ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1JJ2:0257:0229

Extra

PDB:
ATOM 1 O3' U A 256 80.116 108.095 -4.643 1.00 38.31 O
ATOM 2 P G A 257 78.835 107.706 -3.755 1.00 40.40 P
ATOM 3 OP1 G A 257 78.005 106.726 -4.514 1.00 39.74 O
ATOM 4 OP2 G A 257 78.215 108.968 -3.279 1.00 40.36 O
ATOM 5 O5' G A 257 79.474 106.955 -2.506 1.00 37.52 O
ATOM 6 C5' G A 257 80.281 105.780 -2.681 1.00 36.76 C
ATOM 7 C4' G A 257 80.866 105.370 -1.357 1.00 39.92 C
ATOM 8 O4' G A 257 81.899 106.317 -0.971 1.00 39.58 O
ATOM 9 C3' G A 257 79.865 105.380 -0.207 1.00 40.12 C
ATOM 10 O3' G A 257 79.142 104.152 -0.149 1.00 41.99 O
ATOM 11 C2' G A 257 80.751 105.635 1.005 1.00 38.99 C
ATOM 12 O2' G A 257 81.401 104.462 1.461 1.00 41.35 O
ATOM 13 C1' G A 257 81.792 106.599 0.416 1.00 38.58 C
ATOM 14 N9 G A 257 81.455 108.015 0.557 1.00 34.33 N
ATOM 15 C8 G A 257 80.386 108.674 -0.001 1.00 32.35 C
ATOM 16 N7 G A 257 80.350 109.940 0.305 1.00 31.22 N
ATOM 17 C5 G A 257 81.461 110.130 1.114 1.00 30.36 C
ATOM 18 C6 G A 257 81.935 111.297 1.754 1.00 29.84 C
ATOM 19 O6 G A 257 81.453 112.436 1.730 1.00 28.44 O
ATOM 20 N1 G A 257 83.090 111.045 2.483 1.00 27.74 N
ATOM 21 C2 G A 257 83.710 109.825 2.582 1.00 30.91 C
ATOM 22 N2 G A 257 84.819 109.776 3.331 1.00 30.15 N
ATOM 23 N3 G A 257 83.275 108.728 1.990 1.00 32.20 N
ATOM 24 C4 G A 257 82.153 108.953 1.278 1.00 31.21 C
ATOM 25 P U A 258 77.663 104.117 0.483 1.00 42.79 P
ATOM 26 OP1 U A 258 76.978 102.895 -0.007 1.00 44.87 O
ATOM 27 OP2 U A 258 77.016 105.439 0.289 1.00 41.80 O
ATOM 28 O5' U A 258 77.948 103.921 2.035 1.00 43.98 O
TER

ATOM 1 O3' C B 228 83.806 113.466 5.983 1.00 35.17 O
ATOM 2 P A B 229 85.191 113.147 5.238 1.00 36.57 P
ATOM 3 OP1 A B 229 85.923 114.439 5.150 1.00 36.78 O
ATOM 4 OP2 A B 229 84.883 112.386 3.997 1.00 37.82 O
ATOM 5 O5' A B 229 85.977 112.176 6.223 1.00 35.57 O
ATOM 6 C5' A B 229 86.570 112.665 7.428 1.00 33.61 C
ATOM 7 C4' A B 229 87.333 111.560 8.116 1.00 35.51 C
ATOM 8 O4' A B 229 86.421 110.565 8.648 1.00 36.07 O
ATOM 9 C3' A B 229 88.218 110.719 7.221 1.00 36.07 C
ATOM 10 O3' A B 229 89.412 111.399 6.875 1.00 37.83 O
ATOM 11 C2' A B 229 88.472 109.500 8.099 1.00 36.44 C
ATOM 12 O2' A B 229 89.437 109.743 9.100 1.00 38.41 O
ATOM 13 C1' A B 229 87.111 109.332 8.779 1.00 36.35 C
ATOM 14 N9 A B 229 86.301 108.256 8.201 1.00 37.97 N
ATOM 15 C8 A B 229 85.319 108.332 7.243 1.00 37.42 C
ATOM 16 N7 A B 229 84.793 107.172 6.933 1.00 37.52 N
ATOM 17 C5 A B 229 85.476 106.269 7.737 1.00 37.12 C
ATOM 18 C6 A B 229 85.397 104.867 7.871 1.00 36.92 C
ATOM 19 N6 A B 229 84.579 104.097 7.149 1.00 36.32 N
ATOM 20 N1 A B 229 86.208 104.277 8.774 1.00 36.39 N
ATOM 21 C2 A B 229 87.052 105.046 9.474 1.00 38.44 C
ATOM 22 N3 A B 229 87.230 106.364 9.427 1.00 36.56 N
ATOM 23 C4 A B 229 86.400 106.923 8.529 1.00 36.95 C
ATOM 24 P A B 230 89.872 111.464 5.332 1.00 38.15 P
ATOM 25 OP1 A B 230 91.115 112.273 5.311 1.00 37.24 O
ATOM 26 OP2 A B 230 88.708 111.884 4.504 1.00 35.88 O
ATOM 27 O5' A B 230 90.230 109.949 4.980 1.00 36.16 O
TER

Atoms:
OP1: (78.005,106.726,-4.514)
OP2: (78.215,108.968,-3.279)
C3': (79.865,105.380,-0.207)
C1': (81.792,106.599,0.416)
C5': (80.281,105.780,-2.681)
O6: (81.453,112.436,1.730)
O4': (81.899,106.317,-0.971)
C8: (80.386,108.674,-0.001)
C2: (83.710,109.825,2.582)
C6: (81.935,111.297,1.754)
C5: (81.461,110.130,1.114)
C4: (82.153,108.953,1.278)
P: (78.835,107.706,-3.755)
C4': (80.866,105.370,-1.357)
C2': (80.751,105.635,1.005)
O2': (81.401,104.462,1.461)
N1: (83.090,111.045,2.483)
N2: (84.819,109.776,3.331)
N3: (83.275,108.728,1.990)
N7: (80.350,109.940,0.305)
N9: (81.455,108.015,0.557)
O5': (79.474,106.955,-2.506)
O3': (79.142,104.152,-0.149)
OP1: (85.923,114.439,5.150)
OP2: (84.883,112.386,3.997)
C3': (88.218,110.719,7.221)
C1': (87.111,109.332,8.779)
C5': (86.570,112.665,7.428)
O4': (86.421,110.565,8.648)
C8: (85.319,108.332,7.243)
O2': (89.437,109.743,9.100)
C6: (85.397,104.867,7.871)
C5: (85.476,106.269,7.737)
C4: (86.400,106.923,8.529)
P: (85.191,113.147,5.238)
C4': (87.333,111.560,8.116)
C2': (88.472,109.500,8.099)
C2: (87.052,105.046,9.474)
N1: (86.208,104.277,8.774)
N3: (87.230,106.364,9.427)
N6: (84.579,104.097,7.149)
N7: (84.793,107.172,6.933)
N9: (86.301,108.256,8.201)
O5': (85.977,112.176,6.223)
O3': (89.412,111.399,6.875)
Image (generated by PyMOL):
PyMOL image
show in jmol