Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A276:A251
Extra
PDB:
ATOM 1 O3' G A 275 56.094 -39.778-106.974 1.00 78.63 O
ATOM 2 P G A 276 57.013 -41.061-106.733 1.00 86.36 P
ATOM 3 OP1 G A 276 57.910 -41.183-107.906 1.00 89.52 O
ATOM 4 OP2 G A 276 56.163 -42.216-106.333 1.00 71.41 O
ATOM 5 O5' G A 276 57.890 -40.618-105.484 1.00 77.57 O
ATOM 6 C5' G A 276 58.982 -39.719-105.643 1.00 74.76 C
ATOM 7 C4' G A 276 59.693 -39.559-104.330 1.00 74.03 C
ATOM 8 O4' G A 276 58.818 -38.832-103.439 1.00 76.32 O
ATOM 9 C3' G A 276 60.003 -40.868-103.617 1.00 71.59 C
ATOM 10 O3' G A 276 61.262 -41.407-104.020 1.00 69.34 O
ATOM 11 C2' G A 276 60.009 -40.456-102.154 1.00 72.54 C
ATOM 12 O2' G A 276 61.284 -39.969-101.776 1.00 74.03 O
ATOM 13 C1' G A 276 58.952 -39.340-102.134 1.00 76.19 C
ATOM 14 N9 G A 276 57.639 -39.786-101.691 1.00 70.86 N
ATOM 15 C8 G A 276 56.864 -40.766-102.258 1.00 75.74 C
ATOM 16 N7 G A 276 55.767 -40.999-101.593 1.00 79.99 N
ATOM 17 C5 G A 276 55.812 -40.106-100.533 1.00 81.05 C
ATOM 18 C6 G A 276 54.905 -39.909 -99.452 1.00 88.41 C
ATOM 19 O6 G A 276 53.852 -40.527 -99.200 1.00 93.20 O
ATOM 20 N1 G A 276 55.330 -38.880 -98.612 1.00 86.36 N
ATOM 21 C2 G A 276 56.483 -38.141 -98.785 1.00 81.18 C
ATOM 22 N2 G A 276 56.707 -37.156 -97.893 1.00 77.91 N
ATOM 23 N3 G A 276 57.347 -38.343 -99.768 1.00 76.59 N
ATOM 24 C4 G A 276 56.950 -39.330-100.598 1.00 74.16 C
ATOM 25 P U A 277 61.396 -42.971-104.401 1.00 73.96 P
ATOM 26 OP1 U A 277 62.163 -43.069-105.667 1.00 78.11 O
ATOM 27 OP2 U A 277 60.086 -43.672-104.281 1.00 77.06 O
ATOM 28 O5' U A 277 62.352 -43.543-103.273 1.00 76.22 O
TER
ATOM 1 O3' U B 250 54.204 -38.602 -94.403 1.00 68.47 O
ATOM 2 P A B 251 54.039 -37.130 -95.039 1.00 80.88 P
ATOM 3 OP1 A B 251 52.805 -36.509 -94.479 1.00 67.89 O
ATOM 4 OP2 A B 251 54.199 -37.239 -96.520 1.00 83.61 O
ATOM 5 O5' A B 251 55.302 -36.327 -94.482 1.00 70.12 O
ATOM 6 C5' A B 251 55.336 -35.866 -93.139 1.00 66.69 C
ATOM 7 C4' A B 251 56.587 -35.049 -92.900 1.00 72.37 C
ATOM 8 O4' A B 251 57.757 -35.908 -92.854 1.00 71.63 O
ATOM 9 C3' A B 251 56.946 -34.033 -93.972 1.00 78.27 C
ATOM 10 O3' A B 251 56.200 -32.826 -93.890 1.00 81.04 O
ATOM 11 C2' A B 251 58.434 -33.789 -93.735 1.00 70.98 C
ATOM 12 O2' A B 251 58.678 -32.745 -92.806 1.00 60.55 O
ATOM 13 C1' A B 251 58.902 -35.149 -93.204 1.00 67.78 C
ATOM 14 N9 A B 251 59.723 -35.913 -94.149 1.00 67.51 N
ATOM 15 C8 A B 251 59.429 -37.058 -94.849 1.00 68.43 C
ATOM 16 N7 A B 251 60.410 -37.473 -95.616 1.00 68.50 N
ATOM 17 C5 A B 251 61.416 -36.539 -95.406 1.00 66.97 C
ATOM 18 C6 A B 251 62.719 -36.409 -95.924 1.00 67.77 C
ATOM 19 N6 A B 251 63.265 -37.257 -96.788 1.00 70.96 N
ATOM 20 N1 A B 251 63.457 -35.360 -95.512 1.00 70.82 N
ATOM 21 C2 A B 251 62.926 -34.509 -94.637 1.00 70.30 C
ATOM 22 N3 A B 251 61.722 -34.524 -94.074 1.00 72.69 N
ATOM 23 C4 A B 251 61.006 -35.576 -94.507 1.00 69.83 C
ATOM 24 P A B 252 55.732 -32.105 -95.244 1.00 72.62 P
ATOM 25 OP1 A B 252 54.910 -30.912 -94.904 1.00 65.84 O
ATOM 26 OP2 A B 252 55.186 -33.153 -96.150 1.00 80.00 O
ATOM 27 O5' A B 252 57.091 -31.637 -95.904 1.00 64.11 O
TER
ATOM 2 P G A 276 57.013 -41.061-106.733 1.00 86.36 P
ATOM 3 OP1 G A 276 57.910 -41.183-107.906 1.00 89.52 O
ATOM 4 OP2 G A 276 56.163 -42.216-106.333 1.00 71.41 O
ATOM 5 O5' G A 276 57.890 -40.618-105.484 1.00 77.57 O
ATOM 6 C5' G A 276 58.982 -39.719-105.643 1.00 74.76 C
ATOM 7 C4' G A 276 59.693 -39.559-104.330 1.00 74.03 C
ATOM 8 O4' G A 276 58.818 -38.832-103.439 1.00 76.32 O
ATOM 9 C3' G A 276 60.003 -40.868-103.617 1.00 71.59 C
ATOM 10 O3' G A 276 61.262 -41.407-104.020 1.00 69.34 O
ATOM 11 C2' G A 276 60.009 -40.456-102.154 1.00 72.54 C
ATOM 12 O2' G A 276 61.284 -39.969-101.776 1.00 74.03 O
ATOM 13 C1' G A 276 58.952 -39.340-102.134 1.00 76.19 C
ATOM 14 N9 G A 276 57.639 -39.786-101.691 1.00 70.86 N
ATOM 15 C8 G A 276 56.864 -40.766-102.258 1.00 75.74 C
ATOM 16 N7 G A 276 55.767 -40.999-101.593 1.00 79.99 N
ATOM 17 C5 G A 276 55.812 -40.106-100.533 1.00 81.05 C
ATOM 18 C6 G A 276 54.905 -39.909 -99.452 1.00 88.41 C
ATOM 19 O6 G A 276 53.852 -40.527 -99.200 1.00 93.20 O
ATOM 20 N1 G A 276 55.330 -38.880 -98.612 1.00 86.36 N
ATOM 21 C2 G A 276 56.483 -38.141 -98.785 1.00 81.18 C
ATOM 22 N2 G A 276 56.707 -37.156 -97.893 1.00 77.91 N
ATOM 23 N3 G A 276 57.347 -38.343 -99.768 1.00 76.59 N
ATOM 24 C4 G A 276 56.950 -39.330-100.598 1.00 74.16 C
ATOM 25 P U A 277 61.396 -42.971-104.401 1.00 73.96 P
ATOM 26 OP1 U A 277 62.163 -43.069-105.667 1.00 78.11 O
ATOM 27 OP2 U A 277 60.086 -43.672-104.281 1.00 77.06 O
ATOM 28 O5' U A 277 62.352 -43.543-103.273 1.00 76.22 O
TER
ATOM 1 O3' U B 250 54.204 -38.602 -94.403 1.00 68.47 O
ATOM 2 P A B 251 54.039 -37.130 -95.039 1.00 80.88 P
ATOM 3 OP1 A B 251 52.805 -36.509 -94.479 1.00 67.89 O
ATOM 4 OP2 A B 251 54.199 -37.239 -96.520 1.00 83.61 O
ATOM 5 O5' A B 251 55.302 -36.327 -94.482 1.00 70.12 O
ATOM 6 C5' A B 251 55.336 -35.866 -93.139 1.00 66.69 C
ATOM 7 C4' A B 251 56.587 -35.049 -92.900 1.00 72.37 C
ATOM 8 O4' A B 251 57.757 -35.908 -92.854 1.00 71.63 O
ATOM 9 C3' A B 251 56.946 -34.033 -93.972 1.00 78.27 C
ATOM 10 O3' A B 251 56.200 -32.826 -93.890 1.00 81.04 O
ATOM 11 C2' A B 251 58.434 -33.789 -93.735 1.00 70.98 C
ATOM 12 O2' A B 251 58.678 -32.745 -92.806 1.00 60.55 O
ATOM 13 C1' A B 251 58.902 -35.149 -93.204 1.00 67.78 C
ATOM 14 N9 A B 251 59.723 -35.913 -94.149 1.00 67.51 N
ATOM 15 C8 A B 251 59.429 -37.058 -94.849 1.00 68.43 C
ATOM 16 N7 A B 251 60.410 -37.473 -95.616 1.00 68.50 N
ATOM 17 C5 A B 251 61.416 -36.539 -95.406 1.00 66.97 C
ATOM 18 C6 A B 251 62.719 -36.409 -95.924 1.00 67.77 C
ATOM 19 N6 A B 251 63.265 -37.257 -96.788 1.00 70.96 N
ATOM 20 N1 A B 251 63.457 -35.360 -95.512 1.00 70.82 N
ATOM 21 C2 A B 251 62.926 -34.509 -94.637 1.00 70.30 C
ATOM 22 N3 A B 251 61.722 -34.524 -94.074 1.00 72.69 N
ATOM 23 C4 A B 251 61.006 -35.576 -94.507 1.00 69.83 C
ATOM 24 P A B 252 55.732 -32.105 -95.244 1.00 72.62 P
ATOM 25 OP1 A B 252 54.910 -30.912 -94.904 1.00 65.84 O
ATOM 26 OP2 A B 252 55.186 -33.153 -96.150 1.00 80.00 O
ATOM 27 O5' A B 252 57.091 -31.637 -95.904 1.00 64.11 O
TER
Atoms:
OP1: (57.910,-41.183,-107.906)
OP2: (56.163,-42.216,-106.333)
C3': (60.003,-40.868,-103.617)
C1': (58.952,-39.340,-102.134)
C5': (58.982,-39.719,-105.643)
O6: (53.852,-40.527,-99.200)
O4': (58.818,-38.832,-103.439)
C8: (56.864,-40.766,-102.258)
C2: (56.483,-38.141,-98.785)
C6: (54.905,-39.909,-99.452)
C5: (55.812,-40.106,-100.533)
C4: (56.950,-39.330,-100.598)
P: (57.013,-41.061,-106.733)
C4': (59.693,-39.559,-104.330)
C2': (60.009,-40.456,-102.154)
O2': (61.284,-39.969,-101.776)
N1: (55.330,-38.880,-98.612)
N2: (56.707,-37.156,-97.893)
N3: (57.347,-38.343,-99.768)
N7: (55.767,-40.999,-101.593)
N9: (57.639,-39.786,-101.691)
O5': (57.890,-40.618,-105.484)
O3': (61.262,-41.407,-104.020)
OP2: (56.163,-42.216,-106.333)
C3': (60.003,-40.868,-103.617)
C1': (58.952,-39.340,-102.134)
C5': (58.982,-39.719,-105.643)
O6: (53.852,-40.527,-99.200)
O4': (58.818,-38.832,-103.439)
C8: (56.864,-40.766,-102.258)
C2: (56.483,-38.141,-98.785)
C6: (54.905,-39.909,-99.452)
C5: (55.812,-40.106,-100.533)
C4: (56.950,-39.330,-100.598)
P: (57.013,-41.061,-106.733)
C4': (59.693,-39.559,-104.330)
C2': (60.009,-40.456,-102.154)
O2': (61.284,-39.969,-101.776)
N1: (55.330,-38.880,-98.612)
N2: (56.707,-37.156,-97.893)
N3: (57.347,-38.343,-99.768)
N7: (55.767,-40.999,-101.593)
N9: (57.639,-39.786,-101.691)
O5': (57.890,-40.618,-105.484)
O3': (61.262,-41.407,-104.020)
OP1: (52.805,-36.509,-94.479)
OP2: (54.199,-37.239,-96.520)
C3': (56.946,-34.033,-93.972)
C1': (58.902,-35.149,-93.204)
C5': (55.336,-35.866,-93.139)
O4': (57.757,-35.908,-92.854)
C8: (59.429,-37.058,-94.849)
O2': (58.678,-32.745,-92.806)
C6: (62.719,-36.409,-95.924)
C5: (61.416,-36.539,-95.406)
C4: (61.006,-35.576,-94.507)
P: (54.039,-37.130,-95.039)
C4': (56.587,-35.049,-92.900)
C2': (58.434,-33.789,-93.735)
C2: (62.926,-34.509,-94.637)
N1: (63.457,-35.360,-95.512)
N3: (61.722,-34.524,-94.074)
N6: (63.265,-37.257,-96.788)
N7: (60.410,-37.473,-95.616)
N9: (59.723,-35.913,-94.149)
O5': (55.302,-36.327,-94.482)
O3': (56.200,-32.826,-93.890)
OP2: (54.199,-37.239,-96.520)
C3': (56.946,-34.033,-93.972)
C1': (58.902,-35.149,-93.204)
C5': (55.336,-35.866,-93.139)
O4': (57.757,-35.908,-92.854)
C8: (59.429,-37.058,-94.849)
O2': (58.678,-32.745,-92.806)
C6: (62.719,-36.409,-95.924)
C5: (61.416,-36.539,-95.406)
C4: (61.006,-35.576,-94.507)
P: (54.039,-37.130,-95.039)
C4': (56.587,-35.049,-92.900)
C2': (58.434,-33.789,-93.735)
C2: (62.926,-34.509,-94.637)
N1: (63.457,-35.360,-95.512)
N3: (61.722,-34.524,-94.074)
N6: (63.265,-37.257,-96.788)
N7: (60.410,-37.473,-95.616)
N9: (59.723,-35.913,-94.149)
O5': (55.302,-36.327,-94.482)
O3': (56.200,-32.826,-93.890)
Image (generated by PyMOL):