ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1L8V:B10:B104

Extra

PDB:
ATOM 1 O3' G A 9 -45.297 -48.920 79.064 1.00109.83 O
ATOM 2 P A A 10 -46.592 -48.105 79.563 1.00112.85 P
ATOM 3 OP1 A A 10 -46.615 -48.177 81.043 1.00112.44 O
ATOM 4 OP2 A A 10 -47.752 -48.573 78.784 1.00111.98 O
ATOM 5 O5' A A 10 -46.270 -46.608 79.134 1.00115.12 O
ATOM 6 C5' A A 10 -45.117 -45.956 79.649 1.00119.85 C
ATOM 7 C4' A A 10 -44.800 -44.739 78.832 1.00123.14 C
ATOM 8 O4' A A 10 -44.444 -45.140 77.484 1.00124.27 O
ATOM 9 C3' A A 10 -45.980 -43.810 78.632 1.00125.25 C
ATOM 10 O3' A A 10 -46.085 -42.925 79.739 1.00128.65 O
ATOM 11 C2' A A 10 -45.600 -43.064 77.361 1.00125.27 C
ATOM 12 O2' A A 10 -44.682 -42.017 77.597 1.00126.01 O
ATOM 13 C1' A A 10 -44.902 -44.164 76.566 1.00125.40 C
ATOM 14 N9 A A 10 -45.764 -44.808 75.582 1.00125.68 N
ATOM 15 C8 A A 10 -46.496 -45.964 75.688 1.00125.25 C
ATOM 16 N7 A A 10 -47.146 -46.279 74.593 1.00123.83 N
ATOM 17 C5 A A 10 -46.825 -45.259 73.711 1.00124.77 C
ATOM 18 C6 A A 10 -47.189 -45.010 72.375 1.00124.86 C
ATOM 19 N6 A A 10 -47.984 -45.803 71.664 1.00124.27 N
ATOM 20 N1 A A 10 -46.699 -43.898 71.786 1.00126.00 N
ATOM 21 C2 A A 10 -45.891 -43.094 72.500 1.00127.09 C
ATOM 22 N3 A A 10 -45.473 -43.224 73.760 1.00126.89 N
ATOM 23 C4 A A 10 -45.982 -44.341 74.312 1.00125.74 C
ATOM 24 P A A 11 -47.318 -41.893 79.828 1.00130.43 P
ATOM 25 OP1 A A 11 -47.798 -41.922 81.236 1.00129.25 O
ATOM 26 OP2 A A 11 -48.258 -42.173 78.719 1.00129.04 O
ATOM 27 O5' A A 11 -46.646 -40.484 79.543 1.00134.13 O
TER

ATOM 1 O3' A B 103 -47.503 -39.976 66.696 1.00155.46 O
ATOM 2 P A B 104 -45.991 -40.460 66.576 1.00150.92 P
ATOM 3 OP1 A B 104 -45.624 -40.421 65.139 1.00151.09 O
ATOM 4 OP2 A B 104 -45.860 -41.733 67.339 1.00150.53 O
ATOM 5 O5' A B 104 -45.194 -39.317 67.352 1.00147.89 O
ATOM 6 C5' A B 104 -45.362 -37.949 66.997 1.00142.80 C
ATOM 7 C4' A B 104 -44.539 -37.075 67.900 1.00139.03 C
ATOM 8 O4' A B 104 -45.119 -37.078 69.230 1.00138.39 O
ATOM 9 C3' A B 104 -43.122 -37.572 68.118 1.00137.36 C
ATOM 10 O3' A B 104 -42.257 -37.187 67.063 1.00133.89 O
ATOM 11 C2' A B 104 -42.751 -36.925 69.444 1.00137.81 C
ATOM 12 O2' A B 104 -42.352 -35.575 69.298 1.00137.83 O
ATOM 13 C1' A B 104 -44.080 -37.012 70.198 1.00138.06 C
ATOM 14 N9 A B 104 -44.177 -38.189 71.062 1.00138.19 N
ATOM 15 C8 A B 104 -44.878 -39.352 70.845 1.00137.96 C
ATOM 16 N7 A B 104 -44.795 -40.214 71.829 1.00137.25 N
ATOM 17 C5 A B 104 -43.979 -39.582 72.754 1.00137.74 C
ATOM 18 C6 A B 104 -43.510 -39.972 74.018 1.00138.32 C
ATOM 19 N6 A B 104 -43.818 -41.132 74.593 1.00137.82 N
ATOM 20 N1 A B 104 -42.705 -39.113 74.682 1.00139.76 N
ATOM 21 C2 A B 104 -42.402 -37.937 74.101 1.00140.15 C
ATOM 22 N3 A B 104 -42.786 -37.454 72.919 1.00138.96 N
ATOM 23 C4 A B 104 -43.581 -38.337 72.289 1.00138.26 C
ATOM 24 P C B 105 -41.180 -38.239 66.511 1.00130.45 P
ATOM 25 OP1 C B 105 -40.177 -37.480 65.714 1.00130.85 O
ATOM 26 OP2 C B 105 -41.946 -39.336 65.871 1.00129.44 O
ATOM 27 O5' C B 105 -40.477 -38.797 67.839 1.00127.91 O
TER

Atoms:
OP1: (-46.615,-48.177,81.043)
OP2: (-47.752,-48.573,78.784)
C3': (-45.980,-43.810,78.632)
C1': (-44.902,-44.164,76.566)
C5': (-45.117,-45.956,79.649)
O4': (-44.444,-45.140,77.484)
C8: (-46.496,-45.964,75.688)
O2': (-44.682,-42.017,77.597)
C6: (-47.189,-45.010,72.375)
C5: (-46.825,-45.259,73.711)
C4: (-45.982,-44.341,74.312)
P: (-46.592,-48.105,79.563)
C4': (-44.800,-44.739,78.832)
C2': (-45.600,-43.064,77.361)
C2: (-45.891,-43.094,72.500)
N1: (-46.699,-43.898,71.786)
N3: (-45.473,-43.224,73.760)
N6: (-47.984,-45.803,71.664)
N7: (-47.146,-46.279,74.593)
N9: (-45.764,-44.808,75.582)
O5': (-46.270,-46.608,79.134)
O3': (-46.085,-42.925,79.739)
OP1: (-45.624,-40.421,65.139)
OP2: (-45.860,-41.733,67.339)
C3': (-43.122,-37.572,68.118)
C1': (-44.080,-37.012,70.198)
C5': (-45.362,-37.949,66.997)
O4': (-45.119,-37.078,69.230)
C8: (-44.878,-39.352,70.845)
O2': (-42.352,-35.575,69.298)
C6: (-43.510,-39.972,74.018)
C5: (-43.979,-39.582,72.754)
C4: (-43.581,-38.337,72.289)
P: (-45.991,-40.460,66.576)
C4': (-44.539,-37.075,67.900)
C2': (-42.751,-36.925,69.444)
C2: (-42.402,-37.937,74.101)
N1: (-42.705,-39.113,74.682)
N3: (-42.786,-37.454,72.919)
N6: (-43.818,-41.132,74.593)
N7: (-44.795,-40.214,71.829)
N9: (-44.177,-38.189,71.062)
O5': (-45.194,-39.317,67.352)
O3': (-42.257,-37.187,67.063)
Image (generated by PyMOL):
PyMOL image
show in jmol