Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:D11:E8
Extra
PDB:
ATOM 1 O3' C A 10 2.808 18.524 123.454 1.00 85.19 O
ATOM 2 P A A 11 4.394 18.533 123.726 1.00 78.35 P
ATOM 3 OP1 A A 11 4.896 17.155 123.510 1.00 77.02 O
ATOM 4 OP2 A A 11 4.585 19.184 125.051 1.00 68.22 O
ATOM 5 O5' A A 11 4.997 19.456 122.565 1.00 65.87 O
ATOM 6 C5' A A 11 4.649 19.206 121.203 1.00 77.91 C
ATOM 7 C4' A A 11 5.476 20.040 120.239 1.00 74.43 C
ATOM 8 O4' A A 11 5.069 21.433 120.272 1.00 73.16 O
ATOM 9 C3' A A 11 6.976 20.031 120.495 1.00 76.00 C
ATOM 10 O3' A A 11 7.589 20.374 119.258 1.00 94.98 O
ATOM 11 C2' A A 11 7.227 21.299 121.306 1.00 88.66 C
ATOM 12 O2' A A 11 8.490 21.871 121.028 1.00 96.35 O
ATOM 13 C1' A A 11 6.086 22.216 120.858 1.00 89.20 C
ATOM 14 N9 A A 11 5.522 23.089 121.891 1.00 88.70 N
ATOM 15 C8 A A 11 4.968 22.757 123.102 1.00 85.99 C
ATOM 16 N7 A A 11 4.602 23.794 123.817 1.00 86.11 N
ATOM 17 C5 A A 11 4.925 24.880 123.018 1.00 85.12 C
ATOM 18 C6 A A 11 4.786 26.266 123.205 1.00 89.74 C
ATOM 19 N6 A A 11 4.265 26.821 124.303 1.00 94.57 N
ATOM 20 N1 A A 11 5.208 27.078 122.211 1.00 93.31 N
ATOM 21 C2 A A 11 5.731 26.525 121.109 1.00 90.50 C
ATOM 22 N3 A A 11 5.914 25.242 120.820 1.00 87.69 N
ATOM 23 C4 A A 11 5.485 24.462 121.828 1.00 85.80 C
TER
ATOM 1 O3' G B 7 6.896 33.028 121.017 1.00114.62 O
ATOM 2 P A B 8 5.545 32.745 120.189 1.00 95.80 P
ATOM 3 OP1 A B 8 4.675 33.941 120.303 1.00 89.24 O
ATOM 4 OP2 A B 8 5.021 31.419 120.609 1.00 85.54 O
ATOM 5 O5' A B 8 6.050 32.643 118.679 1.00 86.99 O
ATOM 6 C5' A B 8 6.692 33.750 118.036 1.00 83.65 C
ATOM 7 C4' A B 8 7.162 33.347 116.655 1.00 77.10 C
ATOM 8 O4' A B 8 8.244 32.388 116.789 1.00 80.14 O
ATOM 9 C3' A B 8 6.117 32.636 115.803 1.00 89.17 C
ATOM 10 O3' A B 8 5.310 33.558 115.078 1.00 73.86 O
ATOM 11 C2' A B 8 6.973 31.768 114.890 1.00 81.36 C
ATOM 12 O2' A B 8 7.532 32.480 113.807 1.00 75.99 O
ATOM 13 C1' A B 8 8.082 31.335 115.849 1.00 83.39 C
ATOM 14 N9 A B 8 7.740 30.117 116.586 1.00 81.75 N
ATOM 15 C8 A B 8 7.276 30.021 117.876 1.00 83.51 C
ATOM 16 N7 A B 8 7.040 28.793 118.265 1.00 77.85 N
ATOM 17 C5 A B 8 7.373 28.025 117.160 1.00 79.46 C
ATOM 18 C6 A B 8 7.345 26.639 116.931 1.00 77.15 C
ATOM 19 N6 A B 8 6.946 25.745 117.837 1.00 77.61 N
ATOM 20 N1 A B 8 7.744 26.198 115.723 1.00 75.24 N
ATOM 21 C2 A B 8 8.142 27.095 114.810 1.00 80.76 C
ATOM 22 N3 A B 8 8.212 28.419 114.903 1.00 81.17 N
ATOM 23 C4 A B 8 7.810 28.827 116.119 1.00 80.80 C
ATOM 24 P A B 9 3.712 33.375 115.057 1.00 93.08 P
ATOM 25 OP1 A B 9 3.148 34.632 114.500 1.00100.34 O
ATOM 26 OP2 A B 9 3.259 32.889 116.390 1.00 83.59 O
ATOM 27 O5' A B 9 3.463 32.204 114.010 1.00 67.26 O
TER
ATOM 2 P A A 11 4.394 18.533 123.726 1.00 78.35 P
ATOM 3 OP1 A A 11 4.896 17.155 123.510 1.00 77.02 O
ATOM 4 OP2 A A 11 4.585 19.184 125.051 1.00 68.22 O
ATOM 5 O5' A A 11 4.997 19.456 122.565 1.00 65.87 O
ATOM 6 C5' A A 11 4.649 19.206 121.203 1.00 77.91 C
ATOM 7 C4' A A 11 5.476 20.040 120.239 1.00 74.43 C
ATOM 8 O4' A A 11 5.069 21.433 120.272 1.00 73.16 O
ATOM 9 C3' A A 11 6.976 20.031 120.495 1.00 76.00 C
ATOM 10 O3' A A 11 7.589 20.374 119.258 1.00 94.98 O
ATOM 11 C2' A A 11 7.227 21.299 121.306 1.00 88.66 C
ATOM 12 O2' A A 11 8.490 21.871 121.028 1.00 96.35 O
ATOM 13 C1' A A 11 6.086 22.216 120.858 1.00 89.20 C
ATOM 14 N9 A A 11 5.522 23.089 121.891 1.00 88.70 N
ATOM 15 C8 A A 11 4.968 22.757 123.102 1.00 85.99 C
ATOM 16 N7 A A 11 4.602 23.794 123.817 1.00 86.11 N
ATOM 17 C5 A A 11 4.925 24.880 123.018 1.00 85.12 C
ATOM 18 C6 A A 11 4.786 26.266 123.205 1.00 89.74 C
ATOM 19 N6 A A 11 4.265 26.821 124.303 1.00 94.57 N
ATOM 20 N1 A A 11 5.208 27.078 122.211 1.00 93.31 N
ATOM 21 C2 A A 11 5.731 26.525 121.109 1.00 90.50 C
ATOM 22 N3 A A 11 5.914 25.242 120.820 1.00 87.69 N
ATOM 23 C4 A A 11 5.485 24.462 121.828 1.00 85.80 C
TER
ATOM 1 O3' G B 7 6.896 33.028 121.017 1.00114.62 O
ATOM 2 P A B 8 5.545 32.745 120.189 1.00 95.80 P
ATOM 3 OP1 A B 8 4.675 33.941 120.303 1.00 89.24 O
ATOM 4 OP2 A B 8 5.021 31.419 120.609 1.00 85.54 O
ATOM 5 O5' A B 8 6.050 32.643 118.679 1.00 86.99 O
ATOM 6 C5' A B 8 6.692 33.750 118.036 1.00 83.65 C
ATOM 7 C4' A B 8 7.162 33.347 116.655 1.00 77.10 C
ATOM 8 O4' A B 8 8.244 32.388 116.789 1.00 80.14 O
ATOM 9 C3' A B 8 6.117 32.636 115.803 1.00 89.17 C
ATOM 10 O3' A B 8 5.310 33.558 115.078 1.00 73.86 O
ATOM 11 C2' A B 8 6.973 31.768 114.890 1.00 81.36 C
ATOM 12 O2' A B 8 7.532 32.480 113.807 1.00 75.99 O
ATOM 13 C1' A B 8 8.082 31.335 115.849 1.00 83.39 C
ATOM 14 N9 A B 8 7.740 30.117 116.586 1.00 81.75 N
ATOM 15 C8 A B 8 7.276 30.021 117.876 1.00 83.51 C
ATOM 16 N7 A B 8 7.040 28.793 118.265 1.00 77.85 N
ATOM 17 C5 A B 8 7.373 28.025 117.160 1.00 79.46 C
ATOM 18 C6 A B 8 7.345 26.639 116.931 1.00 77.15 C
ATOM 19 N6 A B 8 6.946 25.745 117.837 1.00 77.61 N
ATOM 20 N1 A B 8 7.744 26.198 115.723 1.00 75.24 N
ATOM 21 C2 A B 8 8.142 27.095 114.810 1.00 80.76 C
ATOM 22 N3 A B 8 8.212 28.419 114.903 1.00 81.17 N
ATOM 23 C4 A B 8 7.810 28.827 116.119 1.00 80.80 C
ATOM 24 P A B 9 3.712 33.375 115.057 1.00 93.08 P
ATOM 25 OP1 A B 9 3.148 34.632 114.500 1.00100.34 O
ATOM 26 OP2 A B 9 3.259 32.889 116.390 1.00 83.59 O
ATOM 27 O5' A B 9 3.463 32.204 114.010 1.00 67.26 O
TER
Atoms:
OP1: (4.896,17.155,123.510)
OP2: (4.585,19.184,125.051)
C3': (6.976,20.031,120.495)
C1': (6.086,22.216,120.858)
C5': (4.649,19.206,121.203)
O4': (5.069,21.433,120.272)
C8: (4.968,22.757,123.102)
O2': (8.490,21.871,121.028)
C6: (4.786,26.266,123.205)
C5: (4.925,24.880,123.018)
C4: (5.485,24.462,121.828)
P: (4.394,18.533,123.726)
C4': (5.476,20.040,120.239)
C2': (7.227,21.299,121.306)
C2: (5.731,26.525,121.109)
N1: (5.208,27.078,122.211)
N3: (5.914,25.242,120.820)
N6: (4.265,26.821,124.303)
N7: (4.602,23.794,123.817)
N9: (5.522,23.089,121.891)
O5': (4.997,19.456,122.565)
O3': (7.589,20.374,119.258)
OP2: (4.585,19.184,125.051)
C3': (6.976,20.031,120.495)
C1': (6.086,22.216,120.858)
C5': (4.649,19.206,121.203)
O4': (5.069,21.433,120.272)
C8: (4.968,22.757,123.102)
O2': (8.490,21.871,121.028)
C6: (4.786,26.266,123.205)
C5: (4.925,24.880,123.018)
C4: (5.485,24.462,121.828)
P: (4.394,18.533,123.726)
C4': (5.476,20.040,120.239)
C2': (7.227,21.299,121.306)
C2: (5.731,26.525,121.109)
N1: (5.208,27.078,122.211)
N3: (5.914,25.242,120.820)
N6: (4.265,26.821,124.303)
N7: (4.602,23.794,123.817)
N9: (5.522,23.089,121.891)
O5': (4.997,19.456,122.565)
O3': (7.589,20.374,119.258)
OP1: (4.675,33.941,120.303)
OP2: (5.021,31.419,120.609)
C3': (6.117,32.636,115.803)
C1': (8.082,31.335,115.849)
C5': (6.692,33.750,118.036)
O4': (8.244,32.388,116.789)
C8: (7.276,30.021,117.876)
O2': (7.532,32.480,113.807)
C6: (7.345,26.639,116.931)
C5: (7.373,28.025,117.160)
C4: (7.810,28.827,116.119)
P: (5.545,32.745,120.189)
C4': (7.162,33.347,116.655)
C2': (6.973,31.768,114.890)
C2: (8.142,27.095,114.810)
N1: (7.744,26.198,115.723)
N3: (8.212,28.419,114.903)
N6: (6.946,25.745,117.837)
N7: (7.040,28.793,118.265)
N9: (7.740,30.117,116.586)
O5': (6.050,32.643,118.679)
O3': (5.310,33.558,115.078)
OP2: (5.021,31.419,120.609)
C3': (6.117,32.636,115.803)
C1': (8.082,31.335,115.849)
C5': (6.692,33.750,118.036)
O4': (8.244,32.388,116.789)
C8: (7.276,30.021,117.876)
O2': (7.532,32.480,113.807)
C6: (7.345,26.639,116.931)
C5: (7.373,28.025,117.160)
C4: (7.810,28.827,116.119)
P: (5.545,32.745,120.189)
C4': (7.162,33.347,116.655)
C2': (6.973,31.768,114.890)
C2: (8.142,27.095,114.810)
N1: (7.744,26.198,115.723)
N3: (8.212,28.419,114.903)
N6: (6.946,25.745,117.837)
N7: (7.040,28.793,118.265)
N9: (7.740,30.117,116.586)
O5': (6.050,32.643,118.679)
O3': (5.310,33.558,115.078)
Image (generated by PyMOL):