Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0153:0158
Extra
PDB:
ATOM 1 O3' G A 152 64.420 102.189 63.391 1.00 30.21 O
ATOM 2 P A A 153 64.973 101.573 64.764 1.00 30.81 P
ATOM 3 OP1 A A 153 63.854 100.883 65.443 1.00 30.85 O
ATOM 4 OP2 A A 153 65.682 102.672 65.460 1.00 31.10 O
ATOM 5 O5' A A 153 66.026 100.478 64.282 1.00 28.31 O
ATOM 6 C5' A A 153 65.598 99.391 63.445 1.00 28.04 C
ATOM 7 C4' A A 153 66.781 98.613 62.918 1.00 27.04 C
ATOM 8 O4' A A 153 67.633 99.478 62.128 1.00 27.95 O
ATOM 9 C3' A A 153 67.716 97.984 63.937 1.00 25.57 C
ATOM 10 O3' A A 153 67.147 96.762 64.403 1.00 26.72 O
ATOM 11 C2' A A 153 68.982 97.784 63.107 1.00 26.29 C
ATOM 12 O2' A A 153 68.895 96.663 62.243 1.00 26.29 O
ATOM 13 C1' A A 153 68.981 99.051 62.246 1.00 26.22 C
ATOM 14 N9 A A 153 69.760 100.156 62.804 1.00 26.01 N
ATOM 15 C8 A A 153 69.316 101.156 63.634 1.00 25.93 C
ATOM 16 N7 A A 153 70.246 102.009 63.977 1.00 26.16 N
ATOM 17 C5 A A 153 71.381 101.545 63.328 1.00 25.59 C
ATOM 18 C6 A A 153 72.702 102.009 63.295 1.00 25.85 C
ATOM 19 N6 A A 153 73.113 103.101 63.939 1.00 30.36 N
ATOM 20 N1 A A 153 73.598 101.310 62.570 1.00 25.01 N
ATOM 21 C2 A A 153 73.183 100.230 61.914 1.00 24.58 C
ATOM 22 N3 A A 153 71.964 99.695 61.857 1.00 28.07 N
ATOM 23 C4 A A 153 71.098 100.407 62.601 1.00 26.82 C
ATOM 24 P A A 154 67.888 95.890 65.538 1.00 27.77 P
ATOM 25 OP1 A A 154 69.331 95.775 65.221 1.00 24.14 O
ATOM 26 OP2 A A 154 67.077 94.650 65.685 1.00 29.11 O
ATOM 27 O5' A A 154 67.728 96.748 66.869 1.00 26.47 O
TER
ATOM 1 O3' A B 157 80.552 102.316 59.968 1.00 29.17 O
ATOM 2 P U B 158 80.057 103.125 58.676 1.00 30.08 P
ATOM 3 OP1 U B 158 81.205 103.970 58.262 1.00 29.60 O
ATOM 4 OP2 U B 158 78.745 103.756 58.959 1.00 26.94 O
ATOM 5 O5' U B 158 79.836 101.996 57.577 1.00 29.48 O
ATOM 6 C5' U B 158 80.950 101.279 57.014 1.00 28.86 C
ATOM 7 C4' U B 158 80.473 100.010 56.350 1.00 29.59 C
ATOM 8 O4' U B 158 80.094 99.023 57.348 1.00 31.06 O
ATOM 9 C3' U B 158 79.225 100.127 55.490 1.00 29.02 C
ATOM 10 O3' U B 158 79.486 100.659 54.204 1.00 28.63 O
ATOM 11 C2' U B 158 78.771 98.679 55.395 1.00 29.74 C
ATOM 12 O2' U B 158 79.504 97.928 54.459 1.00 29.97 O
ATOM 13 C1' U B 158 79.091 98.170 56.801 1.00 31.71 C
ATOM 14 N1 U B 158 77.892 98.184 57.654 1.00 33.42 N
ATOM 15 C2 U B 158 76.959 97.184 57.437 1.00 32.92 C
ATOM 16 O2 U B 158 77.120 96.298 56.621 1.00 34.55 O
ATOM 17 N3 U B 158 75.838 97.257 58.217 1.00 32.63 N
ATOM 18 C4 U B 158 75.568 98.189 59.190 1.00 33.19 C
ATOM 19 O4 U B 158 74.539 98.083 59.849 1.00 34.14 O
ATOM 20 C5 U B 158 76.585 99.181 59.372 1.00 32.85 C
ATOM 21 C6 U B 158 77.682 99.148 58.617 1.00 32.76 C
ATOM 22 P C B 159 78.354 101.513 53.457 1.00 28.57 P
ATOM 23 OP1 C B 159 78.644 101.469 52.008 1.00 29.28 O
ATOM 24 OP2 C B 159 78.245 102.812 54.147 1.00 30.89 O
ATOM 25 O5' C B 159 76.993 100.738 53.735 1.00 27.85 O
TER
ATOM 2 P A A 153 64.973 101.573 64.764 1.00 30.81 P
ATOM 3 OP1 A A 153 63.854 100.883 65.443 1.00 30.85 O
ATOM 4 OP2 A A 153 65.682 102.672 65.460 1.00 31.10 O
ATOM 5 O5' A A 153 66.026 100.478 64.282 1.00 28.31 O
ATOM 6 C5' A A 153 65.598 99.391 63.445 1.00 28.04 C
ATOM 7 C4' A A 153 66.781 98.613 62.918 1.00 27.04 C
ATOM 8 O4' A A 153 67.633 99.478 62.128 1.00 27.95 O
ATOM 9 C3' A A 153 67.716 97.984 63.937 1.00 25.57 C
ATOM 10 O3' A A 153 67.147 96.762 64.403 1.00 26.72 O
ATOM 11 C2' A A 153 68.982 97.784 63.107 1.00 26.29 C
ATOM 12 O2' A A 153 68.895 96.663 62.243 1.00 26.29 O
ATOM 13 C1' A A 153 68.981 99.051 62.246 1.00 26.22 C
ATOM 14 N9 A A 153 69.760 100.156 62.804 1.00 26.01 N
ATOM 15 C8 A A 153 69.316 101.156 63.634 1.00 25.93 C
ATOM 16 N7 A A 153 70.246 102.009 63.977 1.00 26.16 N
ATOM 17 C5 A A 153 71.381 101.545 63.328 1.00 25.59 C
ATOM 18 C6 A A 153 72.702 102.009 63.295 1.00 25.85 C
ATOM 19 N6 A A 153 73.113 103.101 63.939 1.00 30.36 N
ATOM 20 N1 A A 153 73.598 101.310 62.570 1.00 25.01 N
ATOM 21 C2 A A 153 73.183 100.230 61.914 1.00 24.58 C
ATOM 22 N3 A A 153 71.964 99.695 61.857 1.00 28.07 N
ATOM 23 C4 A A 153 71.098 100.407 62.601 1.00 26.82 C
ATOM 24 P A A 154 67.888 95.890 65.538 1.00 27.77 P
ATOM 25 OP1 A A 154 69.331 95.775 65.221 1.00 24.14 O
ATOM 26 OP2 A A 154 67.077 94.650 65.685 1.00 29.11 O
ATOM 27 O5' A A 154 67.728 96.748 66.869 1.00 26.47 O
TER
ATOM 1 O3' A B 157 80.552 102.316 59.968 1.00 29.17 O
ATOM 2 P U B 158 80.057 103.125 58.676 1.00 30.08 P
ATOM 3 OP1 U B 158 81.205 103.970 58.262 1.00 29.60 O
ATOM 4 OP2 U B 158 78.745 103.756 58.959 1.00 26.94 O
ATOM 5 O5' U B 158 79.836 101.996 57.577 1.00 29.48 O
ATOM 6 C5' U B 158 80.950 101.279 57.014 1.00 28.86 C
ATOM 7 C4' U B 158 80.473 100.010 56.350 1.00 29.59 C
ATOM 8 O4' U B 158 80.094 99.023 57.348 1.00 31.06 O
ATOM 9 C3' U B 158 79.225 100.127 55.490 1.00 29.02 C
ATOM 10 O3' U B 158 79.486 100.659 54.204 1.00 28.63 O
ATOM 11 C2' U B 158 78.771 98.679 55.395 1.00 29.74 C
ATOM 12 O2' U B 158 79.504 97.928 54.459 1.00 29.97 O
ATOM 13 C1' U B 158 79.091 98.170 56.801 1.00 31.71 C
ATOM 14 N1 U B 158 77.892 98.184 57.654 1.00 33.42 N
ATOM 15 C2 U B 158 76.959 97.184 57.437 1.00 32.92 C
ATOM 16 O2 U B 158 77.120 96.298 56.621 1.00 34.55 O
ATOM 17 N3 U B 158 75.838 97.257 58.217 1.00 32.63 N
ATOM 18 C4 U B 158 75.568 98.189 59.190 1.00 33.19 C
ATOM 19 O4 U B 158 74.539 98.083 59.849 1.00 34.14 O
ATOM 20 C5 U B 158 76.585 99.181 59.372 1.00 32.85 C
ATOM 21 C6 U B 158 77.682 99.148 58.617 1.00 32.76 C
ATOM 22 P C B 159 78.354 101.513 53.457 1.00 28.57 P
ATOM 23 OP1 C B 159 78.644 101.469 52.008 1.00 29.28 O
ATOM 24 OP2 C B 159 78.245 102.812 54.147 1.00 30.89 O
ATOM 25 O5' C B 159 76.993 100.738 53.735 1.00 27.85 O
TER
Atoms:
OP1: (63.854,100.883,65.443)
OP2: (65.682,102.672,65.460)
C3': (67.716,97.984,63.937)
C1': (68.981,99.051,62.246)
C5': (65.598,99.391,63.445)
O4': (67.633,99.478,62.128)
C8: (69.316,101.156,63.634)
O2': (68.895,96.663,62.243)
C6: (72.702,102.009,63.295)
C5: (71.381,101.545,63.328)
C4: (71.098,100.407,62.601)
P: (64.973,101.573,64.764)
C4': (66.781,98.613,62.918)
C2': (68.982,97.784,63.107)
C2: (73.183,100.230,61.914)
N1: (73.598,101.310,62.570)
N3: (71.964,99.695,61.857)
N6: (73.113,103.101,63.939)
N7: (70.246,102.009,63.977)
N9: (69.760,100.156,62.804)
O5': (66.026,100.478,64.282)
O3': (67.147,96.762,64.403)
OP2: (65.682,102.672,65.460)
C3': (67.716,97.984,63.937)
C1': (68.981,99.051,62.246)
C5': (65.598,99.391,63.445)
O4': (67.633,99.478,62.128)
C8: (69.316,101.156,63.634)
O2': (68.895,96.663,62.243)
C6: (72.702,102.009,63.295)
C5: (71.381,101.545,63.328)
C4: (71.098,100.407,62.601)
P: (64.973,101.573,64.764)
C4': (66.781,98.613,62.918)
C2': (68.982,97.784,63.107)
C2: (73.183,100.230,61.914)
N1: (73.598,101.310,62.570)
N3: (71.964,99.695,61.857)
N6: (73.113,103.101,63.939)
N7: (70.246,102.009,63.977)
N9: (69.760,100.156,62.804)
O5': (66.026,100.478,64.282)
O3': (67.147,96.762,64.403)
C4: (75.568,98.189,59.190)
N3: (75.838,97.257,58.217)
OP1: (81.205,103.970,58.262)
OP2: (78.745,103.756,58.959)
C2: (76.959,97.184,57.437)
C1': (79.091,98.170,56.801)
C3': (79.225,100.127,55.490)
O5': (79.836,101.996,57.577)
O4': (80.094,99.023,57.348)
C5': (80.950,101.279,57.014)
P: (80.057,103.125,58.676)
C4': (80.473,100.010,56.350)
C2': (78.771,98.679,55.395)
O2': (79.504,97.928,54.459)
N1: (77.892,98.184,57.654)
O4: (74.539,98.083,59.849)
O2: (77.120,96.298,56.621)
C6: (77.682,99.148,58.617)
C5: (76.585,99.181,59.372)
O3': (79.486,100.659,54.204)
N3: (75.838,97.257,58.217)
OP1: (81.205,103.970,58.262)
OP2: (78.745,103.756,58.959)
C2: (76.959,97.184,57.437)
C1': (79.091,98.170,56.801)
C3': (79.225,100.127,55.490)
O5': (79.836,101.996,57.577)
O4': (80.094,99.023,57.348)
C5': (80.950,101.279,57.014)
P: (80.057,103.125,58.676)
C4': (80.473,100.010,56.350)
C2': (78.771,98.679,55.395)
O2': (79.504,97.928,54.459)
N1: (77.892,98.184,57.654)
O4: (74.539,98.083,59.849)
O2: (77.120,96.298,56.621)
C6: (77.682,99.148,58.617)
C5: (76.585,99.181,59.372)
O3': (79.486,100.659,54.204)
Image (generated by PyMOL):