Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E21:E8
Extra
PDB:
ATOM 1 O3' G A 20 -25.870 33.997 -4.740 1.00 39.05 O
ATOM 2 P G A 21 -25.240 34.358 -6.174 1.00 43.82 P
ATOM 3 OP1 G A 21 -26.324 34.225 -7.181 1.00 44.28 O
ATOM 4 OP2 G A 21 -23.980 33.591 -6.345 1.00 45.67 O
ATOM 5 O5' G A 21 -24.867 35.902 -6.051 1.00 45.58 O
ATOM 6 C5' G A 21 -25.887 36.879 -5.876 1.00 46.53 C
ATOM 7 C4' G A 21 -25.311 38.269 -5.994 1.00 45.57 C
ATOM 8 O4' G A 21 -24.440 38.553 -4.869 1.00 44.93 O
ATOM 9 C3' G A 21 -24.427 38.526 -7.199 1.00 45.70 C
ATOM 10 O3' G A 21 -25.209 38.775 -8.359 1.00 49.09 O
ATOM 11 C2' G A 21 -23.654 39.764 -6.760 1.00 45.65 C
ATOM 12 O2' G A 21 -24.397 40.955 -6.922 1.00 45.97 O
ATOM 13 C1' G A 21 -23.451 39.488 -5.268 1.00 44.99 C
ATOM 14 N9 G A 21 -22.134 38.937 -4.966 1.00 44.11 N
ATOM 15 C8 G A 21 -21.774 37.612 -4.927 1.00 44.36 C
ATOM 16 N7 G A 21 -20.514 37.432 -4.636 1.00 43.89 N
ATOM 17 C5 G A 21 -20.012 38.716 -4.471 1.00 41.45 C
ATOM 18 C6 G A 21 -18.704 39.158 -4.145 1.00 41.18 C
ATOM 19 O6 G A 21 -17.692 38.481 -3.932 1.00 43.25 O
ATOM 20 N1 G A 21 -18.634 40.545 -4.076 1.00 40.80 N
ATOM 21 C2 G A 21 -19.685 41.399 -4.293 1.00 41.85 C
ATOM 22 N2 G A 21 -19.414 42.709 -4.181 1.00 41.71 N
ATOM 23 N3 G A 21 -20.910 41.001 -4.597 1.00 41.84 N
ATOM 24 C4 G A 21 -21.000 39.656 -4.669 1.00 42.35 C
ATOM 25 P A A 22 -24.481 38.997 -9.773 1.00 50.65 P
ATOM 26 OP1 A A 22 -25.522 39.040 -10.833 1.00 52.67 O
ATOM 27 OP2 A A 22 -23.373 38.014 -9.872 1.00 51.88 O
ATOM 28 O5' A A 22 -23.845 40.449 -9.637 1.00 46.40 O
TER
ATOM 1 O3' U B 7 -10.978 35.773 1.015 1.00 28.63 O
ATOM 2 P C B 8 -10.332 36.420 -0.307 1.00 28.43 P
ATOM 3 OP1 C B 8 -9.383 35.435 -0.888 1.00 27.97 O
ATOM 4 OP2 C B 8 -9.851 37.782 0.047 1.00 31.63 O
ATOM 5 O5' C B 8 -11.563 36.577 -1.305 1.00 26.78 O
ATOM 6 C5' C B 8 -11.356 36.523 -2.711 1.00 24.57 C
ATOM 7 C4' C B 8 -11.358 35.087 -3.168 1.00 22.73 C
ATOM 8 O4' C B 8 -12.705 34.559 -3.043 1.00 21.32 O
ATOM 9 C3' C B 8 -10.922 34.845 -4.609 1.00 21.39 C
ATOM 10 O3' C B 8 -10.212 33.612 -4.650 1.00 18.09 O
ATOM 11 C2' C B 8 -12.250 34.704 -5.350 1.00 20.84 C
ATOM 12 O2' C B 8 -12.171 33.905 -6.512 1.00 20.48 O
ATOM 13 C1' C B 8 -13.135 34.053 -4.287 1.00 20.38 C
ATOM 14 N1 C B 8 -14.562 34.371 -4.444 1.00 19.26 N
ATOM 15 C2 C B 8 -15.461 33.332 -4.702 1.00 19.37 C
ATOM 16 O2 C B 8 -15.033 32.170 -4.770 1.00 20.91 O
ATOM 17 N3 C B 8 -16.772 33.617 -4.867 1.00 17.76 N
ATOM 18 C4 C B 8 -17.195 34.879 -4.777 1.00 19.12 C
ATOM 19 N4 C B 8 -18.496 35.116 -4.944 1.00 21.47 N
ATOM 20 C5 C B 8 -16.301 35.956 -4.510 1.00 20.14 C
ATOM 21 C6 C B 8 -15.006 35.660 -4.351 1.00 19.62 C
ATOM 22 P G B 9 -8.620 33.607 -4.424 1.00 14.61 P
ATOM 23 OP1 G B 9 -8.116 32.269 -4.825 1.00 15.47 O
ATOM 24 OP2 G B 9 -8.341 34.117 -3.055 1.00 13.65 O
ATOM 25 O5' G B 9 -8.084 34.679 -5.473 1.00 14.73 O
TER
ATOM 2 P G A 21 -25.240 34.358 -6.174 1.00 43.82 P
ATOM 3 OP1 G A 21 -26.324 34.225 -7.181 1.00 44.28 O
ATOM 4 OP2 G A 21 -23.980 33.591 -6.345 1.00 45.67 O
ATOM 5 O5' G A 21 -24.867 35.902 -6.051 1.00 45.58 O
ATOM 6 C5' G A 21 -25.887 36.879 -5.876 1.00 46.53 C
ATOM 7 C4' G A 21 -25.311 38.269 -5.994 1.00 45.57 C
ATOM 8 O4' G A 21 -24.440 38.553 -4.869 1.00 44.93 O
ATOM 9 C3' G A 21 -24.427 38.526 -7.199 1.00 45.70 C
ATOM 10 O3' G A 21 -25.209 38.775 -8.359 1.00 49.09 O
ATOM 11 C2' G A 21 -23.654 39.764 -6.760 1.00 45.65 C
ATOM 12 O2' G A 21 -24.397 40.955 -6.922 1.00 45.97 O
ATOM 13 C1' G A 21 -23.451 39.488 -5.268 1.00 44.99 C
ATOM 14 N9 G A 21 -22.134 38.937 -4.966 1.00 44.11 N
ATOM 15 C8 G A 21 -21.774 37.612 -4.927 1.00 44.36 C
ATOM 16 N7 G A 21 -20.514 37.432 -4.636 1.00 43.89 N
ATOM 17 C5 G A 21 -20.012 38.716 -4.471 1.00 41.45 C
ATOM 18 C6 G A 21 -18.704 39.158 -4.145 1.00 41.18 C
ATOM 19 O6 G A 21 -17.692 38.481 -3.932 1.00 43.25 O
ATOM 20 N1 G A 21 -18.634 40.545 -4.076 1.00 40.80 N
ATOM 21 C2 G A 21 -19.685 41.399 -4.293 1.00 41.85 C
ATOM 22 N2 G A 21 -19.414 42.709 -4.181 1.00 41.71 N
ATOM 23 N3 G A 21 -20.910 41.001 -4.597 1.00 41.84 N
ATOM 24 C4 G A 21 -21.000 39.656 -4.669 1.00 42.35 C
ATOM 25 P A A 22 -24.481 38.997 -9.773 1.00 50.65 P
ATOM 26 OP1 A A 22 -25.522 39.040 -10.833 1.00 52.67 O
ATOM 27 OP2 A A 22 -23.373 38.014 -9.872 1.00 51.88 O
ATOM 28 O5' A A 22 -23.845 40.449 -9.637 1.00 46.40 O
TER
ATOM 1 O3' U B 7 -10.978 35.773 1.015 1.00 28.63 O
ATOM 2 P C B 8 -10.332 36.420 -0.307 1.00 28.43 P
ATOM 3 OP1 C B 8 -9.383 35.435 -0.888 1.00 27.97 O
ATOM 4 OP2 C B 8 -9.851 37.782 0.047 1.00 31.63 O
ATOM 5 O5' C B 8 -11.563 36.577 -1.305 1.00 26.78 O
ATOM 6 C5' C B 8 -11.356 36.523 -2.711 1.00 24.57 C
ATOM 7 C4' C B 8 -11.358 35.087 -3.168 1.00 22.73 C
ATOM 8 O4' C B 8 -12.705 34.559 -3.043 1.00 21.32 O
ATOM 9 C3' C B 8 -10.922 34.845 -4.609 1.00 21.39 C
ATOM 10 O3' C B 8 -10.212 33.612 -4.650 1.00 18.09 O
ATOM 11 C2' C B 8 -12.250 34.704 -5.350 1.00 20.84 C
ATOM 12 O2' C B 8 -12.171 33.905 -6.512 1.00 20.48 O
ATOM 13 C1' C B 8 -13.135 34.053 -4.287 1.00 20.38 C
ATOM 14 N1 C B 8 -14.562 34.371 -4.444 1.00 19.26 N
ATOM 15 C2 C B 8 -15.461 33.332 -4.702 1.00 19.37 C
ATOM 16 O2 C B 8 -15.033 32.170 -4.770 1.00 20.91 O
ATOM 17 N3 C B 8 -16.772 33.617 -4.867 1.00 17.76 N
ATOM 18 C4 C B 8 -17.195 34.879 -4.777 1.00 19.12 C
ATOM 19 N4 C B 8 -18.496 35.116 -4.944 1.00 21.47 N
ATOM 20 C5 C B 8 -16.301 35.956 -4.510 1.00 20.14 C
ATOM 21 C6 C B 8 -15.006 35.660 -4.351 1.00 19.62 C
ATOM 22 P G B 9 -8.620 33.607 -4.424 1.00 14.61 P
ATOM 23 OP1 G B 9 -8.116 32.269 -4.825 1.00 15.47 O
ATOM 24 OP2 G B 9 -8.341 34.117 -3.055 1.00 13.65 O
ATOM 25 O5' G B 9 -8.084 34.679 -5.473 1.00 14.73 O
TER
Atoms:
OP1: (-26.324,34.225,-7.181)
OP2: (-23.980,33.591,-6.345)
C3': (-24.427,38.526,-7.199)
C1': (-23.451,39.488,-5.268)
C5': (-25.887,36.879,-5.876)
O6: (-17.692,38.481,-3.932)
O4': (-24.440,38.553,-4.869)
C8: (-21.774,37.612,-4.927)
C2: (-19.685,41.399,-4.293)
C6: (-18.704,39.158,-4.145)
C5: (-20.012,38.716,-4.471)
C4: (-21.000,39.656,-4.669)
P: (-25.240,34.358,-6.174)
C4': (-25.311,38.269,-5.994)
C2': (-23.654,39.764,-6.760)
O2': (-24.397,40.955,-6.922)
N1: (-18.634,40.545,-4.076)
N2: (-19.414,42.709,-4.181)
N3: (-20.910,41.001,-4.597)
N7: (-20.514,37.432,-4.636)
N9: (-22.134,38.937,-4.966)
O5': (-24.867,35.902,-6.051)
O3': (-25.209,38.775,-8.359)
OP2: (-23.980,33.591,-6.345)
C3': (-24.427,38.526,-7.199)
C1': (-23.451,39.488,-5.268)
C5': (-25.887,36.879,-5.876)
O6: (-17.692,38.481,-3.932)
O4': (-24.440,38.553,-4.869)
C8: (-21.774,37.612,-4.927)
C2: (-19.685,41.399,-4.293)
C6: (-18.704,39.158,-4.145)
C5: (-20.012,38.716,-4.471)
C4: (-21.000,39.656,-4.669)
P: (-25.240,34.358,-6.174)
C4': (-25.311,38.269,-5.994)
C2': (-23.654,39.764,-6.760)
O2': (-24.397,40.955,-6.922)
N1: (-18.634,40.545,-4.076)
N2: (-19.414,42.709,-4.181)
N3: (-20.910,41.001,-4.597)
N7: (-20.514,37.432,-4.636)
N9: (-22.134,38.937,-4.966)
O5': (-24.867,35.902,-6.051)
O3': (-25.209,38.775,-8.359)
C2: (-15.461,33.332,-4.702)
OP1: (-9.383,35.435,-0.888)
OP2: (-9.851,37.782,0.047)
C4: (-17.195,34.879,-4.777)
O5': (-11.563,36.577,-1.305)
C3': (-10.922,34.845,-4.609)
C1': (-13.135,34.053,-4.287)
O4': (-12.705,34.559,-3.043)
C5': (-11.356,36.523,-2.711)
P: (-10.332,36.420,-0.307)
O2: (-15.033,32.170,-4.770)
C4': (-11.358,35.087,-3.168)
C2': (-12.250,34.704,-5.350)
O2': (-12.171,33.905,-6.512)
N1: (-14.562,34.371,-4.444)
N3: (-16.772,33.617,-4.867)
N4: (-18.496,35.116,-4.944)
C6: (-15.006,35.660,-4.351)
C5: (-16.301,35.956,-4.510)
O3': (-10.212,33.612,-4.650)
OP1: (-9.383,35.435,-0.888)
OP2: (-9.851,37.782,0.047)
C4: (-17.195,34.879,-4.777)
O5': (-11.563,36.577,-1.305)
C3': (-10.922,34.845,-4.609)
C1': (-13.135,34.053,-4.287)
O4': (-12.705,34.559,-3.043)
C5': (-11.356,36.523,-2.711)
P: (-10.332,36.420,-0.307)
O2: (-15.033,32.170,-4.770)
C4': (-11.358,35.087,-3.168)
C2': (-12.250,34.704,-5.350)
O2': (-12.171,33.905,-6.512)
N1: (-14.562,34.371,-4.444)
N3: (-16.772,33.617,-4.867)
N4: (-18.496,35.116,-4.944)
C6: (-15.006,35.660,-4.351)
C5: (-16.301,35.956,-4.510)
O3': (-10.212,33.612,-4.650)
Image (generated by PyMOL):