Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R104:R12
Extra
PDB:
ATOM 1 O3' U A 103 47.616 -43.019 18.545 1.00 64.70 O
ATOM 2 P A A 104 49.035 -42.474 18.027 1.00 69.01 P
ATOM 3 OP1 A A 104 49.425 -43.284 16.850 1.00 70.97 O
ATOM 4 OP2 A A 104 49.963 -42.340 19.172 1.00 69.14 O
ATOM 5 O5' A A 104 48.665 -41.004 17.534 1.00 68.43 O
ATOM 6 C5' A A 104 47.788 -40.844 16.434 1.00 67.58 C
ATOM 7 C4' A A 104 47.610 -39.375 16.124 1.00 67.47 C
ATOM 8 O4' A A 104 46.904 -38.746 17.221 1.00 66.81 O
ATOM 9 C3' A A 104 48.893 -38.568 15.972 1.00 68.02 C
ATOM 10 O3' A A 104 49.422 -38.737 14.650 1.00 71.66 O
ATOM 11 C2' A A 104 48.369 -37.165 16.252 1.00 67.24 C
ATOM 12 O2' A A 104 47.715 -36.613 15.122 1.00 69.74 O
ATOM 13 C1' A A 104 47.338 -37.400 17.355 1.00 63.75 C
ATOM 14 N9 A A 104 47.750 -37.209 18.750 1.00 61.66 N
ATOM 15 C8 A A 104 48.349 -38.117 19.582 1.00 61.30 C
ATOM 16 N7 A A 104 48.572 -37.667 20.797 1.00 59.66 N
ATOM 17 C5 A A 104 48.070 -36.380 20.762 1.00 58.92 C
ATOM 18 C6 A A 104 47.997 -35.367 21.736 1.00 60.23 C
ATOM 19 N6 A A 104 48.455 -35.520 22.980 1.00 60.47 N
ATOM 20 N1 A A 104 47.441 -34.189 21.381 1.00 60.42 N
ATOM 21 C2 A A 104 46.982 -34.044 20.130 1.00 60.20 C
ATOM 22 N3 A A 104 46.996 -34.927 19.127 1.00 59.03 N
ATOM 23 C4 A A 104 47.555 -36.084 19.513 1.00 59.53 C
ATOM 24 P A A 105 50.667 -37.898 14.071 1.00 73.67 P
ATOM 25 OP1 A A 105 51.379 -38.790 13.127 1.00 73.24 O
ATOM 26 OP2 A A 105 51.402 -37.247 15.182 1.00 72.29 O
ATOM 27 O5' A A 105 49.956 -36.743 13.225 1.00 69.81 O
TER
ATOM 1 O3' A B 11 46.903 -27.950 21.792 1.00 51.31 O
ATOM 2 P A B 12 45.456 -28.578 21.996 1.00 51.58 P
ATOM 3 OP1 A B 12 44.785 -27.730 23.006 1.00 50.30 O
ATOM 4 OP2 A B 12 45.564 -30.043 22.181 1.00 48.87 O
ATOM 5 O5' A B 12 44.803 -28.336 20.558 1.00 55.38 O
ATOM 6 C5' A B 12 44.643 -27.015 20.045 1.00 56.56 C
ATOM 7 C4' A B 12 44.099 -27.079 18.632 1.00 57.73 C
ATOM 8 O4' A B 12 45.060 -27.708 17.749 1.00 56.41 O
ATOM 9 C3' A B 12 42.851 -27.930 18.477 1.00 59.20 C
ATOM 10 O3' A B 12 41.693 -27.203 18.878 1.00 62.44 O
ATOM 11 C2' A B 12 42.901 -28.245 16.990 1.00 58.69 C
ATOM 12 O2' A B 12 42.502 -27.150 16.188 1.00 59.40 O
ATOM 13 C1' A B 12 44.388 -28.527 16.806 1.00 56.04 C
ATOM 14 N9 A B 12 44.815 -29.916 16.989 1.00 55.46 N
ATOM 15 C8 A B 12 45.546 -30.433 18.027 1.00 55.07 C
ATOM 16 N7 A B 12 45.803 -31.713 17.914 1.00 54.35 N
ATOM 17 C5 A B 12 45.208 -32.068 16.721 1.00 53.37 C
ATOM 18 C6 A B 12 45.123 -33.300 16.036 1.00 55.03 C
ATOM 19 N6 A B 12 45.666 -34.431 16.495 1.00 54.02 N
ATOM 20 N1 A B 12 44.450 -33.324 14.862 1.00 54.83 N
ATOM 21 C2 A B 12 43.907 -32.182 14.412 1.00 54.61 C
ATOM 22 N3 A B 12 43.920 -30.965 14.967 1.00 54.79 N
ATOM 23 C4 A B 12 44.592 -30.975 16.135 1.00 54.86 C
ATOM 24 P A B 13 40.488 -27.965 19.605 1.00 63.07 P
ATOM 25 OP1 A B 13 39.433 -26.962 19.877 1.00 65.74 O
ATOM 26 OP2 A B 13 41.040 -28.792 20.700 1.00 62.87 O
ATOM 27 O5' A B 13 39.986 -28.978 18.473 1.00 65.72 O
TER
ATOM 2 P A A 104 49.035 -42.474 18.027 1.00 69.01 P
ATOM 3 OP1 A A 104 49.425 -43.284 16.850 1.00 70.97 O
ATOM 4 OP2 A A 104 49.963 -42.340 19.172 1.00 69.14 O
ATOM 5 O5' A A 104 48.665 -41.004 17.534 1.00 68.43 O
ATOM 6 C5' A A 104 47.788 -40.844 16.434 1.00 67.58 C
ATOM 7 C4' A A 104 47.610 -39.375 16.124 1.00 67.47 C
ATOM 8 O4' A A 104 46.904 -38.746 17.221 1.00 66.81 O
ATOM 9 C3' A A 104 48.893 -38.568 15.972 1.00 68.02 C
ATOM 10 O3' A A 104 49.422 -38.737 14.650 1.00 71.66 O
ATOM 11 C2' A A 104 48.369 -37.165 16.252 1.00 67.24 C
ATOM 12 O2' A A 104 47.715 -36.613 15.122 1.00 69.74 O
ATOM 13 C1' A A 104 47.338 -37.400 17.355 1.00 63.75 C
ATOM 14 N9 A A 104 47.750 -37.209 18.750 1.00 61.66 N
ATOM 15 C8 A A 104 48.349 -38.117 19.582 1.00 61.30 C
ATOM 16 N7 A A 104 48.572 -37.667 20.797 1.00 59.66 N
ATOM 17 C5 A A 104 48.070 -36.380 20.762 1.00 58.92 C
ATOM 18 C6 A A 104 47.997 -35.367 21.736 1.00 60.23 C
ATOM 19 N6 A A 104 48.455 -35.520 22.980 1.00 60.47 N
ATOM 20 N1 A A 104 47.441 -34.189 21.381 1.00 60.42 N
ATOM 21 C2 A A 104 46.982 -34.044 20.130 1.00 60.20 C
ATOM 22 N3 A A 104 46.996 -34.927 19.127 1.00 59.03 N
ATOM 23 C4 A A 104 47.555 -36.084 19.513 1.00 59.53 C
ATOM 24 P A A 105 50.667 -37.898 14.071 1.00 73.67 P
ATOM 25 OP1 A A 105 51.379 -38.790 13.127 1.00 73.24 O
ATOM 26 OP2 A A 105 51.402 -37.247 15.182 1.00 72.29 O
ATOM 27 O5' A A 105 49.956 -36.743 13.225 1.00 69.81 O
TER
ATOM 1 O3' A B 11 46.903 -27.950 21.792 1.00 51.31 O
ATOM 2 P A B 12 45.456 -28.578 21.996 1.00 51.58 P
ATOM 3 OP1 A B 12 44.785 -27.730 23.006 1.00 50.30 O
ATOM 4 OP2 A B 12 45.564 -30.043 22.181 1.00 48.87 O
ATOM 5 O5' A B 12 44.803 -28.336 20.558 1.00 55.38 O
ATOM 6 C5' A B 12 44.643 -27.015 20.045 1.00 56.56 C
ATOM 7 C4' A B 12 44.099 -27.079 18.632 1.00 57.73 C
ATOM 8 O4' A B 12 45.060 -27.708 17.749 1.00 56.41 O
ATOM 9 C3' A B 12 42.851 -27.930 18.477 1.00 59.20 C
ATOM 10 O3' A B 12 41.693 -27.203 18.878 1.00 62.44 O
ATOM 11 C2' A B 12 42.901 -28.245 16.990 1.00 58.69 C
ATOM 12 O2' A B 12 42.502 -27.150 16.188 1.00 59.40 O
ATOM 13 C1' A B 12 44.388 -28.527 16.806 1.00 56.04 C
ATOM 14 N9 A B 12 44.815 -29.916 16.989 1.00 55.46 N
ATOM 15 C8 A B 12 45.546 -30.433 18.027 1.00 55.07 C
ATOM 16 N7 A B 12 45.803 -31.713 17.914 1.00 54.35 N
ATOM 17 C5 A B 12 45.208 -32.068 16.721 1.00 53.37 C
ATOM 18 C6 A B 12 45.123 -33.300 16.036 1.00 55.03 C
ATOM 19 N6 A B 12 45.666 -34.431 16.495 1.00 54.02 N
ATOM 20 N1 A B 12 44.450 -33.324 14.862 1.00 54.83 N
ATOM 21 C2 A B 12 43.907 -32.182 14.412 1.00 54.61 C
ATOM 22 N3 A B 12 43.920 -30.965 14.967 1.00 54.79 N
ATOM 23 C4 A B 12 44.592 -30.975 16.135 1.00 54.86 C
ATOM 24 P A B 13 40.488 -27.965 19.605 1.00 63.07 P
ATOM 25 OP1 A B 13 39.433 -26.962 19.877 1.00 65.74 O
ATOM 26 OP2 A B 13 41.040 -28.792 20.700 1.00 62.87 O
ATOM 27 O5' A B 13 39.986 -28.978 18.473 1.00 65.72 O
TER
Atoms:
OP1: (49.425,-43.284,16.850)
OP2: (49.963,-42.340,19.172)
C3': (48.893,-38.568,15.972)
C1': (47.338,-37.400,17.355)
C5': (47.788,-40.844,16.434)
O4': (46.904,-38.746,17.221)
C8: (48.349,-38.117,19.582)
O2': (47.715,-36.613,15.122)
C6: (47.997,-35.367,21.736)
C5: (48.070,-36.380,20.762)
C4: (47.555,-36.084,19.513)
P: (49.035,-42.474,18.027)
C4': (47.610,-39.375,16.124)
C2': (48.369,-37.165,16.252)
C2: (46.982,-34.044,20.130)
N1: (47.441,-34.189,21.381)
N3: (46.996,-34.927,19.127)
N6: (48.455,-35.520,22.980)
N7: (48.572,-37.667,20.797)
N9: (47.750,-37.209,18.750)
O5': (48.665,-41.004,17.534)
O3': (49.422,-38.737,14.650)
OP2: (49.963,-42.340,19.172)
C3': (48.893,-38.568,15.972)
C1': (47.338,-37.400,17.355)
C5': (47.788,-40.844,16.434)
O4': (46.904,-38.746,17.221)
C8: (48.349,-38.117,19.582)
O2': (47.715,-36.613,15.122)
C6: (47.997,-35.367,21.736)
C5: (48.070,-36.380,20.762)
C4: (47.555,-36.084,19.513)
P: (49.035,-42.474,18.027)
C4': (47.610,-39.375,16.124)
C2': (48.369,-37.165,16.252)
C2: (46.982,-34.044,20.130)
N1: (47.441,-34.189,21.381)
N3: (46.996,-34.927,19.127)
N6: (48.455,-35.520,22.980)
N7: (48.572,-37.667,20.797)
N9: (47.750,-37.209,18.750)
O5': (48.665,-41.004,17.534)
O3': (49.422,-38.737,14.650)
OP1: (44.785,-27.730,23.006)
OP2: (45.564,-30.043,22.181)
C3': (42.851,-27.930,18.477)
C1': (44.388,-28.527,16.806)
C5': (44.643,-27.015,20.045)
O4': (45.060,-27.708,17.749)
C8: (45.546,-30.433,18.027)
O2': (42.502,-27.150,16.188)
C6: (45.123,-33.300,16.036)
C5: (45.208,-32.068,16.721)
C4: (44.592,-30.975,16.135)
P: (45.456,-28.578,21.996)
C4': (44.099,-27.079,18.632)
C2': (42.901,-28.245,16.990)
C2: (43.907,-32.182,14.412)
N1: (44.450,-33.324,14.862)
N3: (43.920,-30.965,14.967)
N6: (45.666,-34.431,16.495)
N7: (45.803,-31.713,17.914)
N9: (44.815,-29.916,16.989)
O5': (44.803,-28.336,20.558)
O3': (41.693,-27.203,18.878)
OP2: (45.564,-30.043,22.181)
C3': (42.851,-27.930,18.477)
C1': (44.388,-28.527,16.806)
C5': (44.643,-27.015,20.045)
O4': (45.060,-27.708,17.749)
C8: (45.546,-30.433,18.027)
O2': (42.502,-27.150,16.188)
C6: (45.123,-33.300,16.036)
C5: (45.208,-32.068,16.721)
C4: (44.592,-30.975,16.135)
P: (45.456,-28.578,21.996)
C4': (44.099,-27.079,18.632)
C2': (42.901,-28.245,16.990)
C2: (43.907,-32.182,14.412)
N1: (44.450,-33.324,14.862)
N3: (43.920,-30.965,14.967)
N6: (45.666,-34.431,16.495)
N7: (45.803,-31.713,17.914)
N9: (44.815,-29.916,16.989)
O5': (44.803,-28.336,20.558)
O3': (41.693,-27.203,18.878)
Image (generated by PyMOL):