ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01919:01955

Extra

PDB:
ATOM 1 O3' U A1918 121.426 113.743 103.979 1.00 64.54 O
ATOM 2 P A A1919 120.942 114.926 104.951 1.00 64.58 P
ATOM 3 OP1 A A1919 121.317 114.554 106.331 1.00 66.68 O
ATOM 4 OP2 A A1919 119.523 115.229 104.643 1.00 65.13 O
ATOM 5 O5' A A1919 121.847 116.161 104.517 1.00 63.12 O
ATOM 6 C5' A A1919 121.864 116.601 103.157 1.00 62.63 C
ATOM 7 C4' A A1919 122.068 118.089 103.085 1.00 63.73 C
ATOM 8 O4' A A1919 121.718 118.537 101.743 1.00 65.52 O
ATOM 9 C3' A A1919 121.196 118.905 104.026 1.00 63.52 C
ATOM 10 O3' A A1919 121.851 119.109 105.277 1.00 62.92 O
ATOM 11 C2' A A1919 120.920 120.168 103.222 1.00 64.77 C
ATOM 12 O2' A A1919 122.012 121.063 103.253 1.00 63.64 O
ATOM 13 C1' A A1919 120.762 119.579 101.819 1.00 65.89 C
ATOM 14 N9 A A1919 119.440 118.994 101.557 1.00 67.40 N
ATOM 15 C8 A A1919 118.974 117.760 101.953 1.00 67.40 C
ATOM 16 N7 A A1919 117.753 117.501 101.560 1.00 67.99 N
ATOM 17 C5 A A1919 117.381 118.640 100.856 1.00 68.77 C
ATOM 18 C6 A A1919 116.197 118.991 100.180 1.00 68.14 C
ATOM 19 N6 A A1919 115.126 118.199 100.097 1.00 66.68 N
ATOM 20 N1 A A1919 116.151 120.199 99.583 1.00 68.38 N
ATOM 21 C2 A A1919 117.222 120.996 99.664 1.00 68.26 C
ATOM 22 N3 A A1919 118.390 120.782 100.265 1.00 69.12 N
ATOM 23 C4 A A1919 118.409 119.570 100.849 1.00 68.61 C
ATOM 24 P G A1920 121.322 120.242 106.289 1.00 63.56 P
ATOM 25 OP1 G A1920 121.854 121.547 105.823 1.00 63.40 O
ATOM 26 OP2 G A1920 121.553 119.804 107.688 1.00 64.45 O
ATOM 27 O5' G A1920 119.755 120.261 106.063 1.00 63.32 O
TER

ATOM 1 O3' U B1954 106.152 116.423 99.610 1.00 56.10 O
ATOM 2 P G B1955 106.724 115.795 98.260 1.00 56.52 P
ATOM 3 OP1 G B1955 106.006 116.416 97.117 1.00 56.57 O
ATOM 4 OP2 G B1955 106.751 114.312 98.395 1.00 55.70 O
ATOM 5 O5' G B1955 108.220 116.328 98.255 1.00 58.05 O
ATOM 6 C5' G B1955 108.498 117.734 98.139 1.00 57.34 C
ATOM 7 C4' G B1955 109.980 117.980 98.247 1.00 55.91 C
ATOM 8 O4' G B1955 110.395 117.852 99.631 1.00 55.36 O
ATOM 9 C3' G B1955 110.863 116.992 97.503 1.00 54.20 C
ATOM 10 O3' G B1955 110.961 117.263 96.109 1.00 53.03 O
ATOM 11 C2' G B1955 112.178 117.154 98.241 1.00 54.82 C
ATOM 12 O2' G B1955 112.837 118.350 97.878 1.00 53.78 O
ATOM 13 C1' G B1955 111.683 117.261 99.685 1.00 56.20 C
ATOM 14 N9 G B1955 111.545 115.943 100.294 1.00 58.52 N
ATOM 15 C8 G B1955 110.410 115.173 100.335 1.00 59.56 C
ATOM 16 N7 G B1955 110.595 114.015 100.903 1.00 61.50 N
ATOM 17 C5 G B1955 111.934 114.020 101.266 1.00 61.72 C
ATOM 18 C6 G B1955 112.717 113.021 101.907 1.00 62.66 C
ATOM 19 O6 G B1955 112.373 111.892 102.283 1.00 63.28 O
ATOM 20 N1 G B1955 114.027 113.442 102.093 1.00 62.66 N
ATOM 21 C2 G B1955 114.526 114.659 101.709 1.00 62.48 C
ATOM 22 N2 G B1955 115.822 114.873 101.974 1.00 64.10 N
ATOM 23 N3 G B1955 113.810 115.597 101.107 1.00 61.63 N
ATOM 24 C4 G B1955 112.532 115.210 100.915 1.00 60.56 C
ATOM 25 P A B1956 111.170 116.045 95.074 1.00 53.83 P
ATOM 26 OP1 A B1956 110.596 116.471 93.767 1.00 52.66 O
ATOM 27 OP2 A B1956 110.689 114.792 95.706 1.00 53.47 O
ATOM 28 O5' A B1956 112.757 115.931 94.935 1.00 52.84 O
TER

Atoms:
OP1: (121.317,114.554,106.331)
OP2: (119.523,115.229,104.643)
C3': (121.196,118.905,104.026)
C1': (120.762,119.579,101.819)
C5': (121.864,116.601,103.157)
O4': (121.718,118.537,101.743)
C8: (118.974,117.760,101.953)
O2': (122.012,121.063,103.253)
C6: (116.197,118.991,100.180)
C5: (117.381,118.640,100.856)
C4: (118.409,119.570,100.849)
P: (120.942,114.926,104.951)
C4': (122.068,118.089,103.085)
C2': (120.920,120.168,103.222)
C2: (117.222,120.996,99.664)
N1: (116.151,120.199,99.583)
N3: (118.390,120.782,100.265)
N6: (115.126,118.199,100.097)
N7: (117.753,117.501,101.560)
N9: (119.440,118.994,101.557)
O5': (121.847,116.161,104.517)
O3': (121.851,119.109,105.277)
OP1: (106.006,116.416,97.117)
OP2: (106.751,114.312,98.395)
C3': (110.863,116.992,97.503)
C1': (111.683,117.261,99.685)
C5': (108.498,117.734,98.139)
O6: (112.373,111.892,102.283)
O4': (110.395,117.852,99.631)
C8: (110.410,115.173,100.335)
C2: (114.526,114.659,101.709)
C6: (112.717,113.021,101.907)
C5: (111.934,114.020,101.266)
C4: (112.532,115.210,100.915)
P: (106.724,115.795,98.260)
C4': (109.980,117.980,98.247)
C2': (112.178,117.154,98.241)
O2': (112.837,118.350,97.878)
N1: (114.027,113.442,102.093)
N2: (115.822,114.873,101.974)
N3: (113.810,115.597,101.107)
N7: (110.595,114.015,100.903)
N9: (111.545,115.943,100.294)
O5': (108.220,116.328,98.255)
O3': (110.961,117.263,96.109)
Image (generated by PyMOL):
PyMOL image
show in jmol