 C1' G A 576 -5.234 88.499 107.356 1.00 82.27 C
ATOM 14 N9 G A 576 -3.848 88.135 107.603 1.00 80.44 N
ATOM 15 C8 G A 576 -3.148 87.081 107.075 1.00 79.34 C
ATOM 16 N7 G A 576 -1.935 86.989 107.545 1.00 79.12 N
ATOM 17 C5 G A 576 -1.828 88.057 108.424 1.00 80.13 C
ATOM 18 C6 G A 576 -0.746 88.473 109.239 1.00 81.08 C
ATOM 19 O6 G A 576 0.370 87.963 109.351 1.00 81.94 O
ATOM 20 N1 G A 576 -1.066 89.608 109.978 1.00 80.51 N
ATOM 21 C2 G A 576 -2.269 90.259 109.937 1.00 79.88 C
ATOM 22 N2 G A 576 -2.379 91.337 110.717 1.00 80.03 N
ATOM 23 N3 G A 576 -3.286 89.881 109.185 1.00 79.70 N
ATOM 24 C4 G A 576 -2.996 88.779 108.460 1.00 80.04 C
ATOM 25 P U A 577 -8.058 90.352 105.356 1.00 78.96 P
ATOM 26 OP1 U A 577 -8.649 89.649 104.189 1.00 79.08 O
ATOM 27 OP2 U A 577 -6.812 91.119 105.188 1.00 79.87 O
ATOM 28 O5' U A 577 -9.134 91.379 105.920 1.00 78.54 O
TER
ATOM 1 O3' G B 556 0.416 94.271 112.182 1.00 62.51 O
ATOM 2 P A B 557 -0.093 93.088 113.130 1.00 65.17 P
ATOM 3 OP1 A B 557 0.523 93.304 114.456 1.00 66.17 O
ATOM 4 OP2 A B 557 0.075 91.781 112.441 1.00 64.54 O
ATOM 5 O5' A B 557 -1.648 93.364 113.259 1.00 65.64 O
ATOM 6 C5' A B 557 -2.233 93.609 114.535 1.00 66.27 C
ATOM 7 C4' A B 557 -2.264 95.079 114.790 1.00 66.77 C
ATOM 8 O4' A B 557 -2.823 95.725 113.626 1.00 66.98 O
ATOM 9 C3' A B 557 -3.166 95.499 115.928 1.00 68.59 C
ATOM 10 O3' A B 557 -2.529 95.374 117.183 1.00 72.09 O
ATOM 11 C2' A B 557 -3.513 96.928 115.547 1.00 68.92 C
ATOM 12 O2' A B 557 -2.489 97.861 115.824 1.00 68.17 O
ATOM 13 C1' A B 557 -3.672 96.780 114.035 1.00 68.77 C
ATOM 14 N9 A B 557 -5.041 96.419 113.675 1.00 68.91 N
ATOM 15 C8 A B 557 -5.510 95.299 113.031 1.00 68.93 C
ATOM 16 N7 A B 557 -6.808 95.297 112.857 1.00 68.52 N
ATOM 17 C5 A B 557 -7.218 96.495 113.426 1.00 69.62 C
ATOM 18 C6 A B 557 -8.477 97.093 113.562 1.00 71.10 C
ATOM 19 N6 A B 557 -9.608 96.551 113.106 1.00 72.00 N
ATOM 20 N1 A B 557 -8.539 98.289 114.191 1.00 71.61 N
ATOM 21 C2 A B 557 -7.402 98.837 114.640 1.00 70.65 C
ATOM 22 N3 A B 557 -6.162 98.375 114.565 1.00 68.75 N
ATOM 23 C4 A B 557 -6.141 97.189 113.939 1.00 68.85 C
ATOM 24 P C B 558 -3.414 95.081 118.482 1.00 73.56 P
ATOM 25 OP1 C B 558 -2.515 94.720 119.595 1.00 74.75 O
ATOM 26 OP2 C B 558 -4.493 94.153 118.075 1.00 72.73 O
ATOM 27 O5' C B 558 -4.018 96.504 118.837 1.00 75.97 O
TER
Atoms:
OP1: (-10.501,84.691,109.459)
OP2: (-8.123,84.607,110.425)
C3': (-7.290,88.009,106.348)
C1': (-5.234,88.499,107.356)
C5': (-7.210,85.818,107.783)
O6: (0.370,87.963,109.351)
O4': (-6.014,87.839,108.328)
C8: (-3.148,87.081,107.075)
C2: (-2.269,90.259,109.937)
C6: (-0.746,88.473,109.239)
C5: (-1.828,88.057,108.424)
C4: (-2.996,88.779,108.460)
P: (-9.122,85.229,109.517)
C4': (-7.228,87.338,107.719)
C2': (-5.810,88.094,106.003)
O2': (-5.496,89.054,105.025)
N1: (-1.066,89.608,109.978)
N2: (-2.379,91.337,110.717)
N3: (-3.286,89.881,109.185)
N7: (-1.935,86.989,107.545)
N9: (-3.848,88.135,107.603)
O5': (-8.537,85.293,108.034)
O3': (-7.855,89.313,106.572)
OP2: (-8.123,84.607,110.425)
C3': (-7.290,88.009,106.348)
C1': (-5.234,88.499,107.356)
C5': (-7.210,85.818,107.783)
O6: (0.370,87.963,109.351)
O4': (-6.014,87.839,108.328)
C8: (-3.148,87.081,107.075)
C2: (-2.269,90.259,109.937)
C6: (-0.746,88.473,109.239)
C5: (-1.828,88.057,108.424)
C4: (-2.996,88.779,108.460)
P: (-9.122,85.229,109.517)
C4': (-7.228,87.338,107.719)
C2': (-5.810,88.094,106.003)
O2': (-5.496,89.054,105.025)
N1: (-1.066,89.608,109.978)
N2: (-2.379,91.337,110.717)
N3: (-3.286,89.881,109.185)
N7: (-1.935,86.989,107.545)
N9: (-3.848,88.135,107.603)
O5': (-8.537,85.293,108.034)
O3': (-7.855,89.313,106.572)
OP1: (0.523,93.304,114.456)
OP2: (0.075,91.781,112.441)
C3': (-3.166,95.499,115.928)
C1': (-3.672,96.780,114.035)
C5': (-2.233,93.609,114.535)
O4': (-2.823,95.725,113.626)
C8: (-5.510,95.299,113.031)
O2': (-2.489,97.861,115.824)
C6: (-8.477,97.093,113.562)
C5: (-7.218,96.495,113.426)
C4: (-6.141,97.189,113.939)
P: (-0.093,93.088,113.130)
C4': (-2.264,95.079,114.790)
C2': (-3.513,96.928,115.547)
C2: (-7.402,98.837,114.640)
N1: (-8.539,98.289,114.191)
N3: (-6.162,98.375,114.565)
N6: (-9.608,96.551,113.106)
N7: (-6.808,95.297,112.857)
N9: (-5.041,96.419,113.675)
O5': (-1.648,93.364,113.259)
O3': (-2.529,95.374,117.183)
OP2: (0.075,91.781,112.441)
C3': (-3.166,95.499,115.928)
C1': (-3.672,96.780,114.035)
C5': (-2.233,93.609,114.535)
O4': (-2.823,95.725,113.626)
C8: (-5.510,95.299,113.031)
O2': (-2.489,97.861,115.824)
C6: (-8.477,97.093,113.562)
C5: (-7.218,96.495,113.426)
C4: (-6.141,97.189,113.939)
P: (-0.093,93.088,113.130)
C4': (-2.264,95.079,114.790)
C2': (-3.513,96.928,115.547)
C2: (-7.402,98.837,114.640)
N1: (-8.539,98.289,114.191)
N3: (-6.162,98.375,114.565)
N6: (-9.608,96.551,113.106)
N7: (-6.808,95.297,112.857)
N9: (-5.041,96.419,113.675)
O5': (-1.648,93.364,113.259)
O3': (-2.529,95.374,117.183)
Image (generated by PyMOL):