Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01029:0901
Extra
PDB:
ATOM 1 O3' C A1028 37.513 100.212 95.460 1.00 31.81 O
ATOM 2 P A A1029 37.186 100.604 93.940 1.00 32.33 P
ATOM 3 OP1 A A1029 36.620 101.970 93.973 1.00 30.47 O
ATOM 4 OP2 A A1029 36.400 99.513 93.324 1.00 32.54 O
ATOM 5 O5' A A1029 38.616 100.610 93.229 1.00 31.66 O
ATOM 6 C5' A A1029 39.611 101.623 93.509 1.00 30.45 C
ATOM 7 C4' A A1029 40.892 101.307 92.766 1.00 30.86 C
ATOM 8 O4' A A1029 41.362 99.995 93.163 1.00 32.26 O
ATOM 9 C3' A A1029 40.736 101.238 91.258 1.00 31.01 C
ATOM 10 O3' A A1029 40.961 102.527 90.715 1.00 31.45 O
ATOM 11 C2' A A1029 41.805 100.240 90.832 1.00 31.45 C
ATOM 12 O2' A A1029 43.077 100.815 90.658 1.00 31.27 O
ATOM 13 C1' A A1029 41.835 99.285 92.028 1.00 32.97 C
ATOM 14 N9 A A1029 41.012 98.082 91.869 1.00 33.61 N
ATOM 15 C8 A A1029 39.685 97.935 92.192 1.00 35.11 C
ATOM 16 N7 A A1029 39.212 96.744 91.944 1.00 35.78 N
ATOM 17 C5 A A1029 40.299 96.057 91.426 1.00 33.87 C
ATOM 18 C6 A A1029 40.445 94.743 90.972 1.00 34.71 C
ATOM 19 N6 A A1029 39.459 93.847 90.988 1.00 35.79 N
ATOM 20 N1 A A1029 41.654 94.370 90.503 1.00 34.62 N
ATOM 21 C2 A A1029 42.641 95.265 90.510 1.00 33.84 C
ATOM 22 N3 A A1029 42.628 96.528 90.924 1.00 33.58 N
ATOM 23 C4 A A1029 41.411 96.867 91.372 1.00 32.26 C
ATOM 24 P G A1030 40.299 102.939 89.318 1.00 32.84 P
ATOM 25 OP1 G A1030 41.069 102.293 88.229 1.00 29.67 O
ATOM 26 OP2 G A1030 40.113 104.419 89.326 1.00 29.57 O
ATOM 27 O5' G A1030 38.863 102.268 89.362 1.00 33.59 O
TER
ATOM 1 O3' A B 900 46.752 89.118 84.929 1.00 30.43 O
ATOM 2 P A B 901 47.350 88.964 86.404 1.00 30.34 P
ATOM 3 OP1 A B 901 47.923 87.612 86.494 1.00 30.36 O
ATOM 4 OP2 A B 901 46.307 89.385 87.362 1.00 29.97 O
ATOM 5 O5' A B 901 48.501 90.065 86.439 1.00 32.60 O
ATOM 6 C5' A B 901 48.831 90.796 87.642 1.00 33.07 C
ATOM 7 C4' A B 901 49.450 92.139 87.289 1.00 33.75 C
ATOM 8 O4' A B 901 48.409 93.076 86.897 1.00 33.18 O
ATOM 9 C3' A B 901 50.142 92.858 88.434 1.00 33.79 C
ATOM 10 O3' A B 901 51.470 92.371 88.602 1.00 33.94 O
ATOM 11 C2' A B 901 50.145 94.307 87.961 1.00 33.36 C
ATOM 12 O2' A B 901 51.180 94.565 87.036 1.00 34.18 O
ATOM 13 C1' A B 901 48.805 94.395 87.229 1.00 32.47 C
ATOM 14 N9 A B 901 47.726 95.052 87.969 1.00 32.83 N
ATOM 15 C8 A B 901 46.583 94.491 88.476 1.00 34.66 C
ATOM 16 N7 A B 901 45.779 95.352 89.055 1.00 34.18 N
ATOM 17 C5 A B 901 46.440 96.562 88.928 1.00 33.60 C
ATOM 18 C6 A B 901 46.102 97.870 89.318 1.00 33.46 C
ATOM 19 N6 A B 901 44.967 98.193 89.943 1.00 30.04 N
ATOM 20 N1 A B 901 46.982 98.854 89.034 1.00 34.86 N
ATOM 21 C2 A B 901 48.118 98.534 88.401 1.00 35.52 C
ATOM 22 N3 A B 901 48.545 97.346 87.982 1.00 34.53 N
ATOM 23 C4 A B 901 47.649 96.391 88.274 1.00 33.57 C
ATOM 24 P C B 902 51.860 91.551 89.929 1.00 35.06 P
ATOM 25 OP1 C B 902 50.841 91.869 90.971 1.00 33.98 O
ATOM 26 OP2 C B 902 53.296 91.822 90.215 1.00 34.26 O
ATOM 27 O5' C B 902 51.720 90.026 89.473 1.00 30.43 O
TER
ATOM 2 P A A1029 37.186 100.604 93.940 1.00 32.33 P
ATOM 3 OP1 A A1029 36.620 101.970 93.973 1.00 30.47 O
ATOM 4 OP2 A A1029 36.400 99.513 93.324 1.00 32.54 O
ATOM 5 O5' A A1029 38.616 100.610 93.229 1.00 31.66 O
ATOM 6 C5' A A1029 39.611 101.623 93.509 1.00 30.45 C
ATOM 7 C4' A A1029 40.892 101.307 92.766 1.00 30.86 C
ATOM 8 O4' A A1029 41.362 99.995 93.163 1.00 32.26 O
ATOM 9 C3' A A1029 40.736 101.238 91.258 1.00 31.01 C
ATOM 10 O3' A A1029 40.961 102.527 90.715 1.00 31.45 O
ATOM 11 C2' A A1029 41.805 100.240 90.832 1.00 31.45 C
ATOM 12 O2' A A1029 43.077 100.815 90.658 1.00 31.27 O
ATOM 13 C1' A A1029 41.835 99.285 92.028 1.00 32.97 C
ATOM 14 N9 A A1029 41.012 98.082 91.869 1.00 33.61 N
ATOM 15 C8 A A1029 39.685 97.935 92.192 1.00 35.11 C
ATOM 16 N7 A A1029 39.212 96.744 91.944 1.00 35.78 N
ATOM 17 C5 A A1029 40.299 96.057 91.426 1.00 33.87 C
ATOM 18 C6 A A1029 40.445 94.743 90.972 1.00 34.71 C
ATOM 19 N6 A A1029 39.459 93.847 90.988 1.00 35.79 N
ATOM 20 N1 A A1029 41.654 94.370 90.503 1.00 34.62 N
ATOM 21 C2 A A1029 42.641 95.265 90.510 1.00 33.84 C
ATOM 22 N3 A A1029 42.628 96.528 90.924 1.00 33.58 N
ATOM 23 C4 A A1029 41.411 96.867 91.372 1.00 32.26 C
ATOM 24 P G A1030 40.299 102.939 89.318 1.00 32.84 P
ATOM 25 OP1 G A1030 41.069 102.293 88.229 1.00 29.67 O
ATOM 26 OP2 G A1030 40.113 104.419 89.326 1.00 29.57 O
ATOM 27 O5' G A1030 38.863 102.268 89.362 1.00 33.59 O
TER
ATOM 1 O3' A B 900 46.752 89.118 84.929 1.00 30.43 O
ATOM 2 P A B 901 47.350 88.964 86.404 1.00 30.34 P
ATOM 3 OP1 A B 901 47.923 87.612 86.494 1.00 30.36 O
ATOM 4 OP2 A B 901 46.307 89.385 87.362 1.00 29.97 O
ATOM 5 O5' A B 901 48.501 90.065 86.439 1.00 32.60 O
ATOM 6 C5' A B 901 48.831 90.796 87.642 1.00 33.07 C
ATOM 7 C4' A B 901 49.450 92.139 87.289 1.00 33.75 C
ATOM 8 O4' A B 901 48.409 93.076 86.897 1.00 33.18 O
ATOM 9 C3' A B 901 50.142 92.858 88.434 1.00 33.79 C
ATOM 10 O3' A B 901 51.470 92.371 88.602 1.00 33.94 O
ATOM 11 C2' A B 901 50.145 94.307 87.961 1.00 33.36 C
ATOM 12 O2' A B 901 51.180 94.565 87.036 1.00 34.18 O
ATOM 13 C1' A B 901 48.805 94.395 87.229 1.00 32.47 C
ATOM 14 N9 A B 901 47.726 95.052 87.969 1.00 32.83 N
ATOM 15 C8 A B 901 46.583 94.491 88.476 1.00 34.66 C
ATOM 16 N7 A B 901 45.779 95.352 89.055 1.00 34.18 N
ATOM 17 C5 A B 901 46.440 96.562 88.928 1.00 33.60 C
ATOM 18 C6 A B 901 46.102 97.870 89.318 1.00 33.46 C
ATOM 19 N6 A B 901 44.967 98.193 89.943 1.00 30.04 N
ATOM 20 N1 A B 901 46.982 98.854 89.034 1.00 34.86 N
ATOM 21 C2 A B 901 48.118 98.534 88.401 1.00 35.52 C
ATOM 22 N3 A B 901 48.545 97.346 87.982 1.00 34.53 N
ATOM 23 C4 A B 901 47.649 96.391 88.274 1.00 33.57 C
ATOM 24 P C B 902 51.860 91.551 89.929 1.00 35.06 P
ATOM 25 OP1 C B 902 50.841 91.869 90.971 1.00 33.98 O
ATOM 26 OP2 C B 902 53.296 91.822 90.215 1.00 34.26 O
ATOM 27 O5' C B 902 51.720 90.026 89.473 1.00 30.43 O
TER
Atoms:
OP1: (36.620,101.970,93.973)
OP2: (36.400,99.513,93.324)
C3': (40.736,101.238,91.258)
C1': (41.835,99.285,92.028)
C5': (39.611,101.623,93.509)
O4': (41.362,99.995,93.163)
C8: (39.685,97.935,92.192)
O2': (43.077,100.815,90.658)
C6: (40.445,94.743,90.972)
C5: (40.299,96.057,91.426)
C4: (41.411,96.867,91.372)
P: (37.186,100.604,93.940)
C4': (40.892,101.307,92.766)
C2': (41.805,100.240,90.832)
C2: (42.641,95.265,90.510)
N1: (41.654,94.370,90.503)
N3: (42.628,96.528,90.924)
N6: (39.459,93.847,90.988)
N7: (39.212,96.744,91.944)
N9: (41.012,98.082,91.869)
O5': (38.616,100.610,93.229)
O3': (40.961,102.527,90.715)
OP2: (36.400,99.513,93.324)
C3': (40.736,101.238,91.258)
C1': (41.835,99.285,92.028)
C5': (39.611,101.623,93.509)
O4': (41.362,99.995,93.163)
C8: (39.685,97.935,92.192)
O2': (43.077,100.815,90.658)
C6: (40.445,94.743,90.972)
C5: (40.299,96.057,91.426)
C4: (41.411,96.867,91.372)
P: (37.186,100.604,93.940)
C4': (40.892,101.307,92.766)
C2': (41.805,100.240,90.832)
C2: (42.641,95.265,90.510)
N1: (41.654,94.370,90.503)
N3: (42.628,96.528,90.924)
N6: (39.459,93.847,90.988)
N7: (39.212,96.744,91.944)
N9: (41.012,98.082,91.869)
O5': (38.616,100.610,93.229)
O3': (40.961,102.527,90.715)
OP1: (47.923,87.612,86.494)
OP2: (46.307,89.385,87.362)
C3': (50.142,92.858,88.434)
C1': (48.805,94.395,87.229)
C5': (48.831,90.796,87.642)
O4': (48.409,93.076,86.897)
C8: (46.583,94.491,88.476)
O2': (51.180,94.565,87.036)
C6: (46.102,97.870,89.318)
C5: (46.440,96.562,88.928)
C4: (47.649,96.391,88.274)
P: (47.350,88.964,86.404)
C4': (49.450,92.139,87.289)
C2': (50.145,94.307,87.961)
C2: (48.118,98.534,88.401)
N1: (46.982,98.854,89.034)
N3: (48.545,97.346,87.982)
N6: (44.967,98.193,89.943)
N7: (45.779,95.352,89.055)
N9: (47.726,95.052,87.969)
O5': (48.501,90.065,86.439)
O3': (51.470,92.371,88.602)
OP2: (46.307,89.385,87.362)
C3': (50.142,92.858,88.434)
C1': (48.805,94.395,87.229)
C5': (48.831,90.796,87.642)
O4': (48.409,93.076,86.897)
C8: (46.583,94.491,88.476)
O2': (51.180,94.565,87.036)
C6: (46.102,97.870,89.318)
C5: (46.440,96.562,88.928)
C4: (47.649,96.391,88.274)
P: (47.350,88.964,86.404)
C4': (49.450,92.139,87.289)
C2': (50.145,94.307,87.961)
C2: (48.118,98.534,88.401)
N1: (46.982,98.854,89.034)
N3: (48.545,97.346,87.982)
N6: (44.967,98.193,89.943)
N7: (45.779,95.352,89.055)
N9: (47.726,95.052,87.969)
O5': (48.501,90.065,86.439)
O3': (51.470,92.371,88.602)
Image (generated by PyMOL):