Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:136:141
Extra
PDB:
ATOM 1 O3' U A 35 44.801 -26.656 83.196 1.00 32.71 O
ATOM 2 P A A 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 3 OP1 A A 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 4 OP2 A A 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 5 O5' A A 36 42.801 -27.838 82.224 1.00 34.58 O
ATOM 6 C5' A A 36 43.275 -29.132 81.954 1.00 34.71 C
ATOM 7 C4' A A 36 42.543 -30.149 82.767 1.00 34.91 C
ATOM 8 O4' A A 36 42.145 -29.560 84.004 1.00 34.96 O
ATOM 9 C3' A A 36 41.245 -30.612 82.191 1.00 34.89 C
ATOM 10 O3' A A 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 11 C2' A A 36 40.496 -31.153 83.402 1.00 35.07 C
ATOM 12 O2' A A 36 40.950 -32.452 83.722 1.00 35.29 O
ATOM 13 C1' A A 36 40.987 -30.213 84.487 1.00 35.07 C
ATOM 14 N9 A A 36 39.992 -29.216 84.889 1.00 34.98 N
ATOM 15 C8 A A 36 39.920 -27.953 84.414 1.00 34.78 C
ATOM 16 N7 A A 36 38.907 -27.329 84.921 1.00 34.76 N
ATOM 17 C5 A A 36 38.305 -28.158 85.773 1.00 34.95 C
ATOM 18 C6 A A 36 37.194 -27.954 86.538 1.00 35.02 C
ATOM 19 N6 A A 36 36.551 -26.786 86.558 1.00 34.90 N
ATOM 20 N1 A A 36 36.793 -28.992 87.285 1.00 35.24 N
ATOM 21 C2 A A 36 37.488 -30.124 87.195 1.00 35.36 C
ATOM 22 N3 A A 36 38.573 -30.421 86.474 1.00 35.31 N
ATOM 23 C4 A A 36 38.949 -29.357 85.773 1.00 35.10 C
ATOM 24 P A A 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 25 OP1 A A 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 26 OP2 A A 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 27 O5' A A 37 39.945 -30.432 79.550 1.00 31.29 O
TER
ATOM 1 O3' A B 40 31.574 -29.430 92.911 1.00 42.56 O
ATOM 2 P U B 41 32.680 -29.436 94.053 1.00 38.45 P
ATOM 3 OP1 U B 41 32.027 -29.097 95.336 1.00 38.64 O
ATOM 4 OP2 U B 41 33.802 -28.566 93.556 1.00 38.25 O
ATOM 5 O5' U B 41 33.152 -30.936 94.055 1.00 38.63 O
ATOM 6 C5' U B 41 32.314 -31.939 94.565 1.00 38.86 C
ATOM 7 C4' U B 41 32.908 -33.293 94.344 1.00 38.99 C
ATOM 8 O4' U B 41 32.796 -33.670 92.961 1.00 38.83 O
ATOM 9 C3' U B 41 34.385 -33.435 94.613 1.00 39.04 C
ATOM 10 O3' U B 41 34.683 -33.432 95.983 1.00 39.28 O
ATOM 11 C2' U B 41 34.660 -34.749 93.932 1.00 39.12 C
ATOM 12 O2' U B 41 34.141 -35.823 94.688 1.00 39.42 O
ATOM 13 C1' U B 41 33.803 -34.597 92.666 1.00 38.90 C
ATOM 14 N1 U B 41 34.598 -34.069 91.589 1.00 38.65 N
ATOM 15 C2 U B 41 35.512 -34.994 91.153 1.00 38.72 C
ATOM 16 O2 U B 41 35.515 -36.153 91.576 1.00 38.96 O
ATOM 17 N3 U B 41 36.380 -34.535 90.216 1.00 38.51 N
ATOM 18 C4 U B 41 36.362 -33.281 89.737 1.00 38.26 C
ATOM 19 O4 U B 41 37.167 -33.046 88.897 1.00 38.11 O
ATOM 20 C5 U B 41 35.418 -32.374 90.258 1.00 38.21 C
ATOM 21 C6 U B 41 34.559 -32.774 91.189 1.00 38.40 C
ATOM 22 P A B 42 36.069 -32.795 96.539 1.00 36.73 P
ATOM 23 OP1 A B 42 36.364 -33.490 97.828 1.00 37.07 O
ATOM 24 OP2 A B 42 35.930 -31.316 96.521 1.00 36.53 O
ATOM 25 O5' A B 42 37.138 -33.229 95.463 1.00 36.60 O
TER
ATOM 2 P A A 36 43.707 -26.560 82.010 1.00 34.43 P
ATOM 3 OP1 A A 36 44.434 -26.650 80.724 1.00 34.34 O
ATOM 4 OP2 A A 36 42.887 -25.373 82.292 1.00 34.32 O
ATOM 5 O5' A A 36 42.801 -27.838 82.224 1.00 34.58 O
ATOM 6 C5' A A 36 43.275 -29.132 81.954 1.00 34.71 C
ATOM 7 C4' A A 36 42.543 -30.149 82.767 1.00 34.91 C
ATOM 8 O4' A A 36 42.145 -29.560 84.004 1.00 34.96 O
ATOM 9 C3' A A 36 41.245 -30.612 82.191 1.00 34.89 C
ATOM 10 O3' A A 36 41.420 -31.549 81.161 1.00 34.92 O
ATOM 11 C2' A A 36 40.496 -31.153 83.402 1.00 35.07 C
ATOM 12 O2' A A 36 40.950 -32.452 83.722 1.00 35.29 O
ATOM 13 C1' A A 36 40.987 -30.213 84.487 1.00 35.07 C
ATOM 14 N9 A A 36 39.992 -29.216 84.889 1.00 34.98 N
ATOM 15 C8 A A 36 39.920 -27.953 84.414 1.00 34.78 C
ATOM 16 N7 A A 36 38.907 -27.329 84.921 1.00 34.76 N
ATOM 17 C5 A A 36 38.305 -28.158 85.773 1.00 34.95 C
ATOM 18 C6 A A 36 37.194 -27.954 86.538 1.00 35.02 C
ATOM 19 N6 A A 36 36.551 -26.786 86.558 1.00 34.90 N
ATOM 20 N1 A A 36 36.793 -28.992 87.285 1.00 35.24 N
ATOM 21 C2 A A 36 37.488 -30.124 87.195 1.00 35.36 C
ATOM 22 N3 A A 36 38.573 -30.421 86.474 1.00 35.31 N
ATOM 23 C4 A A 36 38.949 -29.357 85.773 1.00 35.10 C
ATOM 24 P A A 37 40.196 -31.853 80.185 1.00 31.53 P
ATOM 25 OP1 A A 37 39.079 -32.224 81.045 1.00 31.65 O
ATOM 26 OP2 A A 37 40.693 -32.827 79.133 1.00 31.59 O
ATOM 27 O5' A A 37 39.945 -30.432 79.550 1.00 31.29 O
TER
ATOM 1 O3' A B 40 31.574 -29.430 92.911 1.00 42.56 O
ATOM 2 P U B 41 32.680 -29.436 94.053 1.00 38.45 P
ATOM 3 OP1 U B 41 32.027 -29.097 95.336 1.00 38.64 O
ATOM 4 OP2 U B 41 33.802 -28.566 93.556 1.00 38.25 O
ATOM 5 O5' U B 41 33.152 -30.936 94.055 1.00 38.63 O
ATOM 6 C5' U B 41 32.314 -31.939 94.565 1.00 38.86 C
ATOM 7 C4' U B 41 32.908 -33.293 94.344 1.00 38.99 C
ATOM 8 O4' U B 41 32.796 -33.670 92.961 1.00 38.83 O
ATOM 9 C3' U B 41 34.385 -33.435 94.613 1.00 39.04 C
ATOM 10 O3' U B 41 34.683 -33.432 95.983 1.00 39.28 O
ATOM 11 C2' U B 41 34.660 -34.749 93.932 1.00 39.12 C
ATOM 12 O2' U B 41 34.141 -35.823 94.688 1.00 39.42 O
ATOM 13 C1' U B 41 33.803 -34.597 92.666 1.00 38.90 C
ATOM 14 N1 U B 41 34.598 -34.069 91.589 1.00 38.65 N
ATOM 15 C2 U B 41 35.512 -34.994 91.153 1.00 38.72 C
ATOM 16 O2 U B 41 35.515 -36.153 91.576 1.00 38.96 O
ATOM 17 N3 U B 41 36.380 -34.535 90.216 1.00 38.51 N
ATOM 18 C4 U B 41 36.362 -33.281 89.737 1.00 38.26 C
ATOM 19 O4 U B 41 37.167 -33.046 88.897 1.00 38.11 O
ATOM 20 C5 U B 41 35.418 -32.374 90.258 1.00 38.21 C
ATOM 21 C6 U B 41 34.559 -32.774 91.189 1.00 38.40 C
ATOM 22 P A B 42 36.069 -32.795 96.539 1.00 36.73 P
ATOM 23 OP1 A B 42 36.364 -33.490 97.828 1.00 37.07 O
ATOM 24 OP2 A B 42 35.930 -31.316 96.521 1.00 36.53 O
ATOM 25 O5' A B 42 37.138 -33.229 95.463 1.00 36.60 O
TER
Atoms:
OP1: (44.434,-26.650,80.724)
OP2: (42.887,-25.373,82.292)
C3': (41.245,-30.612,82.191)
C1': (40.987,-30.213,84.487)
C5': (43.275,-29.132,81.954)
O4': (42.145,-29.560,84.004)
C8: (39.920,-27.953,84.414)
O2': (40.950,-32.452,83.722)
C6: (37.194,-27.954,86.538)
C5: (38.305,-28.158,85.773)
C4: (38.949,-29.357,85.773)
P: (43.707,-26.560,82.010)
C4': (42.543,-30.149,82.767)
C2': (40.496,-31.153,83.402)
C2: (37.488,-30.124,87.195)
N1: (36.793,-28.992,87.285)
N3: (38.573,-30.421,86.474)
N6: (36.551,-26.786,86.558)
N7: (38.907,-27.329,84.921)
N9: (39.992,-29.216,84.889)
O5': (42.801,-27.838,82.224)
O3': (41.420,-31.549,81.161)
OP2: (42.887,-25.373,82.292)
C3': (41.245,-30.612,82.191)
C1': (40.987,-30.213,84.487)
C5': (43.275,-29.132,81.954)
O4': (42.145,-29.560,84.004)
C8: (39.920,-27.953,84.414)
O2': (40.950,-32.452,83.722)
C6: (37.194,-27.954,86.538)
C5: (38.305,-28.158,85.773)
C4: (38.949,-29.357,85.773)
P: (43.707,-26.560,82.010)
C4': (42.543,-30.149,82.767)
C2': (40.496,-31.153,83.402)
C2: (37.488,-30.124,87.195)
N1: (36.793,-28.992,87.285)
N3: (38.573,-30.421,86.474)
N6: (36.551,-26.786,86.558)
N7: (38.907,-27.329,84.921)
N9: (39.992,-29.216,84.889)
O5': (42.801,-27.838,82.224)
O3': (41.420,-31.549,81.161)
C4: (36.362,-33.281,89.737)
N3: (36.380,-34.535,90.216)
OP1: (32.027,-29.097,95.336)
OP2: (33.802,-28.566,93.556)
C2: (35.512,-34.994,91.153)
C1': (33.803,-34.597,92.666)
C3': (34.385,-33.435,94.613)
O5': (33.152,-30.936,94.055)
O4': (32.796,-33.670,92.961)
C5': (32.314,-31.939,94.565)
P: (32.680,-29.436,94.053)
C4': (32.908,-33.293,94.344)
C2': (34.660,-34.749,93.932)
O2': (34.141,-35.823,94.688)
N1: (34.598,-34.069,91.589)
O4: (37.167,-33.046,88.897)
O2: (35.515,-36.153,91.576)
C6: (34.559,-32.774,91.189)
C5: (35.418,-32.374,90.258)
O3': (34.683,-33.432,95.983)
N3: (36.380,-34.535,90.216)
OP1: (32.027,-29.097,95.336)
OP2: (33.802,-28.566,93.556)
C2: (35.512,-34.994,91.153)
C1': (33.803,-34.597,92.666)
C3': (34.385,-33.435,94.613)
O5': (33.152,-30.936,94.055)
O4': (32.796,-33.670,92.961)
C5': (32.314,-31.939,94.565)
P: (32.680,-29.436,94.053)
C4': (32.908,-33.293,94.344)
C2': (34.660,-34.749,93.932)
O2': (34.141,-35.823,94.688)
N1: (34.598,-34.069,91.589)
O4: (37.167,-33.046,88.897)
O2: (35.515,-36.153,91.576)
C6: (34.559,-32.774,91.189)
C5: (35.418,-32.374,90.258)
O3': (34.683,-33.432,95.983)
Image (generated by PyMOL):