ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IRW:R15:R36

Extra

PDB:
ATOM 1 O3' C A 14 0.204 -28.581 -5.307 1.00 34.30 O
ATOM 2 P A A 15 -1.176 -28.274 -4.588 1.00 34.35 P
ATOM 3 OP1 A A 15 -1.213 -28.990 -3.301 1.00 34.14 O
ATOM 4 OP2 A A 15 -2.237 -28.454 -5.609 1.00 31.57 O
ATOM 5 O5' A A 15 -1.079 -26.718 -4.279 1.00 35.92 O
ATOM 6 C5' A A 15 -0.016 -26.188 -3.523 1.00 34.82 C
ATOM 7 C4' A A 15 -0.077 -24.680 -3.633 1.00 35.67 C
ATOM 8 O4' A A 15 -0.079 -24.330 -5.043 1.00 34.11 O
ATOM 9 C3' A A 15 -1.345 -24.084 -3.027 1.00 36.21 C
ATOM 10 O3' A A 15 -1.046 -23.010 -2.137 1.00 38.99 O
ATOM 11 C2' A A 15 -2.159 -23.607 -4.224 1.00 35.49 C
ATOM 12 O2' A A 15 -2.805 -22.376 -3.958 1.00 36.90 O
ATOM 13 C1' A A 15 -1.118 -23.425 -5.320 1.00 33.00 C
ATOM 14 N9 A A 15 -1.674 -23.715 -6.638 1.00 32.61 N
ATOM 15 C8 A A 15 -2.003 -24.937 -7.153 1.00 31.24 C
ATOM 16 N7 A A 15 -2.505 -24.884 -8.366 1.00 29.76 N
ATOM 17 C5 A A 15 -2.514 -23.533 -8.664 1.00 31.64 C
ATOM 18 C6 A A 15 -2.935 -22.810 -9.797 1.00 33.41 C
ATOM 19 N6 A A 15 -3.440 -23.384 -10.888 1.00 36.48 N
ATOM 20 N1 A A 15 -2.811 -21.470 -9.775 1.00 35.12 N
ATOM 21 C2 A A 15 -2.301 -20.893 -8.680 1.00 36.33 C
ATOM 22 N3 A A 15 -1.877 -21.461 -7.553 1.00 34.62 N
ATOM 23 C4 A A 15 -2.010 -22.798 -7.610 1.00 33.32 C
ATOM 24 P A A 16 -1.961 -22.782 -0.837 1.00 41.29 P
ATOM 25 OP1 A A 16 -1.541 -23.723 0.226 1.00 41.28 O
ATOM 26 OP2 A A 16 -3.378 -22.750 -1.265 1.00 42.32 O
ATOM 27 O5' A A 16 -1.518 -21.321 -0.402 1.00 41.45 O
TER

ATOM 1 O3' A B 35 -4.733 -15.531 -7.721 1.00 45.25 O
ATOM 2 P C B 36 -4.767 -14.034 -8.233 1.00 46.32 P
ATOM 3 OP1 C B 36 -5.734 -13.298 -7.394 1.00 47.76 O
ATOM 4 OP2 C B 36 -4.955 -14.082 -9.701 1.00 47.65 O
ATOM 5 O5' C B 36 -3.277 -13.542 -7.911 1.00 41.08 O
ATOM 6 C5' C B 36 -3.072 -12.496 -6.999 1.00 36.13 C
ATOM 7 C4' C B 36 -1.869 -12.777 -6.124 1.00 34.68 C
ATOM 8 O4' C B 36 -2.052 -14.012 -5.405 1.00 33.81 O
ATOM 9 C3' C B 36 -0.549 -13.034 -6.825 1.00 34.58 C
ATOM 10 O3' C B 36 0.010 -11.834 -7.353 1.00 34.09 O
ATOM 11 C2' C B 36 0.255 -13.560 -5.640 1.00 34.22 C
ATOM 12 O2' C B 36 0.696 -12.527 -4.786 1.00 35.16 O
ATOM 13 C1' C B 36 -0.783 -14.408 -4.913 1.00 33.17 C
ATOM 14 N1 C B 36 -0.591 -15.858 -5.149 1.00 36.50 N
ATOM 15 C2 C B 36 0.430 -16.526 -4.462 1.00 37.81 C
ATOM 16 O2 C B 36 1.138 -15.888 -3.675 1.00 40.26 O
ATOM 17 N3 C B 36 0.611 -17.852 -4.670 1.00 37.02 N
ATOM 18 C4 C B 36 -0.180 -18.500 -5.526 1.00 38.36 C
ATOM 19 N4 C B 36 0.039 -19.808 -5.699 1.00 40.51 N
ATOM 20 C5 C B 36 -1.225 -17.838 -6.245 1.00 37.69 C
ATOM 21 C6 C B 36 -1.394 -16.528 -6.031 1.00 37.28 C
ATOM 22 P G B 37 0.991 -11.903 -8.614 1.00 33.92 P
ATOM 23 OP1 G B 37 1.023 -10.574 -9.255 1.00 35.35 O
ATOM 24 OP2 G B 37 0.652 -13.103 -9.404 1.00 34.05 O
ATOM 25 O5' G B 37 2.412 -12.169 -7.966 1.00 32.54 O
TER

Atoms:
OP1: (-1.213,-28.990,-3.301)
OP2: (-2.237,-28.454,-5.609)
C3': (-1.345,-24.084,-3.027)
C1': (-1.118,-23.425,-5.320)
C5': (-0.016,-26.188,-3.523)
O4': (-0.079,-24.330,-5.043)
C8: (-2.003,-24.937,-7.153)
O2': (-2.805,-22.376,-3.958)
C6: (-2.935,-22.810,-9.797)
C5: (-2.514,-23.533,-8.664)
C4: (-2.010,-22.798,-7.610)
P: (-1.176,-28.274,-4.588)
C4': (-0.077,-24.680,-3.633)
C2': (-2.159,-23.607,-4.224)
C2: (-2.301,-20.893,-8.680)
N1: (-2.811,-21.470,-9.775)
N3: (-1.877,-21.461,-7.553)
N6: (-3.440,-23.384,-10.888)
N7: (-2.505,-24.884,-8.366)
N9: (-1.674,-23.715,-6.638)
O5': (-1.079,-26.718,-4.279)
O3': (-1.046,-23.010,-2.137)
C2: (0.430,-16.526,-4.462)
OP1: (-5.734,-13.298,-7.394)
OP2: (-4.955,-14.082,-9.701)
C4: (-0.180,-18.500,-5.526)
O5': (-3.277,-13.542,-7.911)
C3': (-0.549,-13.034,-6.825)
C1': (-0.783,-14.408,-4.913)
O4': (-2.052,-14.012,-5.405)
C5': (-3.072,-12.496,-6.999)
P: (-4.767,-14.034,-8.233)
O2: (1.138,-15.888,-3.675)
C4': (-1.869,-12.777,-6.124)
C2': (0.255,-13.560,-5.640)
O2': (0.696,-12.527,-4.786)
N1: (-0.591,-15.858,-5.149)
N3: (0.611,-17.852,-4.670)
N4: (0.039,-19.808,-5.699)
C6: (-1.394,-16.528,-6.031)
C5: (-1.225,-17.838,-6.245)
O3': (0.010,-11.834,-7.353)
Image (generated by PyMOL):
PyMOL image
show in jmol