Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1029:A901
Extra
PDB:
ATOM 1 O3' C A1028 37.699 100.311 95.972 1.00 32.37 O
ATOM 2 P A A1029 37.475 100.714 94.442 1.00 33.46 P
ATOM 3 OP1 A A1029 36.934 102.084 94.400 1.00 33.65 O
ATOM 4 OP2 A A1029 36.711 99.615 93.811 1.00 34.16 O
ATOM 5 O5' A A1029 38.937 100.666 93.798 1.00 31.48 O
ATOM 6 C5' A A1029 39.926 101.699 94.001 1.00 28.86 C
ATOM 7 C4' A A1029 41.170 101.341 93.238 1.00 29.14 C
ATOM 8 O4' A A1029 41.581 100.000 93.595 1.00 31.04 O
ATOM 9 C3' A A1029 40.911 101.273 91.754 1.00 29.40 C
ATOM 10 O3' A A1029 41.096 102.574 91.255 1.00 30.52 O
ATOM 11 C2' A A1029 41.934 100.263 91.262 1.00 29.90 C
ATOM 12 O2' A A1029 43.218 100.816 91.088 1.00 29.07 O
ATOM 13 C1' A A1029 41.952 99.281 92.432 1.00 30.65 C
ATOM 14 N9 A A1029 41.045 98.139 92.295 1.00 31.00 N
ATOM 15 C8 A A1029 39.708 98.027 92.614 1.00 31.58 C
ATOM 16 N7 A A1029 39.227 96.820 92.435 1.00 32.99 N
ATOM 17 C5 A A1029 40.312 96.101 91.949 1.00 32.26 C
ATOM 18 C6 A A1029 40.470 94.759 91.573 1.00 33.45 C
ATOM 19 N6 A A1029 39.496 93.848 91.647 1.00 33.66 N
ATOM 20 N1 A A1029 41.683 94.375 91.118 1.00 32.41 N
ATOM 21 C2 A A1029 42.658 95.277 91.054 1.00 30.21 C
ATOM 22 N3 A A1029 42.637 96.556 91.384 1.00 30.32 N
ATOM 23 C4 A A1029 41.425 96.908 91.835 1.00 30.75 C
ATOM 24 P G A1030 40.440 102.994 89.867 1.00 30.33 P
ATOM 25 OP1 G A1030 41.240 102.382 88.802 1.00 27.99 O
ATOM 26 OP2 G A1030 40.204 104.457 89.880 1.00 29.55 O
ATOM 27 O5' G A1030 39.032 102.281 89.881 1.00 31.78 O
TER
ATOM 1 O3' A B 900 46.781 89.194 85.504 1.00 33.33 O
ATOM 2 P A B 901 47.399 89.060 86.979 1.00 34.80 P
ATOM 3 OP1 A B 901 47.962 87.696 87.004 1.00 35.03 O
ATOM 4 OP2 A B 901 46.379 89.453 87.993 1.00 33.63 O
ATOM 5 O5' A B 901 48.553 90.152 86.949 1.00 33.93 O
ATOM 6 C5' A B 901 48.996 90.819 88.137 1.00 33.84 C
ATOM 7 C4' A B 901 49.543 92.182 87.780 1.00 33.39 C
ATOM 8 O4' A B 901 48.438 93.045 87.481 1.00 31.30 O
ATOM 9 C3' A B 901 50.230 92.915 88.914 1.00 33.33 C
ATOM 10 O3' A B 901 51.569 92.492 89.022 1.00 33.43 O
ATOM 11 C2' A B 901 50.113 94.379 88.538 1.00 32.21 C
ATOM 12 O2' A B 901 51.192 94.882 87.788 1.00 32.11 O
ATOM 13 C1' A B 901 48.814 94.380 87.735 1.00 30.97 C
ATOM 14 N9 A B 901 47.738 95.029 88.460 1.00 30.10 N
ATOM 15 C8 A B 901 46.639 94.472 89.040 1.00 30.50 C
ATOM 16 N7 A B 901 45.868 95.334 89.639 1.00 28.42 N
ATOM 17 C5 A B 901 46.506 96.542 89.441 1.00 27.00 C
ATOM 18 C6 A B 901 46.187 97.833 89.825 1.00 26.74 C
ATOM 19 N6 A B 901 45.110 98.143 90.544 1.00 25.91 N
ATOM 20 N1 A B 901 47.018 98.820 89.444 1.00 26.57 N
ATOM 21 C2 A B 901 48.098 98.506 88.726 1.00 25.97 C
ATOM 22 N3 A B 901 48.507 97.325 88.312 1.00 26.63 N
ATOM 23 C4 A B 901 47.653 96.372 88.706 1.00 28.26 C
ATOM 24 P C B 902 51.986 91.602 90.271 1.00 32.85 P
ATOM 25 OP1 C B 902 50.970 91.875 91.308 1.00 31.71 O
ATOM 26 OP2 C B 902 53.428 91.850 90.552 1.00 31.41 O
ATOM 27 O5' C B 902 51.803 90.109 89.760 1.00 31.39 O
TER
ATOM 2 P A A1029 37.475 100.714 94.442 1.00 33.46 P
ATOM 3 OP1 A A1029 36.934 102.084 94.400 1.00 33.65 O
ATOM 4 OP2 A A1029 36.711 99.615 93.811 1.00 34.16 O
ATOM 5 O5' A A1029 38.937 100.666 93.798 1.00 31.48 O
ATOM 6 C5' A A1029 39.926 101.699 94.001 1.00 28.86 C
ATOM 7 C4' A A1029 41.170 101.341 93.238 1.00 29.14 C
ATOM 8 O4' A A1029 41.581 100.000 93.595 1.00 31.04 O
ATOM 9 C3' A A1029 40.911 101.273 91.754 1.00 29.40 C
ATOM 10 O3' A A1029 41.096 102.574 91.255 1.00 30.52 O
ATOM 11 C2' A A1029 41.934 100.263 91.262 1.00 29.90 C
ATOM 12 O2' A A1029 43.218 100.816 91.088 1.00 29.07 O
ATOM 13 C1' A A1029 41.952 99.281 92.432 1.00 30.65 C
ATOM 14 N9 A A1029 41.045 98.139 92.295 1.00 31.00 N
ATOM 15 C8 A A1029 39.708 98.027 92.614 1.00 31.58 C
ATOM 16 N7 A A1029 39.227 96.820 92.435 1.00 32.99 N
ATOM 17 C5 A A1029 40.312 96.101 91.949 1.00 32.26 C
ATOM 18 C6 A A1029 40.470 94.759 91.573 1.00 33.45 C
ATOM 19 N6 A A1029 39.496 93.848 91.647 1.00 33.66 N
ATOM 20 N1 A A1029 41.683 94.375 91.118 1.00 32.41 N
ATOM 21 C2 A A1029 42.658 95.277 91.054 1.00 30.21 C
ATOM 22 N3 A A1029 42.637 96.556 91.384 1.00 30.32 N
ATOM 23 C4 A A1029 41.425 96.908 91.835 1.00 30.75 C
ATOM 24 P G A1030 40.440 102.994 89.867 1.00 30.33 P
ATOM 25 OP1 G A1030 41.240 102.382 88.802 1.00 27.99 O
ATOM 26 OP2 G A1030 40.204 104.457 89.880 1.00 29.55 O
ATOM 27 O5' G A1030 39.032 102.281 89.881 1.00 31.78 O
TER
ATOM 1 O3' A B 900 46.781 89.194 85.504 1.00 33.33 O
ATOM 2 P A B 901 47.399 89.060 86.979 1.00 34.80 P
ATOM 3 OP1 A B 901 47.962 87.696 87.004 1.00 35.03 O
ATOM 4 OP2 A B 901 46.379 89.453 87.993 1.00 33.63 O
ATOM 5 O5' A B 901 48.553 90.152 86.949 1.00 33.93 O
ATOM 6 C5' A B 901 48.996 90.819 88.137 1.00 33.84 C
ATOM 7 C4' A B 901 49.543 92.182 87.780 1.00 33.39 C
ATOM 8 O4' A B 901 48.438 93.045 87.481 1.00 31.30 O
ATOM 9 C3' A B 901 50.230 92.915 88.914 1.00 33.33 C
ATOM 10 O3' A B 901 51.569 92.492 89.022 1.00 33.43 O
ATOM 11 C2' A B 901 50.113 94.379 88.538 1.00 32.21 C
ATOM 12 O2' A B 901 51.192 94.882 87.788 1.00 32.11 O
ATOM 13 C1' A B 901 48.814 94.380 87.735 1.00 30.97 C
ATOM 14 N9 A B 901 47.738 95.029 88.460 1.00 30.10 N
ATOM 15 C8 A B 901 46.639 94.472 89.040 1.00 30.50 C
ATOM 16 N7 A B 901 45.868 95.334 89.639 1.00 28.42 N
ATOM 17 C5 A B 901 46.506 96.542 89.441 1.00 27.00 C
ATOM 18 C6 A B 901 46.187 97.833 89.825 1.00 26.74 C
ATOM 19 N6 A B 901 45.110 98.143 90.544 1.00 25.91 N
ATOM 20 N1 A B 901 47.018 98.820 89.444 1.00 26.57 N
ATOM 21 C2 A B 901 48.098 98.506 88.726 1.00 25.97 C
ATOM 22 N3 A B 901 48.507 97.325 88.312 1.00 26.63 N
ATOM 23 C4 A B 901 47.653 96.372 88.706 1.00 28.26 C
ATOM 24 P C B 902 51.986 91.602 90.271 1.00 32.85 P
ATOM 25 OP1 C B 902 50.970 91.875 91.308 1.00 31.71 O
ATOM 26 OP2 C B 902 53.428 91.850 90.552 1.00 31.41 O
ATOM 27 O5' C B 902 51.803 90.109 89.760 1.00 31.39 O
TER
Atoms:
OP1: (36.934,102.084,94.400)
OP2: (36.711,99.615,93.811)
C3': (40.911,101.273,91.754)
C1': (41.952,99.281,92.432)
C5': (39.926,101.699,94.001)
O4': (41.581,100.000,93.595)
C8: (39.708,98.027,92.614)
O2': (43.218,100.816,91.088)
C6: (40.470,94.759,91.573)
C5: (40.312,96.101,91.949)
C4: (41.425,96.908,91.835)
P: (37.475,100.714,94.442)
C4': (41.170,101.341,93.238)
C2': (41.934,100.263,91.262)
C2: (42.658,95.277,91.054)
N1: (41.683,94.375,91.118)
N3: (42.637,96.556,91.384)
N6: (39.496,93.848,91.647)
N7: (39.227,96.820,92.435)
N9: (41.045,98.139,92.295)
O5': (38.937,100.666,93.798)
O3': (41.096,102.574,91.255)
OP2: (36.711,99.615,93.811)
C3': (40.911,101.273,91.754)
C1': (41.952,99.281,92.432)
C5': (39.926,101.699,94.001)
O4': (41.581,100.000,93.595)
C8: (39.708,98.027,92.614)
O2': (43.218,100.816,91.088)
C6: (40.470,94.759,91.573)
C5: (40.312,96.101,91.949)
C4: (41.425,96.908,91.835)
P: (37.475,100.714,94.442)
C4': (41.170,101.341,93.238)
C2': (41.934,100.263,91.262)
C2: (42.658,95.277,91.054)
N1: (41.683,94.375,91.118)
N3: (42.637,96.556,91.384)
N6: (39.496,93.848,91.647)
N7: (39.227,96.820,92.435)
N9: (41.045,98.139,92.295)
O5': (38.937,100.666,93.798)
O3': (41.096,102.574,91.255)
OP1: (47.962,87.696,87.004)
OP2: (46.379,89.453,87.993)
C3': (50.230,92.915,88.914)
C1': (48.814,94.380,87.735)
C5': (48.996,90.819,88.137)
O4': (48.438,93.045,87.481)
C8: (46.639,94.472,89.040)
O2': (51.192,94.882,87.788)
C6: (46.187,97.833,89.825)
C5: (46.506,96.542,89.441)
C4: (47.653,96.372,88.706)
P: (47.399,89.060,86.979)
C4': (49.543,92.182,87.780)
C2': (50.113,94.379,88.538)
C2: (48.098,98.506,88.726)
N1: (47.018,98.820,89.444)
N3: (48.507,97.325,88.312)
N6: (45.110,98.143,90.544)
N7: (45.868,95.334,89.639)
N9: (47.738,95.029,88.460)
O5': (48.553,90.152,86.949)
O3': (51.569,92.492,89.022)
OP2: (46.379,89.453,87.993)
C3': (50.230,92.915,88.914)
C1': (48.814,94.380,87.735)
C5': (48.996,90.819,88.137)
O4': (48.438,93.045,87.481)
C8: (46.639,94.472,89.040)
O2': (51.192,94.882,87.788)
C6: (46.187,97.833,89.825)
C5: (46.506,96.542,89.441)
C4: (47.653,96.372,88.706)
P: (47.399,89.060,86.979)
C4': (49.543,92.182,87.780)
C2': (50.113,94.379,88.538)
C2: (48.098,98.506,88.726)
N1: (47.018,98.820,89.444)
N3: (48.507,97.325,88.312)
N6: (45.110,98.143,90.544)
N7: (45.868,95.334,89.639)
N9: (47.738,95.029,88.460)
O5': (48.553,90.152,86.949)
O3': (51.569,92.492,89.022)
Image (generated by PyMOL):