ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:0659:0663

Extra

PDB:
ATOM 1 O3' G A 658 31.230 108.600 17.806 1.00 42.08 O
ATOM 2 P A A 659 30.908 110.174 17.826 1.00 44.91 P
ATOM 3 OP1 A A 659 29.836 110.432 16.822 1.00 44.81 O
ATOM 4 OP2 A A 659 32.198 110.913 17.739 1.00 46.06 O
ATOM 5 O5' A A 659 30.262 110.443 19.253 1.00 43.51 O
ATOM 6 C5' A A 659 28.935 110.006 19.547 1.00 42.40 C
ATOM 7 C4' A A 659 28.663 110.170 21.015 1.00 41.96 C
ATOM 8 O4' A A 659 29.645 109.413 21.766 1.00 42.05 O
ATOM 9 C3' A A 659 28.812 111.586 21.531 1.00 40.31 C
ATOM 10 O3' A A 659 27.604 112.294 21.322 1.00 40.11 O
ATOM 11 C2' A A 659 29.103 111.363 23.007 1.00 41.32 C
ATOM 12 O2' A A 659 27.940 111.047 23.743 1.00 44.15 O
ATOM 13 C1' A A 659 29.982 110.117 22.948 1.00 41.52 C
ATOM 14 N9 A A 659 31.412 110.409 22.909 1.00 42.81 N
ATOM 15 C8 A A 659 32.229 110.505 21.809 1.00 42.89 C
ATOM 16 N7 A A 659 33.481 110.757 22.102 1.00 44.19 N
ATOM 17 C5 A A 659 33.489 110.838 23.489 1.00 44.41 C
ATOM 18 C6 A A 659 34.516 111.085 24.415 1.00 43.72 C
ATOM 19 N6 A A 659 35.783 111.306 24.069 1.00 45.58 N
ATOM 20 N1 A A 659 34.192 111.099 25.725 1.00 44.37 N
ATOM 21 C2 A A 659 32.918 110.877 26.073 1.00 45.12 C
ATOM 22 N3 A A 659 31.863 110.634 25.296 1.00 44.71 N
ATOM 23 C4 A A 659 32.221 110.630 23.999 1.00 44.15 C
ATOM 24 P G A 660 27.581 113.889 21.451 1.00 40.08 P
ATOM 25 OP1 G A 660 26.418 114.411 20.673 1.00 40.18 O
ATOM 26 OP2 G A 660 28.954 114.365 21.128 1.00 41.68 O
ATOM 27 O5' G A 660 27.291 114.129 22.999 1.00 41.49 O
TER

ATOM 1 O3' A B 662 36.594 111.207 33.093 1.00 40.72 O
ATOM 2 P U B 663 36.139 109.744 32.609 1.00 41.41 P
ATOM 3 OP1 U B 663 37.095 108.749 33.180 1.00 42.19 O
ATOM 4 OP2 U B 663 35.927 109.810 31.130 1.00 41.41 O
ATOM 5 O5' U B 663 34.720 109.539 33.295 1.00 39.94 O
ATOM 6 C5' U B 663 34.561 109.671 34.711 1.00 36.36 C
ATOM 7 C4' U B 663 33.122 109.982 35.033 1.00 36.16 C
ATOM 8 O4' U B 663 32.741 111.194 34.329 1.00 36.14 O
ATOM 9 C3' U B 663 32.093 108.969 34.553 1.00 34.29 C
ATOM 10 O3' U B 663 31.968 107.869 35.429 1.00 34.48 O
ATOM 11 C2' U B 663 30.828 109.808 34.531 1.00 35.97 C
ATOM 12 O2' U B 663 30.298 110.073 35.819 1.00 34.39 O
ATOM 13 C1' U B 663 31.373 111.111 33.953 1.00 36.77 C
ATOM 14 N1 U B 663 31.272 111.134 32.483 1.00 36.63 N
ATOM 15 C2 U B 663 30.059 111.507 31.954 1.00 35.91 C
ATOM 16 O2 U B 663 29.095 111.774 32.653 1.00 36.84 O
ATOM 17 N3 U B 663 30.010 111.555 30.582 1.00 37.09 N
ATOM 18 C4 U B 663 31.031 111.251 29.701 1.00 37.88 C
ATOM 19 O4 U B 663 30.829 111.344 28.484 1.00 40.00 O
ATOM 20 C5 U B 663 32.259 110.847 30.326 1.00 36.72 C
ATOM 21 C6 U B 663 32.337 110.805 31.661 1.00 36.99 C
ATOM 22 P C B 664 32.267 106.393 34.885 1.00 35.14 P
ATOM 23 OP1 C B 664 31.914 105.465 35.987 1.00 37.09 O
ATOM 24 OP2 C B 664 33.633 106.359 34.313 1.00 36.16 O
ATOM 25 O5' C B 664 31.213 106.214 33.702 1.00 37.32 O
TER

Atoms:
OP1: (29.836,110.432,16.822)
OP2: (32.198,110.913,17.739)
C3': (28.812,111.586,21.531)
C1': (29.982,110.117,22.948)
C5': (28.935,110.006,19.547)
O4': (29.645,109.413,21.766)
C8: (32.229,110.505,21.809)
O2': (27.940,111.047,23.743)
C6: (34.516,111.085,24.415)
C5: (33.489,110.838,23.489)
C4: (32.221,110.630,23.999)
P: (30.908,110.174,17.826)
C4': (28.663,110.170,21.015)
C2': (29.103,111.363,23.007)
C2: (32.918,110.877,26.073)
N1: (34.192,111.099,25.725)
N3: (31.863,110.634,25.296)
N6: (35.783,111.306,24.069)
N7: (33.481,110.757,22.102)
N9: (31.412,110.409,22.909)
O5': (30.262,110.443,19.253)
O3': (27.604,112.294,21.322)
C4: (31.031,111.251,29.701)
N3: (30.010,111.555,30.582)
OP1: (37.095,108.749,33.180)
OP2: (35.927,109.810,31.130)
C2: (30.059,111.507,31.954)
C1': (31.373,111.111,33.953)
C3': (32.093,108.969,34.553)
O5': (34.720,109.539,33.295)
O4': (32.741,111.194,34.329)
C5': (34.561,109.671,34.711)
P: (36.139,109.744,32.609)
C4': (33.122,109.982,35.033)
C2': (30.828,109.808,34.531)
O2': (30.298,110.073,35.819)
N1: (31.272,111.134,32.483)
O4: (30.829,111.344,28.484)
O2: (29.095,111.774,32.653)
C6: (32.337,110.805,31.661)
C5: (32.259,110.847,30.326)
O3': (31.968,107.869,35.429)
Image (generated by PyMOL):
PyMOL image
show in jmol