ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CMA:0659:0663

Extra

PDB:
ATOM 1 O3' G A 658 31.111 108.149 17.618 1.00 42.31 O
ATOM 2 P A A 659 30.844 109.725 17.638 1.00 44.09 P
ATOM 3 OP1 A A 659 29.851 110.028 16.570 1.00 45.51 O
ATOM 4 OP2 A A 659 32.159 110.417 17.637 1.00 46.67 O
ATOM 5 O5' A A 659 30.142 109.974 19.040 1.00 41.15 O
ATOM 6 C5' A A 659 28.800 109.545 19.271 1.00 38.69 C
ATOM 7 C4' A A 659 28.460 109.730 20.714 1.00 38.29 C
ATOM 8 O4' A A 659 29.381 108.937 21.499 1.00 38.65 O
ATOM 9 C3' A A 659 28.634 111.148 21.232 1.00 37.21 C
ATOM 10 O3' A A 659 27.454 111.910 20.975 1.00 37.60 O
ATOM 11 C2' A A 659 28.882 110.914 22.713 1.00 37.75 C
ATOM 12 O2' A A 659 27.695 110.649 23.430 1.00 36.60 O
ATOM 13 C1' A A 659 29.728 109.640 22.673 1.00 38.61 C
ATOM 14 N9 A A 659 31.165 109.893 22.631 1.00 40.73 N
ATOM 15 C8 A A 659 31.983 109.965 21.531 1.00 40.76 C
ATOM 16 N7 A A 659 33.238 110.198 21.820 1.00 40.58 N
ATOM 17 C5 A A 659 33.248 110.291 23.204 1.00 40.79 C
ATOM 18 C6 A A 659 34.274 110.526 24.122 1.00 40.55 C
ATOM 19 N6 A A 659 35.542 110.731 23.772 1.00 41.75 N
ATOM 20 N1 A A 659 33.952 110.547 25.432 1.00 41.65 N
ATOM 21 C2 A A 659 32.675 110.347 25.782 1.00 42.45 C
ATOM 22 N3 A A 659 31.619 110.122 25.012 1.00 40.96 N
ATOM 23 C4 A A 659 31.978 110.104 23.716 1.00 41.54 C
ATOM 24 P G A 660 27.441 113.499 21.221 1.00 36.25 P
ATOM 25 OP1 G A 660 26.298 114.046 20.447 1.00 36.95 O
ATOM 26 OP2 G A 660 28.807 114.031 20.988 1.00 37.40 O
ATOM 27 O5' G A 660 27.086 113.649 22.763 1.00 36.91 O
TER

ATOM 1 O3' A B 662 36.408 110.778 32.823 1.00 43.15 O
ATOM 2 P U B 663 35.933 109.348 32.291 1.00 42.09 P
ATOM 3 OP1 U B 663 36.872 108.347 32.842 1.00 43.94 O
ATOM 4 OP2 U B 663 35.764 109.467 30.822 1.00 42.78 O
ATOM 5 O5' U B 663 34.511 109.147 32.975 1.00 41.10 O
ATOM 6 C5' U B 663 34.357 109.279 34.394 1.00 37.47 C
ATOM 7 C4' U B 663 32.915 109.547 34.730 1.00 37.76 C
ATOM 8 O4' U B 663 32.487 110.728 34.006 1.00 39.26 O
ATOM 9 C3' U B 663 31.923 108.487 34.283 1.00 36.73 C
ATOM 10 O3' U B 663 31.839 107.404 35.182 1.00 33.88 O
ATOM 11 C2' U B 663 30.627 109.271 34.219 1.00 37.76 C
ATOM 12 O2' U B 663 30.069 109.523 35.491 1.00 37.55 O
ATOM 13 C1' U B 663 31.126 110.584 33.623 1.00 40.14 C
ATOM 14 N1 U B 663 31.040 110.597 32.153 1.00 41.83 N
ATOM 15 C2 U B 663 29.810 110.900 31.599 1.00 41.91 C
ATOM 16 O2 U B 663 28.816 111.111 32.274 1.00 42.94 O
ATOM 17 N3 U B 663 29.783 110.936 30.227 1.00 42.49 N
ATOM 18 C4 U B 663 30.833 110.693 29.369 1.00 42.41 C
ATOM 19 O4 U B 663 30.654 110.799 28.156 1.00 43.44 O
ATOM 20 C5 U B 663 32.072 110.362 30.015 1.00 41.63 C
ATOM 21 C6 U B 663 32.133 110.326 31.350 1.00 41.13 C
ATOM 22 P C B 664 32.093 105.926 34.639 1.00 34.38 P
ATOM 23 OP1 C B 664 31.736 104.995 35.732 1.00 35.34 O
ATOM 24 OP2 C B 664 33.451 105.883 34.065 1.00 33.98 O
ATOM 25 O5' C B 664 31.037 105.776 33.453 1.00 35.16 O
TER

Atoms:
OP1: (29.851,110.028,16.570)
OP2: (32.159,110.417,17.637)
C3': (28.634,111.148,21.232)
C1': (29.728,109.640,22.673)
C5': (28.800,109.545,19.271)
O4': (29.381,108.937,21.499)
C8: (31.983,109.965,21.531)
O2': (27.695,110.649,23.430)
C6: (34.274,110.526,24.122)
C5: (33.248,110.291,23.204)
C4: (31.978,110.104,23.716)
P: (30.844,109.725,17.638)
C4': (28.460,109.730,20.714)
C2': (28.882,110.914,22.713)
C2: (32.675,110.347,25.782)
N1: (33.952,110.547,25.432)
N3: (31.619,110.122,25.012)
N6: (35.542,110.731,23.772)
N7: (33.238,110.198,21.820)
N9: (31.165,109.893,22.631)
O5': (30.142,109.974,19.040)
O3': (27.454,111.910,20.975)
C4: (30.833,110.693,29.369)
N3: (29.783,110.936,30.227)
OP1: (36.872,108.347,32.842)
OP2: (35.764,109.467,30.822)
C2: (29.810,110.900,31.599)
C1': (31.126,110.584,33.623)
C3': (31.923,108.487,34.283)
O5': (34.511,109.147,32.975)
O4': (32.487,110.728,34.006)
C5': (34.357,109.279,34.394)
P: (35.933,109.348,32.291)
C4': (32.915,109.547,34.730)
C2': (30.627,109.271,34.219)
O2': (30.069,109.523,35.491)
N1: (31.040,110.597,32.153)
O4: (30.654,110.799,28.156)
O2: (28.816,111.111,32.274)
C6: (32.133,110.326,31.350)
C5: (32.072,110.362,30.015)
O3': (31.839,107.404,35.182)
Image (generated by PyMOL):
PyMOL image
show in jmol