ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01029:0901

Extra

PDB:
ATOM 1 O3' C A1028 37.770 100.396 95.826 1.00 35.35 O
ATOM 2 P A A1029 37.497 100.786 94.303 1.00 35.65 P
ATOM 3 OP1 A A1029 37.023 102.190 94.312 1.00 34.79 O
ATOM 4 OP2 A A1029 36.643 99.735 93.715 1.00 34.46 O
ATOM 5 O5' A A1029 38.940 100.732 93.631 1.00 34.86 O
ATOM 6 C5' A A1029 39.919 101.768 93.879 1.00 34.56 C
ATOM 7 C4' A A1029 41.189 101.474 93.120 1.00 34.74 C
ATOM 8 O4' A A1029 41.699 100.182 93.528 1.00 35.94 O
ATOM 9 C3' A A1029 41.000 101.374 91.620 1.00 33.81 C
ATOM 10 O3' A A1029 41.179 102.655 91.058 1.00 35.44 O
ATOM 11 C2' A A1029 42.083 100.394 91.192 1.00 33.87 C
ATOM 12 O2' A A1029 43.357 100.970 91.034 1.00 33.14 O
ATOM 13 C1' A A1029 42.127 99.452 92.393 1.00 35.80 C
ATOM 14 N9 A A1029 41.250 98.295 92.261 1.00 38.01 N
ATOM 15 C8 A A1029 39.927 98.217 92.610 1.00 39.11 C
ATOM 16 N7 A A1029 39.395 97.046 92.386 1.00 41.47 N
ATOM 17 C5 A A1029 40.436 96.306 91.851 1.00 39.55 C
ATOM 18 C6 A A1029 40.508 95.000 91.404 1.00 40.80 C
ATOM 19 N6 A A1029 39.470 94.167 91.429 1.00 43.63 N
ATOM 20 N1 A A1029 41.690 94.562 90.923 1.00 40.62 N
ATOM 21 C2 A A1029 42.718 95.401 90.904 1.00 37.07 C
ATOM 22 N3 A A1029 42.774 96.658 91.300 1.00 39.02 N
ATOM 23 C4 A A1029 41.582 97.059 91.768 1.00 38.54 C
ATOM 24 P G A1030 40.555 102.987 89.626 1.00 38.89 P
ATOM 25 OP1 G A1030 41.263 102.142 88.623 1.00 36.90 O
ATOM 26 OP2 G A1030 40.510 104.460 89.447 1.00 38.30 O
ATOM 27 O5' G A1030 39.057 102.485 89.782 1.00 39.65 O
TER

ATOM 1 O3' A B 900 46.948 89.367 85.294 1.00 36.20 O
ATOM 2 P A B 901 47.537 89.181 86.769 1.00 36.51 P
ATOM 3 OP1 A B 901 48.120 87.826 86.855 1.00 34.61 O
ATOM 4 OP2 A B 901 46.495 89.606 87.740 1.00 34.08 O
ATOM 5 O5' A B 901 48.699 90.263 86.823 1.00 35.95 O
ATOM 6 C5' A B 901 48.987 90.999 88.021 1.00 35.69 C
ATOM 7 C4' A B 901 49.584 92.339 87.664 1.00 35.35 C
ATOM 8 O4' A B 901 48.522 93.249 87.273 1.00 34.44 O
ATOM 9 C3' A B 901 50.285 93.071 88.794 1.00 34.65 C
ATOM 10 O3' A B 901 51.621 92.587 88.934 1.00 33.65 O
ATOM 11 C2' A B 901 50.259 94.513 88.302 1.00 34.68 C
ATOM 12 O2' A B 901 51.269 94.780 87.350 1.00 33.93 O
ATOM 13 C1' A B 901 48.902 94.574 87.592 1.00 34.39 C
ATOM 14 N9 A B 901 47.835 95.193 88.375 1.00 35.14 N
ATOM 15 C8 A B 901 46.752 94.592 88.961 1.00 36.35 C
ATOM 16 N7 A B 901 45.954 95.427 89.578 1.00 35.55 N
ATOM 17 C5 A B 901 46.557 96.659 89.392 1.00 34.46 C
ATOM 18 C6 A B 901 46.194 97.951 89.787 1.00 35.82 C
ATOM 19 N6 A B 901 45.092 98.230 90.486 1.00 35.33 N
ATOM 20 N1 A B 901 47.008 98.966 89.430 1.00 36.90 N
ATOM 21 C2 A B 901 48.106 98.682 88.720 1.00 36.66 C
ATOM 22 N3 A B 901 48.548 97.511 88.288 1.00 33.05 N
ATOM 23 C4 A B 901 47.719 96.530 88.659 1.00 34.02 C
ATOM 24 P C B 902 52.027 91.685 90.206 1.00 35.37 P
ATOM 25 OP1 C B 902 51.018 91.895 91.290 1.00 35.37 O
ATOM 26 OP2 C B 902 53.467 91.954 90.487 1.00 34.39 O
ATOM 27 O5' C B 902 51.875 90.180 89.689 1.00 32.56 O
TER

Atoms:
OP1: (37.023,102.190,94.312)
OP2: (36.643,99.735,93.715)
C3': (41.000,101.374,91.620)
C1': (42.127,99.452,92.393)
C5': (39.919,101.768,93.879)
O4': (41.699,100.182,93.528)
C8: (39.927,98.217,92.610)
O2': (43.357,100.970,91.034)
C6: (40.508,95.000,91.404)
C5: (40.436,96.306,91.851)
C4: (41.582,97.059,91.768)
P: (37.497,100.786,94.303)
C4': (41.189,101.474,93.120)
C2': (42.083,100.394,91.192)
C2: (42.718,95.401,90.904)
N1: (41.690,94.562,90.923)
N3: (42.774,96.658,91.300)
N6: (39.470,94.167,91.429)
N7: (39.395,97.046,92.386)
N9: (41.250,98.295,92.261)
O5': (38.940,100.732,93.631)
O3': (41.179,102.655,91.058)
OP1: (48.120,87.826,86.855)
OP2: (46.495,89.606,87.740)
C3': (50.285,93.071,88.794)
C1': (48.902,94.574,87.592)
C5': (48.987,90.999,88.021)
O4': (48.522,93.249,87.273)
C8: (46.752,94.592,88.961)
O2': (51.269,94.780,87.350)
C6: (46.194,97.951,89.787)
C5: (46.557,96.659,89.392)
C4: (47.719,96.530,88.659)
P: (47.537,89.181,86.769)
C4': (49.584,92.339,87.664)
C2': (50.259,94.513,88.302)
C2: (48.106,98.682,88.720)
N1: (47.008,98.966,89.430)
N3: (48.548,97.511,88.288)
N6: (45.092,98.230,90.486)
N7: (45.954,95.427,89.578)
N9: (47.835,95.193,88.375)
O5': (48.699,90.263,86.823)
O3': (51.621,92.587,88.934)
Image (generated by PyMOL):
PyMOL image
show in jmol