Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:977:9102
Extra
PDB:
ATOM 1 O3' A A 76 39.349 62.170 125.364 1.00 59.62 O
ATOM 2 P G A 77 37.934 61.715 125.953 1.00 60.11 P
ATOM 3 OP1 G A 77 37.688 62.577 127.139 1.00 57.38 O
ATOM 4 OP2 G A 77 37.940 60.232 126.105 1.00 59.87 O
ATOM 5 O5' G A 77 36.916 62.094 124.786 1.00 57.78 O
ATOM 6 C5' G A 77 36.670 63.472 124.433 1.00 54.57 C
ATOM 7 C4' G A 77 37.750 63.976 123.497 1.00 52.85 C
ATOM 8 O4' G A 77 37.801 63.160 122.285 1.00 50.97 O
ATOM 9 C3' G A 77 37.591 65.417 123.014 1.00 50.81 C
ATOM 10 O3' G A 77 38.907 65.957 122.854 1.00 49.84 O
ATOM 11 C2' G A 77 36.913 65.224 121.663 1.00 49.07 C
ATOM 12 O2' G A 77 37.042 66.323 120.793 1.00 50.37 O
ATOM 13 C1' G A 77 37.674 64.004 121.156 1.00 48.72 C
ATOM 14 N9 G A 77 37.084 63.252 120.050 1.00 47.43 N
ATOM 15 C8 G A 77 35.750 63.059 119.768 1.00 45.17 C
ATOM 16 N7 G A 77 35.554 62.325 118.706 1.00 44.38 N
ATOM 17 C5 G A 77 36.834 62.013 118.259 1.00 44.55 C
ATOM 18 C6 G A 77 37.260 61.234 117.148 1.00 44.03 C
ATOM 19 O6 G A 77 36.570 60.646 116.307 1.00 43.49 O
ATOM 20 N1 G A 77 38.649 61.175 117.067 1.00 44.64 N
ATOM 21 C2 G A 77 39.520 61.790 117.934 1.00 46.05 C
ATOM 22 N2 G A 77 40.834 61.607 117.688 1.00 46.14 N
ATOM 23 N3 G A 77 39.136 62.525 118.966 1.00 44.50 N
ATOM 24 C4 G A 77 37.789 62.586 119.071 1.00 45.64 C
ATOM 25 P U A 78 39.113 67.486 122.402 1.00 49.80 P
ATOM 26 OP1 U A 78 38.081 68.346 123.046 1.00 47.75 O
ATOM 27 OP2 U A 78 39.258 67.496 120.921 1.00 47.77 O
ATOM 28 O5' U A 78 40.530 67.856 123.024 1.00 48.87 O
TER
ATOM 1 O3' G B 101 41.772 60.778 113.683 1.00 40.46 O
ATOM 2 P A B 102 41.629 59.693 114.858 1.00 39.37 P
ATOM 3 OP1 A B 102 42.242 58.431 114.368 1.00 33.61 O
ATOM 4 OP2 A B 102 40.212 59.701 115.314 1.00 39.40 O
ATOM 5 O5' A B 102 42.514 60.296 116.035 1.00 36.54 O
ATOM 6 C5' A B 102 43.800 59.751 116.328 1.00 38.62 C
ATOM 7 C4' A B 102 44.853 60.373 115.442 1.00 39.31 C
ATOM 8 O4' A B 102 44.906 61.809 115.654 1.00 40.34 O
ATOM 9 C3' A B 102 46.253 59.899 115.770 1.00 41.34 C
ATOM 10 O3' A B 102 46.540 58.670 115.136 1.00 42.79 O
ATOM 11 C2' A B 102 47.119 61.046 115.286 1.00 40.68 C
ATOM 12 O2' A B 102 47.285 61.027 113.882 1.00 42.49 O
ATOM 13 C1' A B 102 46.259 62.241 115.693 1.00 39.65 C
ATOM 14 N9 A B 102 46.532 62.711 117.051 1.00 39.96 N
ATOM 15 C8 A B 102 45.647 62.759 118.098 1.00 39.87 C
ATOM 16 N7 A B 102 46.155 63.251 119.196 1.00 41.00 N
ATOM 17 C5 A B 102 47.466 63.543 118.856 1.00 39.71 C
ATOM 18 C6 A B 102 48.523 64.095 119.584 1.00 40.05 C
ATOM 19 N6 A B 102 48.423 64.471 120.860 1.00 40.35 N
ATOM 20 N1 A B 102 49.704 64.254 118.952 1.00 42.45 N
ATOM 21 C2 A B 102 49.800 63.885 117.672 1.00 40.90 C
ATOM 22 N3 A B 102 48.877 63.358 116.880 1.00 42.35 N
ATOM 23 C4 A B 102 47.716 63.209 117.541 1.00 40.54 C
ATOM 24 P A B 103 47.263 57.517 115.969 1.00 42.02 P
ATOM 25 OP1 A B 103 47.582 56.422 115.021 1.00 43.20 O
ATOM 26 OP2 A B 103 46.437 57.239 117.170 1.00 45.15 O
ATOM 27 O5' A B 103 48.609 58.205 116.459 1.00 42.80 O
TER
ATOM 2 P G A 77 37.934 61.715 125.953 1.00 60.11 P
ATOM 3 OP1 G A 77 37.688 62.577 127.139 1.00 57.38 O
ATOM 4 OP2 G A 77 37.940 60.232 126.105 1.00 59.87 O
ATOM 5 O5' G A 77 36.916 62.094 124.786 1.00 57.78 O
ATOM 6 C5' G A 77 36.670 63.472 124.433 1.00 54.57 C
ATOM 7 C4' G A 77 37.750 63.976 123.497 1.00 52.85 C
ATOM 8 O4' G A 77 37.801 63.160 122.285 1.00 50.97 O
ATOM 9 C3' G A 77 37.591 65.417 123.014 1.00 50.81 C
ATOM 10 O3' G A 77 38.907 65.957 122.854 1.00 49.84 O
ATOM 11 C2' G A 77 36.913 65.224 121.663 1.00 49.07 C
ATOM 12 O2' G A 77 37.042 66.323 120.793 1.00 50.37 O
ATOM 13 C1' G A 77 37.674 64.004 121.156 1.00 48.72 C
ATOM 14 N9 G A 77 37.084 63.252 120.050 1.00 47.43 N
ATOM 15 C8 G A 77 35.750 63.059 119.768 1.00 45.17 C
ATOM 16 N7 G A 77 35.554 62.325 118.706 1.00 44.38 N
ATOM 17 C5 G A 77 36.834 62.013 118.259 1.00 44.55 C
ATOM 18 C6 G A 77 37.260 61.234 117.148 1.00 44.03 C
ATOM 19 O6 G A 77 36.570 60.646 116.307 1.00 43.49 O
ATOM 20 N1 G A 77 38.649 61.175 117.067 1.00 44.64 N
ATOM 21 C2 G A 77 39.520 61.790 117.934 1.00 46.05 C
ATOM 22 N2 G A 77 40.834 61.607 117.688 1.00 46.14 N
ATOM 23 N3 G A 77 39.136 62.525 118.966 1.00 44.50 N
ATOM 24 C4 G A 77 37.789 62.586 119.071 1.00 45.64 C
ATOM 25 P U A 78 39.113 67.486 122.402 1.00 49.80 P
ATOM 26 OP1 U A 78 38.081 68.346 123.046 1.00 47.75 O
ATOM 27 OP2 U A 78 39.258 67.496 120.921 1.00 47.77 O
ATOM 28 O5' U A 78 40.530 67.856 123.024 1.00 48.87 O
TER
ATOM 1 O3' G B 101 41.772 60.778 113.683 1.00 40.46 O
ATOM 2 P A B 102 41.629 59.693 114.858 1.00 39.37 P
ATOM 3 OP1 A B 102 42.242 58.431 114.368 1.00 33.61 O
ATOM 4 OP2 A B 102 40.212 59.701 115.314 1.00 39.40 O
ATOM 5 O5' A B 102 42.514 60.296 116.035 1.00 36.54 O
ATOM 6 C5' A B 102 43.800 59.751 116.328 1.00 38.62 C
ATOM 7 C4' A B 102 44.853 60.373 115.442 1.00 39.31 C
ATOM 8 O4' A B 102 44.906 61.809 115.654 1.00 40.34 O
ATOM 9 C3' A B 102 46.253 59.899 115.770 1.00 41.34 C
ATOM 10 O3' A B 102 46.540 58.670 115.136 1.00 42.79 O
ATOM 11 C2' A B 102 47.119 61.046 115.286 1.00 40.68 C
ATOM 12 O2' A B 102 47.285 61.027 113.882 1.00 42.49 O
ATOM 13 C1' A B 102 46.259 62.241 115.693 1.00 39.65 C
ATOM 14 N9 A B 102 46.532 62.711 117.051 1.00 39.96 N
ATOM 15 C8 A B 102 45.647 62.759 118.098 1.00 39.87 C
ATOM 16 N7 A B 102 46.155 63.251 119.196 1.00 41.00 N
ATOM 17 C5 A B 102 47.466 63.543 118.856 1.00 39.71 C
ATOM 18 C6 A B 102 48.523 64.095 119.584 1.00 40.05 C
ATOM 19 N6 A B 102 48.423 64.471 120.860 1.00 40.35 N
ATOM 20 N1 A B 102 49.704 64.254 118.952 1.00 42.45 N
ATOM 21 C2 A B 102 49.800 63.885 117.672 1.00 40.90 C
ATOM 22 N3 A B 102 48.877 63.358 116.880 1.00 42.35 N
ATOM 23 C4 A B 102 47.716 63.209 117.541 1.00 40.54 C
ATOM 24 P A B 103 47.263 57.517 115.969 1.00 42.02 P
ATOM 25 OP1 A B 103 47.582 56.422 115.021 1.00 43.20 O
ATOM 26 OP2 A B 103 46.437 57.239 117.170 1.00 45.15 O
ATOM 27 O5' A B 103 48.609 58.205 116.459 1.00 42.80 O
TER
Atoms:
OP1: (37.688,62.577,127.139)
OP2: (37.940,60.232,126.105)
C3': (37.591,65.417,123.014)
C1': (37.674,64.004,121.156)
C5': (36.670,63.472,124.433)
O6: (36.570,60.646,116.307)
O4': (37.801,63.160,122.285)
C8: (35.750,63.059,119.768)
C2: (39.520,61.790,117.934)
C6: (37.260,61.234,117.148)
C5: (36.834,62.013,118.259)
C4: (37.789,62.586,119.071)
P: (37.934,61.715,125.953)
C4': (37.750,63.976,123.497)
C2': (36.913,65.224,121.663)
O2': (37.042,66.323,120.793)
N1: (38.649,61.175,117.067)
N2: (40.834,61.607,117.688)
N3: (39.136,62.525,118.966)
N7: (35.554,62.325,118.706)
N9: (37.084,63.252,120.050)
O5': (36.916,62.094,124.786)
O3': (38.907,65.957,122.854)
OP2: (37.940,60.232,126.105)
C3': (37.591,65.417,123.014)
C1': (37.674,64.004,121.156)
C5': (36.670,63.472,124.433)
O6: (36.570,60.646,116.307)
O4': (37.801,63.160,122.285)
C8: (35.750,63.059,119.768)
C2: (39.520,61.790,117.934)
C6: (37.260,61.234,117.148)
C5: (36.834,62.013,118.259)
C4: (37.789,62.586,119.071)
P: (37.934,61.715,125.953)
C4': (37.750,63.976,123.497)
C2': (36.913,65.224,121.663)
O2': (37.042,66.323,120.793)
N1: (38.649,61.175,117.067)
N2: (40.834,61.607,117.688)
N3: (39.136,62.525,118.966)
N7: (35.554,62.325,118.706)
N9: (37.084,63.252,120.050)
O5': (36.916,62.094,124.786)
O3': (38.907,65.957,122.854)
OP1: (42.242,58.431,114.368)
OP2: (40.212,59.701,115.314)
C3': (46.253,59.899,115.770)
C1': (46.259,62.241,115.693)
C5': (43.800,59.751,116.328)
O4': (44.906,61.809,115.654)
C8: (45.647,62.759,118.098)
O2': (47.285,61.027,113.882)
C6: (48.523,64.095,119.584)
C5: (47.466,63.543,118.856)
C4: (47.716,63.209,117.541)
P: (41.629,59.693,114.858)
C4': (44.853,60.373,115.442)
C2': (47.119,61.046,115.286)
C2: (49.800,63.885,117.672)
N1: (49.704,64.254,118.952)
N3: (48.877,63.358,116.880)
N6: (48.423,64.471,120.860)
N7: (46.155,63.251,119.196)
N9: (46.532,62.711,117.051)
O5': (42.514,60.296,116.035)
O3': (46.540,58.670,115.136)
OP2: (40.212,59.701,115.314)
C3': (46.253,59.899,115.770)
C1': (46.259,62.241,115.693)
C5': (43.800,59.751,116.328)
O4': (44.906,61.809,115.654)
C8: (45.647,62.759,118.098)
O2': (47.285,61.027,113.882)
C6: (48.523,64.095,119.584)
C5: (47.466,63.543,118.856)
C4: (47.716,63.209,117.541)
P: (41.629,59.693,114.858)
C4': (44.853,60.373,115.442)
C2': (47.119,61.046,115.286)
C2: (49.800,63.885,117.672)
N1: (49.704,64.254,118.952)
N3: (48.877,63.358,116.880)
N6: (48.423,64.471,120.860)
N7: (46.155,63.251,119.196)
N9: (46.532,62.711,117.051)
O5': (42.514,60.296,116.035)
O3': (46.540,58.670,115.136)
Image (generated by PyMOL):