Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02016:02020
Extra
PDB:
ATOM 1 O3' U A2015 42.355 108.555 109.798 1.00 30.30 O
ATOM 2 P G A2016 43.618 107.915 109.055 1.00 30.24 P
ATOM 3 OP1 G A2016 43.377 106.459 108.905 1.00 30.39 O
ATOM 4 OP2 G A2016 44.841 108.386 109.754 1.00 31.25 O
ATOM 5 O5' G A2016 43.573 108.576 107.612 1.00 29.57 O
ATOM 6 C5' G A2016 42.433 108.408 106.761 1.00 29.15 C
ATOM 7 C4' G A2016 42.511 109.372 105.610 1.00 28.72 C
ATOM 8 O4' G A2016 42.440 110.726 106.121 1.00 28.98 O
ATOM 9 C3' G A2016 43.815 109.324 104.837 1.00 28.22 C
ATOM 10 O3' G A2016 43.770 108.298 103.855 1.00 30.13 O
ATOM 11 C2' G A2016 43.872 110.712 104.223 1.00 28.94 C
ATOM 12 O2' G A2016 43.041 110.824 103.088 1.00 27.74 O
ATOM 13 C1' G A2016 43.287 111.565 105.355 1.00 31.02 C
ATOM 14 N9 G A2016 44.293 112.159 106.240 1.00 32.75 N
ATOM 15 C8 G A2016 44.823 111.618 107.387 1.00 32.65 C
ATOM 16 N7 G A2016 45.724 112.380 107.945 1.00 32.53 N
ATOM 17 C5 G A2016 45.794 113.494 107.121 1.00 32.76 C
ATOM 18 C6 G A2016 46.604 114.649 107.207 1.00 34.03 C
ATOM 19 O6 G A2016 47.466 114.930 108.052 1.00 36.63 O
ATOM 20 N1 G A2016 46.342 115.530 106.168 1.00 33.97 N
ATOM 21 C2 G A2016 45.430 115.327 105.170 1.00 32.68 C
ATOM 22 N2 G A2016 45.322 116.300 104.260 1.00 34.44 N
ATOM 23 N3 G A2016 44.680 114.253 105.070 1.00 32.29 N
ATOM 24 C4 G A2016 44.910 113.382 106.072 1.00 32.59 C
ATOM 25 P C A2017 45.001 107.275 103.701 1.00 31.85 P
ATOM 26 OP1 C A2017 44.544 106.212 102.772 1.00 30.38 O
ATOM 27 OP2 C A2017 45.499 106.898 105.063 1.00 31.14 O
ATOM 28 O5' C A2017 46.113 108.141 102.961 1.00 30.07 O
TER
ATOM 1 O3' G B2019 49.927 118.589 105.392 1.00 32.46 O
ATOM 2 P A B2020 48.354 118.535 105.101 1.00 31.48 P
ATOM 3 OP1 A B2020 47.725 118.008 106.344 1.00 29.25 O
ATOM 4 OP2 A B2020 48.122 117.844 103.816 1.00 30.70 O
ATOM 5 O5' A B2020 47.953 120.061 104.889 1.00 30.70 O
ATOM 6 C5' A B2020 47.261 120.805 105.905 1.00 31.25 C
ATOM 7 C4' A B2020 45.901 121.219 105.402 1.00 32.27 C
ATOM 8 O4' A B2020 45.114 120.027 105.119 1.00 32.41 O
ATOM 9 C3' A B2020 45.063 122.040 106.375 1.00 34.05 C
ATOM 10 O3' A B2020 44.234 122.924 105.619 1.00 36.32 O
ATOM 11 C2' A B2020 44.181 120.974 107.015 1.00 34.45 C
ATOM 12 O2' A B2020 42.999 121.490 107.591 1.00 36.66 O
ATOM 13 C1' A B2020 43.879 120.118 105.791 1.00 33.21 C
ATOM 14 N9 A B2020 43.338 118.773 105.993 1.00 32.15 N
ATOM 15 C8 A B2020 43.706 117.794 106.880 1.00 32.60 C
ATOM 16 N7 A B2020 43.002 116.694 106.776 1.00 31.98 N
ATOM 17 C5 A B2020 42.108 116.969 105.750 1.00 33.29 C
ATOM 18 C6 A B2020 41.080 116.205 105.141 1.00 33.50 C
ATOM 19 N6 A B2020 40.756 114.958 105.496 1.00 30.54 N
ATOM 20 N1 A B2020 40.385 116.783 104.139 1.00 34.63 N
ATOM 21 C2 A B2020 40.693 118.035 103.783 1.00 35.30 C
ATOM 22 N3 A B2020 41.624 118.849 104.276 1.00 34.59 N
ATOM 23 C4 A B2020 42.304 118.248 105.264 1.00 32.81 C
ATOM 24 P G B2021 44.767 124.389 105.222 1.00 38.92 P
ATOM 25 OP1 G B2021 44.914 124.409 103.737 1.00 37.08 O
ATOM 26 OP2 G B2021 45.924 124.754 106.082 1.00 39.42 O
ATOM 27 O5' G B2021 43.573 125.352 105.635 1.00 34.51 O
TER
ATOM 2 P G A2016 43.618 107.915 109.055 1.00 30.24 P
ATOM 3 OP1 G A2016 43.377 106.459 108.905 1.00 30.39 O
ATOM 4 OP2 G A2016 44.841 108.386 109.754 1.00 31.25 O
ATOM 5 O5' G A2016 43.573 108.576 107.612 1.00 29.57 O
ATOM 6 C5' G A2016 42.433 108.408 106.761 1.00 29.15 C
ATOM 7 C4' G A2016 42.511 109.372 105.610 1.00 28.72 C
ATOM 8 O4' G A2016 42.440 110.726 106.121 1.00 28.98 O
ATOM 9 C3' G A2016 43.815 109.324 104.837 1.00 28.22 C
ATOM 10 O3' G A2016 43.770 108.298 103.855 1.00 30.13 O
ATOM 11 C2' G A2016 43.872 110.712 104.223 1.00 28.94 C
ATOM 12 O2' G A2016 43.041 110.824 103.088 1.00 27.74 O
ATOM 13 C1' G A2016 43.287 111.565 105.355 1.00 31.02 C
ATOM 14 N9 G A2016 44.293 112.159 106.240 1.00 32.75 N
ATOM 15 C8 G A2016 44.823 111.618 107.387 1.00 32.65 C
ATOM 16 N7 G A2016 45.724 112.380 107.945 1.00 32.53 N
ATOM 17 C5 G A2016 45.794 113.494 107.121 1.00 32.76 C
ATOM 18 C6 G A2016 46.604 114.649 107.207 1.00 34.03 C
ATOM 19 O6 G A2016 47.466 114.930 108.052 1.00 36.63 O
ATOM 20 N1 G A2016 46.342 115.530 106.168 1.00 33.97 N
ATOM 21 C2 G A2016 45.430 115.327 105.170 1.00 32.68 C
ATOM 22 N2 G A2016 45.322 116.300 104.260 1.00 34.44 N
ATOM 23 N3 G A2016 44.680 114.253 105.070 1.00 32.29 N
ATOM 24 C4 G A2016 44.910 113.382 106.072 1.00 32.59 C
ATOM 25 P C A2017 45.001 107.275 103.701 1.00 31.85 P
ATOM 26 OP1 C A2017 44.544 106.212 102.772 1.00 30.38 O
ATOM 27 OP2 C A2017 45.499 106.898 105.063 1.00 31.14 O
ATOM 28 O5' C A2017 46.113 108.141 102.961 1.00 30.07 O
TER
ATOM 1 O3' G B2019 49.927 118.589 105.392 1.00 32.46 O
ATOM 2 P A B2020 48.354 118.535 105.101 1.00 31.48 P
ATOM 3 OP1 A B2020 47.725 118.008 106.344 1.00 29.25 O
ATOM 4 OP2 A B2020 48.122 117.844 103.816 1.00 30.70 O
ATOM 5 O5' A B2020 47.953 120.061 104.889 1.00 30.70 O
ATOM 6 C5' A B2020 47.261 120.805 105.905 1.00 31.25 C
ATOM 7 C4' A B2020 45.901 121.219 105.402 1.00 32.27 C
ATOM 8 O4' A B2020 45.114 120.027 105.119 1.00 32.41 O
ATOM 9 C3' A B2020 45.063 122.040 106.375 1.00 34.05 C
ATOM 10 O3' A B2020 44.234 122.924 105.619 1.00 36.32 O
ATOM 11 C2' A B2020 44.181 120.974 107.015 1.00 34.45 C
ATOM 12 O2' A B2020 42.999 121.490 107.591 1.00 36.66 O
ATOM 13 C1' A B2020 43.879 120.118 105.791 1.00 33.21 C
ATOM 14 N9 A B2020 43.338 118.773 105.993 1.00 32.15 N
ATOM 15 C8 A B2020 43.706 117.794 106.880 1.00 32.60 C
ATOM 16 N7 A B2020 43.002 116.694 106.776 1.00 31.98 N
ATOM 17 C5 A B2020 42.108 116.969 105.750 1.00 33.29 C
ATOM 18 C6 A B2020 41.080 116.205 105.141 1.00 33.50 C
ATOM 19 N6 A B2020 40.756 114.958 105.496 1.00 30.54 N
ATOM 20 N1 A B2020 40.385 116.783 104.139 1.00 34.63 N
ATOM 21 C2 A B2020 40.693 118.035 103.783 1.00 35.30 C
ATOM 22 N3 A B2020 41.624 118.849 104.276 1.00 34.59 N
ATOM 23 C4 A B2020 42.304 118.248 105.264 1.00 32.81 C
ATOM 24 P G B2021 44.767 124.389 105.222 1.00 38.92 P
ATOM 25 OP1 G B2021 44.914 124.409 103.737 1.00 37.08 O
ATOM 26 OP2 G B2021 45.924 124.754 106.082 1.00 39.42 O
ATOM 27 O5' G B2021 43.573 125.352 105.635 1.00 34.51 O
TER
Atoms:
OP1: (43.377,106.459,108.905)
OP2: (44.841,108.386,109.754)
C3': (43.815,109.324,104.837)
C1': (43.287,111.565,105.355)
C5': (42.433,108.408,106.761)
O6: (47.466,114.930,108.052)
O4': (42.440,110.726,106.121)
C8: (44.823,111.618,107.387)
C2: (45.430,115.327,105.170)
C6: (46.604,114.649,107.207)
C5: (45.794,113.494,107.121)
C4: (44.910,113.382,106.072)
P: (43.618,107.915,109.055)
C4': (42.511,109.372,105.610)
C2': (43.872,110.712,104.223)
O2': (43.041,110.824,103.088)
N1: (46.342,115.530,106.168)
N2: (45.322,116.300,104.260)
N3: (44.680,114.253,105.070)
N7: (45.724,112.380,107.945)
N9: (44.293,112.159,106.240)
O5': (43.573,108.576,107.612)
O3': (43.770,108.298,103.855)
OP2: (44.841,108.386,109.754)
C3': (43.815,109.324,104.837)
C1': (43.287,111.565,105.355)
C5': (42.433,108.408,106.761)
O6: (47.466,114.930,108.052)
O4': (42.440,110.726,106.121)
C8: (44.823,111.618,107.387)
C2: (45.430,115.327,105.170)
C6: (46.604,114.649,107.207)
C5: (45.794,113.494,107.121)
C4: (44.910,113.382,106.072)
P: (43.618,107.915,109.055)
C4': (42.511,109.372,105.610)
C2': (43.872,110.712,104.223)
O2': (43.041,110.824,103.088)
N1: (46.342,115.530,106.168)
N2: (45.322,116.300,104.260)
N3: (44.680,114.253,105.070)
N7: (45.724,112.380,107.945)
N9: (44.293,112.159,106.240)
O5': (43.573,108.576,107.612)
O3': (43.770,108.298,103.855)
OP1: (47.725,118.008,106.344)
OP2: (48.122,117.844,103.816)
C3': (45.063,122.040,106.375)
C1': (43.879,120.118,105.791)
C5': (47.261,120.805,105.905)
O4': (45.114,120.027,105.119)
C8: (43.706,117.794,106.880)
O2': (42.999,121.490,107.591)
C6: (41.080,116.205,105.141)
C5: (42.108,116.969,105.750)
C4: (42.304,118.248,105.264)
P: (48.354,118.535,105.101)
C4': (45.901,121.219,105.402)
C2': (44.181,120.974,107.015)
C2: (40.693,118.035,103.783)
N1: (40.385,116.783,104.139)
N3: (41.624,118.849,104.276)
N6: (40.756,114.958,105.496)
N7: (43.002,116.694,106.776)
N9: (43.338,118.773,105.993)
O5': (47.953,120.061,104.889)
O3': (44.234,122.924,105.619)
OP2: (48.122,117.844,103.816)
C3': (45.063,122.040,106.375)
C1': (43.879,120.118,105.791)
C5': (47.261,120.805,105.905)
O4': (45.114,120.027,105.119)
C8: (43.706,117.794,106.880)
O2': (42.999,121.490,107.591)
C6: (41.080,116.205,105.141)
C5: (42.108,116.969,105.750)
C4: (42.304,118.248,105.264)
P: (48.354,118.535,105.101)
C4': (45.901,121.219,105.402)
C2': (44.181,120.974,107.015)
C2: (40.693,118.035,103.783)
N1: (40.385,116.783,104.139)
N3: (41.624,118.849,104.276)
N6: (40.756,114.958,105.496)
N7: (43.002,116.694,106.776)
N9: (43.338,118.773,105.993)
O5': (47.953,120.061,104.889)
O3': (44.234,122.924,105.619)
Image (generated by PyMOL):